Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 6.0e-211 737.3 377 100.0
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 9.7e-201 703.4 377 95.5
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 6.1e-195 684.1 377 92.3
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.0e-194 683.3 377 92.0
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 1.5e-193 679.5 377 90.7
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.6e-158 563.1 377 78.8
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 6.8e-138 494.6 378 67.7
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.7e-136 490.0 378 65.9
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.2e-134 483.8 377 65.0
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 2.1e-134 483.0 377 66.3
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.3e-133 480.3 376 65.4
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 5.1e-133 478.4 377 64.5
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 5.1e-133 478.4 377 63.9
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 2.8e-131 472.6 377 64.5
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 4.4e-129 465.3 376 63.0
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.4e-127 460.3 385 62.3
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 2.7e-126 456.1 379 64.1
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 3.5e-126 455.7 377 60.5
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 3.0e-125 452.6 377 61.8
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.2e-123 447.2 377 60.7
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 2.8e-123 446.0 382 60.2
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 3.6e-123 445.7 380 60.8
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 8.1e-123 444.5 377 60.5
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 2.4e-122 443.0 377 61.8
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 6.8e-122 441.4 377 59.9
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 8.9e-122 441.0 377 60.5
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 3.4e-121 439.1 383 61.9
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 9.9e-121 437.6 381 60.4
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 6.4e-120 434.9 377 60.2
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 8.4e-120 434.5 377 62.6
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 2.4e-119 433.0 378 59.8
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.2e-118 430.6 379 60.2
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.1e-118 429.9 379 59.4
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 2.1e-118 429.9 379 59.1
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 5.1e-117 425.2 396 59.3
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 5.6e-116 421.8 377 57.6
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 2.1e-115 419.9 379 60.2
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 2.1e-115 419.9 377 59.2
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 4.8e-115 418.7 379 59.1
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 4.8e-115 418.7 377 58.9
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 4.8e-115 418.7 379 58.0
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 6.2e-115 418.3 377 57.3
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 1.8e-114 416.8 378 59.8
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 5.3e-114 415.2 377 58.6
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 4.4e-113 412.1 378 58.5
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 8.4e-112 407.9 378 56.9
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 3.2e-111 406.0 380 57.6
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 7.1e-111 404.8 377 59.2
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.6e-110 403.7 384 58.9
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 4.6e-110 402.1 377 58.1
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 7.9e-110 401.4 377 57.0
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 7.9e-110 401.4 377 58.1
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.0e-109 401.0 375 57.3
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 1.7e-109 400.2 376 56.6
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 5.1e-109 398.7 377 55.7
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 5.1e-109 398.7 378 56.6
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 8.7e-109 397.9 378 58.7
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 8.7e-109 397.9 382 55.2
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 4.3e-108 395.6 376 56.1
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 7.4e-108 394.8 379 57.0
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 2.4e-106 389.8 333 58.3
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 2.2e-104 383.3 382 54.5
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 2.9e-104 382.9 381 55.1
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 4.9e-104 382.1 381 55.1
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 1.4e-103 380.6 382 54.7
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 1.6e-102 377.1 381 55.1
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 1.6e-102 377.1 381 54.6
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.1e-102 376.7 377 54.9
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 3.9e-101 372.5 381 53.8
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 5.1e-101 372.1 377 53.8
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 4.8e-99 365.5 381 52.5
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 4.8e-99 365.5 381 52.5
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.4e-98 364.0 399 52.1
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 3.1e-98 362.8 381 52.2
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 9.0e-98 361.3 381 52.2
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 9.0e-98 361.3 382 52.4
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 2.6e-97 359.8 382 51.6
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 5.8e-97 358.6 390 49.7
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.3e-96 357.5 389 52.2
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 2.2e-96 356.7 377 54.6
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 4.9e-96 355.5 380 51.8
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 6.5e-96 355.1 389 51.7
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 8.4e-96 354.8 324 56.8
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 1.1e-95 354.4 385 51.7
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.4e-95 354.0 377 51.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 1.4e-95 354.0 385 51.4
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 6.0e-94 348.6 377 54.1
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 2.3e-93 346.7 405 49.4
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 2.9e-88 329.7 387 45.7
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 5.0e-88 328.9 388 47.7
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 8.7e-85 318.2 381 48.8
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.2e-80 303.5 168 94.0
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 2.6e-76 290.0 283 55.8
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 2.6e-73 280.0 317 52.4
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 1.1e-71 274.6 257 55.3
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.6e-70 270.8 257 52.9
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 5.2e-69 265.8 199 63.8
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 9.7e-68 261.5 390 41.0
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 2.6e-65 253.4 389 39.3
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 5.9e-65 252.3 225 62.7
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.1e-55 221.5 169 69.8
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 2.1e-54 217.2 381 39.1
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 8.8e-53 211.8 170 63.5
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 3.7e-51 206.5 380 38.4
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 4.8e-51 206.1 233 48.1
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 3.0e-45 186.8 378 36.0
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 1.5e-44 184.5 178 53.9
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.1e-42 178.3 166 53.0
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 1.0e-37 161.8 279 36.2
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.0e-29 135.2 161 47.8
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 2.3e-29 134.0 160 48.8
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.3e-29 134.0 189 40.7
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 6.8e-29 132.5 82 79.3
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.6e-28 130.6 189 40.2
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 7.5e-28 129.0 159 43.4
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 2.0e-25 120.9 168 44.6
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.0e-24 118.6 142 50.7
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 5.6e-23 112.8 167 36.5
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.5e-15 87.4 104 41.3
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.1e-14 84.3 92 44.6
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 6.8e-13 79.3 70 52.9
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 6.4e-11 72.8 81 46.9
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 3.5e-09 67.0 438 23.1


User provided reference genes

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