Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.1e-167 593.2 293 100.0
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.6e-124 449.1 292 78.4
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 2.8e-123 445.7 295 81.0
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 8.5e-120 434.1 322 73.6
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 3.7e-115 418.7 294 76.9
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 2.9e-112 409.1 261 83.9
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 6.5e-112 407.9 293 75.4
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 8.5e-112 407.5 291 74.9
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 8.0e-110 401.0 296 74.0
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.4e-109 400.2 292 74.0
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 3.8e-104 382.1 265 77.4
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 2.7e-102 375.9 287 72.8
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 2.6e-100 369.4 293 69.6
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.3e-99 367.1 293 70.0
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.3e-99 364.8 214 85.5
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 1.4e-98 363.6 292 69.2
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 1.2e-97 360.5 289 70.9
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 2.0e-97 359.8 273 73.3
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 5.9e-97 358.2 332 62.3
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 1.6e-94 350.1 252 71.4
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 4.7e-94 348.6 296 66.9
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 5.2e-93 345.1 300 66.0
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 5.2e-93 345.1 300 65.7
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.4e-92 342.0 270 70.7
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 4.9e-91 338.6 296 65.5
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 4.9e-91 338.6 296 65.5
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 4.9e-91 338.6 296 65.5
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 4.9e-91 338.6 296 65.5
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 1.4e-90 337.0 283 67.8
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 1.8e-90 336.7 296 65.5
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 3.1e-90 335.9 198 86.9
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 1.2e-89 334.0 218 77.1
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.0e-89 333.2 296 65.2
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 2.7e-89 332.8 300 65.0
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 2.9e-88 329.3 291 67.4
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 3.1e-85 319.3 283 65.4
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 5.8e-84 315.1 297 63.0
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 9.8e-84 314.3 294 62.9
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-80 303.1 280 64.3
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 8.6e-80 301.2 280 63.9
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 3.7e-75 285.8 166 85.5
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 4.6e-73 278.9 243 66.3
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 6.0e-73 278.5 275 60.0
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 3.3e-71 272.7 208 70.7
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.2e-70 268.5 204 74.0
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 5.2e-69 265.4 268 57.5
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 6.8e-69 265.0 221 70.6
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 8.9e-69 264.6 268 59.0
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-68 263.8 271 59.4
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-68 262.7 285 57.5
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 4.4e-68 262.3 214 68.7
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 4.4e-68 262.3 229 65.5
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 5.8e-68 261.9 304 56.6
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 1.7e-67 260.4 154 82.5
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-65 253.8 266 56.4
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 7.8e-65 251.5 295 53.6
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 3.0e-64 249.6 476 39.5
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 5.1e-64 248.8 280 56.1
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 1.5e-63 247.3 205 65.4
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 4.3e-63 245.7 214 64.0
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-62 243.8 208 64.4
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 3.6e-62 242.7 214 63.6
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-61 240.7 166 76.5
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-61 240.7 177 73.4
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-61 240.0 268 53.7
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.8e-61 238.4 160 77.5
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 1.5e-60 237.3 158 81.6
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 8.4e-59 231.5 248 53.6
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-58 231.1 166 72.3
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 7.8e-57 224.9 246 55.7
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 3.0e-56 223.0 272 48.5
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.9e-51 206.5 215 58.6
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.9e-51 205.7 263 51.3
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-50 203.4 256 52.3
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-50 202.6 154 71.4
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-50 201.4 255 53.3
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-49 199.5 214 56.1
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 1.3e-48 197.6 276 50.0
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 3.3e-47 193.0 160 65.0
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 9.6e-47 191.4 163 65.6
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.4e-45 187.6 174 61.5
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 3.4e-44 183.0 204 54.4
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 3.8e-43 179.5 166 61.4
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 6.0e-41 172.2 292 39.4
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 2.3e-40 170.2 136 69.9
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-40 168.3 222 50.0
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 3.3e-39 166.4 281 40.9
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 4.8e-38 162.5 294 44.2
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-37 160.6 138 63.8
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 5.3e-37 159.1 293 39.6
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 2.6e-36 156.8 172 54.7
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 5.8e-36 155.6 178 54.5
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.0e-35 154.8 280 42.5
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.0e-35 154.8 280 42.5
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.9e-34 150.6 280 42.1
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-34 149.8 160 58.1
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 5.5e-34 149.1 232 47.4
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 7.1e-34 148.7 214 47.2
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 1.2e-33 147.9 293 36.9
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 6.7e-32 142.1 125 64.8
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-32 141.7 154 57.8
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 9.6e-31 138.3 289 42.6
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 4.8e-30 136.0 260 43.5
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 4.8e-30 136.0 276 40.2
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.4e-29 134.4 207 43.5
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 5.3e-29 132.5 263 35.7
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 9.0e-29 131.7 228 39.5
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.2e-28 131.3 287 37.6
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-28 131.3 114 64.0
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 1.5e-28 131.0 286 36.7
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.5e-28 131.0 117 58.1
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 2.6e-28 130.2 282 35.5
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 1.0e-27 128.3 254 37.0
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-26 124.8 127 59.1
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-26 124.8 88 71.6
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-26 124.4 88 70.5
Solyc02g092280.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.8e-24 117.5 74 78.4
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 5.7e-23 112.5 73 75.3
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 2.2e-22 110.5 224 37.5
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 2.8e-22 110.2 249 32.9
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 3.7e-22 109.8 83 66.3
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 6.3e-22 109.0 115 57.4
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 5.3e-21 105.9 215 39.5
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 6.9e-21 105.5 105 59.0
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 9.0e-21 105.1 79 68.4
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 7.7e-20 102.1 140 44.3
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-19 101.3 228 37.3
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 1.7e-19 100.9 102 59.8
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 1.7e-19 100.9 102 59.8
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 2.9e-19 100.1 219 39.3
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 8.5e-19 98.6 112 54.5
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 8.5e-19 98.6 220 38.6
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 2.5e-18 97.1 104 60.6
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.2e-18 96.7 59 79.7
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 9.4e-18 95.1 187 32.1
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 9.4e-18 95.1 217 36.9
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 1.6e-17 94.4 220 37.7
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 2.1e-17 94.0 187 32.6
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 1.8e-16 90.9 109 45.0
Lsat_1_v5_gn_5_28101 Lactuca sativa HOM05D003467 ORTHO05D004220 1.8e-16 90.9 277 33.2
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 1.8e-16 90.9 217 36.4
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 3.0e-16 90.1 219 36.5
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 3.9e-16 89.7 59 72.9
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 3.3e-15 86.7 53 75.5
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.7e-15 85.9 79 64.6
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.2e-14 84.0 53 75.5
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 3.1e-13 80.1 93 50.5
Nitab4.5_0002558g0130 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.3e-13 79.3 52 82.7
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 6.9e-13 79.0 225 34.7
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.2e-12 78.2 107 45.8
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 7.7e-12 75.5 209 32.1
SalBow1G8419 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.0e-11 75.1 185 36.8
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 5.0e-11 72.8 174 36.2
Lsat_1_v5_gn_3_81380 Lactuca sativa HOM05D003467 ORTHO05D004220 6.5e-11 72.4 132 39.4
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 8.5e-11 72.0 91 51.6
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 2.5e-10 70.5 187 36.9
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-09 68.2 88 51.1
Atru.chr10.2290 Acer truncatum HOM05D003467 ORTHO05D004220 1.0e-08 65.1 49 75.5
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.3e-08 63.9 61 59.0
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 3.0e-08 63.5 40 87.5
unitig_22.g5752 Utricularia gibba HOM05D003467 ORTHO05D004220 3.0e-08 63.5 111 44.1
Lsat_1_v5_gn_3_11941 Lactuca sativa HOM05D003467 ORTHO05D004220 2.0e-07 60.8 50 64.0
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 2.6e-07 60.5 169 37.9
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 3.3e-07 60.1 53 60.4
Nitab4.5_0004099g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.3e-07 60.1 57 57.9
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 4.4e-07 59.7 195 32.3
CAN.G993.9 Capsicum annuum HOM05D003467 ORTHO05D008105 9.7e-07 58.5 37 83.8
TPR.G9704 Trifolium pratense HOM05D003467 ORTHO05D004220 1.3e-06 58.2 81 43.2
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 1.7e-06 57.8 49 63.3
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 3.7e-06 56.6 49 61.2
Lsat_1_v5_gn_9_26841 Lactuca sativa HOM05D003467 ORTHO05D004220 8.2e-06 55.5 76 39.5


User provided reference genes

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