Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004462g0010 Nicotiana tabacum HOM05D001026 ORTHO05D013938 3.2e-65 251.5 119 100.0
Nitab4.5_0000017g0130 Nicotiana tabacum HOM05D001026 ORTHO05D003027 6.0e-48 194.1 102 91.2
Peaxi162Scf00937g00013 Petunia axillaris HOM05D001026 ORTHO05D003027 1.3e-42 176.4 102 81.4
CAN.G81.7 Capsicum annuum HOM05D001026 ORTHO05D003027 1.7e-42 176.0 102 80.4
PGSC0003DMG402007274 Solanum tuberosum HOM05D001026 ORTHO05D003027 8.4e-42 173.7 102 79.4
Sopen06g003990 Solanum pennellii HOM05D001026 ORTHO05D003027 5.4e-41 171.0 100 79.0
MBI02_g10704_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D003027 1.5e-35 152.9 100 72.0
TPR.G24224 Trifolium pratense HOM05D001026 ORTHO05D003027 2.6e-35 152.1 101 69.3
Nn5g29991 Nelumbo nucifera HOM05D001026 ORTHO05D003027 7.6e-35 150.6 100 69.0
Eucgr.B00043 Eucalyptus grandis HOM05D001026 ORTHO05D003027 1.0e-34 150.2 100 69.0
Actinidia10346 Actinidia chinensis HOM05D001026 ORTHO05D003027 1.3e-34 149.8 100 71.0
Sc01g0000840 Simmondsia chinensis HOM05D001026 ORTHO05D003027 1.3e-34 149.8 100 68.0
Duzib093G0557 Durio zibethinus HOM05D001026 ORTHO05D003027 2.2e-34 149.1 102 67.6
vmacro21287 Vaccinium macrocarpon HOM05D001026 ORTHO05D003027 2.2e-34 149.1 100 70.0
Dinv44807 Davidia involucrata HOM05D001026 ORTHO05D013938 3.8e-34 148.3 101 68.3
QL02p002313 Quercus lobata HOM05D001026 ORTHO05D003027 6.5e-34 147.5 100 68.0
ECA232G0643 Erigeron canadensis HOM05D001026 ORTHO05D003027 8.4e-34 147.1 100 70.0
GSVIVG01009087001 Vitis vinifera HOM05D001026 ORTHO05D003027 8.4e-34 147.1 100 69.0
Atru.chr13.1115 Acer truncatum HOM05D001026 ORTHO05D003027 1.1e-33 146.7 103 67.0
AUR62018975 Chenopodium quinoa HOM05D001026 ORTHO05D003027 1.4e-33 146.4 100 68.0
CANSAT64G2664 Cannabis sativa HOM05D001026 ORTHO05D003027 1.9e-33 146.0 100 66.0
DCAR_019290 Daucus carota HOM05D001026 ORTHO05D003027 1.9e-33 146.0 100 68.0
Aqoxy6G00080 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 2.5e-33 145.6 100 70.0
AUR62027816 Chenopodium quinoa HOM05D001026 ORTHO05D003027 2.5e-33 145.6 100 68.0
PGR031G3469 Punica granatum HOM05D001026 ORTHO05D003027 2.5e-33 145.6 100 66.0
VMungo1309G1798 Vigna mungo HOM05D001026 ORTHO05D003027 2.5e-33 145.6 100 65.0
Glyma.06G100600 Glycine max HOM05D001026 ORTHO05D003027 3.2e-33 145.2 100 65.0
Oeu029738.1 Olea europaea HOM05D001026 ORTHO05D003027 3.2e-33 145.2 100 67.0
Hma1.2p1_0593F.1_g185790 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 4.2e-33 144.8 102 67.6
Hma1.2p1_1613F.1_g293630 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 4.2e-33 144.8 102 67.6
Prupe.1G523500 Prunus persica HOM05D001026 ORTHO05D003027 5.5e-33 144.4 100 63.0
Manes.18G063352 Manihot esculenta HOM05D001026 ORTHO05D003027 7.1e-33 144.1 99 67.7
Psat5g050480 Pisum sativum HOM05D001026 ORTHO05D003027 7.1e-33 144.1 100 65.0
Sabra02G0079100 Salix brachista HOM05D001026 ORTHO05D003027 7.1e-33 144.1 120 56.7
EL10Ac1g01143 Beta vulgaris HOM05D001026 ORTHO05D003027 9.3e-33 143.7 100 64.0
Medtr3g099500 Medicago truncatula HOM05D001026 ORTHO05D003027 9.3e-33 143.7 100 66.0
Rhsim06G0077600 Rhododendron simsii HOM05D001026 ORTHO05D003027 9.3e-33 143.7 99 67.7
Gohir.A05G223500 Gossypium hirsutum HOM05D001026 ORTHO05D003027 2.1e-32 142.5 100 67.0
Gohir.D05G226200 Gossypium hirsutum HOM05D001026 ORTHO05D003027 2.1e-32 142.5 100 67.0
Gorai.009G233800 Gossypium raimondii HOM05D001026 ORTHO05D003027 2.1e-32 142.5 100 67.0
RcHm_v2.0_Chr7g0238421 Rosa chinensis HOM05D001026 ORTHO05D003027 2.1e-32 142.5 100 64.0
Cc10_g06640 Coffea canephora HOM05D001026 ORTHO05D003027 2.7e-32 142.1 101 63.4
Migut.C00087 Erythranthe guttata HOM05D001026 ORTHO05D003027 2.7e-32 142.1 100 63.0
TAR381G1146 Trochodendron aralioides HOM05D001026 ORTHO05D003027 2.7e-32 142.1 101 68.3
AL6G41470 Arabidopsis lyrata HOM05D001026 ORTHO05D003027 3.5e-32 141.7 101 66.3
AT4G09020 Arabidopsis thaliana HOM05D001026 ORTHO05D003027 3.5e-32 141.7 101 66.3
Lsat_1_v5_gn_9_73901 Lactuca sativa HOM05D001026 ORTHO05D003027 3.5e-32 141.7 100 67.0
Lalb_Chr23g0270251 Lupinus albus HOM05D001026 ORTHO05D003027 3.5e-32 141.7 101 65.3
Potri.002G100900 Populus trichocarpa HOM05D001026 ORTHO05D003027 4.6e-32 141.4 102 64.7
Hund26992 Selenicereus undatus HOM05D001026 ORTHO05D003027 4.6e-32 141.4 98 68.4
Ca_16037_v3 Cicer arietinum L. HOM05D001026 ORTHO05D003027 6.0e-32 141.0 100 64.0
FAN13G2529 Fragaria x ananassa HOM05D001026 ORTHO05D003027 6.0e-32 141.0 100 62.0
Glyma.04G098900 Glycine max HOM05D001026 ORTHO05D003027 6.0e-32 141.0 99 62.6
Ciclev10000347m.g Citrus clementina HOM05D001026 ORTHO05D003027 7.9e-32 140.6 99 65.7
Aa31LG9G14700 Aethionema arabicum HOM05D001026 ORTHO05D003027 1.0e-31 140.2 101 65.3
HanXRQChr09g0248901 Helianthus annuus HOM05D001026 ORTHO05D003027 1.0e-31 140.2 98 65.3
Carub.0006s2761 Capsella rubella HOM05D001026 ORTHO05D003027 1.3e-31 139.8 101 66.3
Lalb_Chr23g0270351 Lupinus albus HOM05D001026 ORTHO05D003027 1.3e-31 139.8 100 65.0
Phvul.009G033200 Phaseolus vulgaris HOM05D001026 ORTHO05D003027 1.8e-31 139.4 100 63.0
unitig_578.g16559 Utricularia gibba HOM05D001026 ORTHO05D003027 1.8e-31 139.4 100 60.0
FAN08G1116 Fragaria x ananassa HOM05D001026 ORTHO05D003027 2.3e-31 139.0 100 61.0
CSS0005078 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D003027 3.0e-31 138.7 100 65.0
CSS0022327 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D003027 3.0e-31 138.7 100 65.0
Cpa.g.sc36.185 Carica papaya HOM05D001026 ORTHO05D003027 3.0e-31 138.7 100 64.0
Thhalv10028452m.g Eutrema salsugineum HOM05D001026 ORTHO05D003027 3.0e-31 138.7 101 65.3
Lj1g0013315 Lotus japonicus HOM05D001026 ORTHO05D003027 3.9e-31 138.3 100 65.0
Thecc.08G101600 Theobroma cacao HOM05D001026 ORTHO05D003027 3.9e-31 138.3 100 64.0
FvH4_5g36440 Fragaria vesca HOM05D001026 ORTHO05D003027 5.1e-31 137.9 100 61.0
FAN18G3833 Fragaria x ananassa HOM05D001026 ORTHO05D003027 5.1e-31 137.9 100 61.0
PSO447G0146 Papaver somniferum HOM05D001026 ORTHO05D003027 5.1e-31 137.9 101 66.3
PSO447G0299 Papaver somniferum HOM05D001026 ORTHO05D003027 5.1e-31 137.9 101 66.3
PSO447G0331 Papaver somniferum HOM05D001026 ORTHO05D003027 5.1e-31 137.9 101 66.3
THA.LOC104816575 Tarenaya hassleriana HOM05D001026 ORTHO05D003027 5.1e-31 137.9 101 65.3
PSO700G0091 Papaver somniferum HOM05D001026 ORTHO05D003027 1.1e-30 136.7 101 64.4
COL.COLO4_12004 Corchorus olitorius HOM05D001026 ORTHO05D003027 1.5e-30 136.3 121 57.0
Haze_18256 Corylus avellana HOM05D001026 ORTHO05D003027 1.5e-30 136.3 100 64.0
SGA_v2.0_scaffold74G24556 Striga asiatica HOM05D001026 ORTHO05D003027 1.5e-30 136.3 100 61.0
CARHR260080 Cardamine hirsuta HOM05D001026 ORTHO05D003027 2.5e-30 135.6 101 62.4
ClCG11G014330 Citrullus lanatus HOM05D001026 ORTHO05D005232 2.5e-30 135.6 101 61.4
CsaV3_3G047730 Cucumis sativus L. HOM05D001026 ORTHO05D003027 2.5e-30 135.6 99 61.6
CiPaw.15G045600 Carya illinoinensis HOM05D001026 ORTHO05D003027 4.3e-30 134.8 100 61.0
Sp6g08550 Schrenkiella parvula HOM05D001026 ORTHO05D003027 7.4e-30 134.0 101 63.4
Cfa017894 Carpinus fangiana HOM05D001026 ORTHO05D005232 1.3e-29 133.3 100 62.0
arahy.Tifrunner.gnm1.ann1.T6QQUE Arachis hypogaea HOM05D001026 ORTHO05D003027 1.6e-29 132.9 100 63.0
BcaB01g02825 Brassica carinata HOM05D001026 ORTHO05D003027 4.8e-29 131.3 100 62.0
BcaC01g04738 Brassica carinata HOM05D001026 ORTHO05D003027 4.8e-29 131.3 100 61.0
C03p34310 Brassica napus HOM05D001026 ORTHO05D003027 4.8e-29 131.3 100 61.0
BolC3t15740H Brassica oleracea HOM05D001026 ORTHO05D003027 4.8e-29 131.3 100 61.0
MD08G1188900 Malus domestica HOM05D001026 ORTHO05D003027 4.8e-29 131.3 98 60.2
arahy.Tifrunner.gnm1.ann1.M8RGP5 Arachis hypogaea HOM05D001026 ORTHO05D003027 6.2e-29 131.0 100 62.0
A03p28380 Brassica napus HOM05D001026 ORTHO05D003027 6.2e-29 131.0 100 62.0
BraA03t12043Z Brassica rapa HOM05D001026 ORTHO05D003027 6.2e-29 131.0 100 62.0
MD15G1376800 Malus domestica HOM05D001026 ORTHO05D003027 6.2e-29 131.0 100 58.0
ATR0684G064 Amborella trichopoda HOM05D001026 ORTHO05D003027 1.4e-28 129.8 102 60.8
TWI56G0632 Tripterygium wilfordii HOM05D001026 ORTHO05D003027 3.1e-28 128.6 100 58.0
AagrBONN_evm.TU.Sc2ySwM_344.2278 Anthoceros agrestis HOM05D001026 ORTHO05D003027 3.4e-27 125.2 100 58.0
HPP92_005984 Vanilla planifolia HOM05D001026 ORTHO05D003027 3.4e-27 125.2 101 59.4
Solyc06g009220.4 Solanum lycopersicum HOM05D001026 ORTHO05D003027 2.2e-26 122.5 62 83.9
Mapoly0118s0006 Marchantia polymorpha HOM05D001026 ORTHO05D003027 5.0e-26 121.3 101 57.4
CDE06G1501 Ceratophyllum demersum HOM05D001026 ORTHO05D003027 6.5e-26 120.9 97 55.7
Zm00001eb315710 Zea mays HOM05D001026 ORTHO05D003027 6.5e-26 120.9 101 55.4
Actinidia37311 Actinidia chinensis HOM05D001026 ORTHO05D013938 7.2e-25 117.5 89 66.3
Lj4C96G16 Lonicera japonica HOM05D001026 ORTHO05D003027 9.3e-25 117.1 78 71.8
MCO08G089 Micromonas commoda HOM05D001026 ORTHO05D003027 6.1e-24 114.4 101 54.5
Cre03.g207713 Chlamydomonas reinhardtii HOM05D001026 ORTHO05D003027 1.3e-23 113.2 99 55.6
C05p62190 Brassica napus HOM05D001026 ORTHO05D013938 2.3e-23 112.5 102 57.8
Sed0020974 Sechium edule HOM05D001026 ORTHO05D003027 2.3e-23 112.5 100 53.0
CBR_g494 Chara braunii HOM05D001026 ORTHO05D003027 3.9e-23 111.7 102 53.9
Pp3c3_14050 Physcomitrium patens HOM05D001026 ORTHO05D003027 3.3e-22 108.6 103 47.6
Ah.05g169650 Amaranthus hybridus HOM05D001026 ORTHO05D003027 7.4e-22 107.5 95 54.7
SMO171G0036 Selaginella moellendorffii HOM05D001026 ORTHO05D003027 9.7e-22 107.1 103 47.6
Haze_18249 Corylus avellana HOM05D001026 ORTHO05D013938 4.8e-21 104.8 83 60.2
SGA_v2.0_scaffold74G24565 Striga asiatica HOM05D001026 ORTHO05D003027 2.2e-18 95.9 60 66.7
PRCOL_00003870 Prasinoderma coloniale HOM05D001026 ORTHO05D003027 6.5e-18 94.4 102 47.1
SEGI_25885 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.0e-15 87.0 60 61.7
BraA08t32531Z Brassica rapa HOM05D001026 ORTHO05D013938 1.4e-12 76.6 92 47.8
AagrBONN_evm.TU.Sc2ySwM_117.482 Anthoceros agrestis HOM05D001026 ORTHO05D007776 2.2e-10 69.3 105 36.2
Mapoly0105s0013 Marchantia polymorpha HOM05D001026 ORTHO05D007776 2.5e-09 65.9 118 35.6
MCO12G264 Micromonas commoda HOM05D001026 ORTHO05D003027 1.4e-07 60.1 124 29.0
BcaC07g37165 Brassica carinata HOM05D001026 ORTHO05D013938 1.8e-07 59.7 78 43.6
BolC8t47354H Brassica oleracea HOM05D001026 ORTHO05D013938 1.8e-07 59.7 78 43.6
C08p05380 Brassica napus HOM05D001026 ORTHO05D013938 2.6e-06 55.8 78 42.3
SalBow7G2792 Salvia bowleyana HOM05D001026 ORTHO05D003027 2.6e-06 55.8 37 67.6
A08p05140 Brassica napus HOM05D001026 ORTHO05D013938 4.4e-06 55.1 78 43.6
Nitab4.5_0006180g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 7.4e-06 54.3 103 33.0
Nitab4.5_0007392g0010 Nicotiana tabacum HOM05D001026 ORTHO05D007776 9.7e-06 53.9 103 33.0


User provided reference genes

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