Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 0.0e+00 1275.8 627 100.0
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 0.0e+00 1135.2 634 89.6
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 0.0e+00 1103.2 626 87.4
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 0.0e+00 1101.7 626 87.1
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 6.1e-309 1063.5 627 84.1
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.7e-306 1055.4 625 83.5
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 1.5e-302 1042.3 632 82.3
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 3.3e-302 1041.2 635 81.6
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 2.3e-300 1035.0 612 83.2
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 3.0e-300 1034.6 625 82.2
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 2.6e-299 1031.6 576 86.1
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 3.7e-298 1027.7 576 86.5
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 2.9e-295 1018.1 658 77.2
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 8.9e-292 1006.5 621 78.7
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 2.6e-291 1005.0 646 75.7
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 3.4e-291 1004.6 659 75.0
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 5.8e-291 1003.8 651 76.5
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 7.5e-291 1003.4 578 82.2
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 9.8e-291 1003.0 651 76.3
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 1.7e-290 1002.3 656 75.6
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 2.9e-290 1001.5 657 75.6
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 4.9e-290 1000.7 587 81.8
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 1.9e-289 998.8 573 81.8
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 2.4e-289 998.4 587 81.6
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 9.2e-289 996.5 610 78.7
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 2.7e-288 995.0 646 74.6
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 7.8e-288 993.4 647 75.4
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 7.8e-288 993.4 580 80.7
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 1.7e-287 992.3 643 75.1
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 3.3e-286 988.0 569 82.1
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 3.3e-286 988.0 577 80.1
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 7.3e-286 986.9 672 73.1
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 9.5e-286 986.5 604 78.0
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.2e-285 986.1 578 80.4
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 1.2e-285 986.1 577 80.6
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.1e-285 985.3 645 74.9
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 2.1e-285 985.3 640 75.6
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 2.8e-285 984.9 660 74.1
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 3.6e-285 984.6 630 77.3
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 4.7e-285 984.2 585 80.2
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 1.1e-284 983.0 641 75.2
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 1.4e-284 982.6 577 80.6
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 1.4e-284 982.6 654 73.9
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 3.1e-284 981.5 582 78.5
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 4.0e-284 981.1 649 74.3
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 5.2e-284 980.7 584 80.5
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 1.2e-283 979.5 647 73.9
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 2.0e-283 978.8 579 80.1
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 3.4e-283 978.0 648 73.9
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 2.9e-282 974.9 576 80.6
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 2.9e-282 974.9 626 75.2
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 4.9e-282 974.2 581 79.3
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 6.4e-282 973.8 586 79.4
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 1.9e-281 972.2 611 77.4
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 4.1e-281 971.1 703 69.1
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 5.4e-281 970.7 654 73.2
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 2.7e-280 968.4 639 74.3
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 3.5e-280 968.0 577 79.7
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 3.5e-280 968.0 590 77.8
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 3.5e-280 968.0 622 74.8
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 6.0e-280 967.2 586 77.6
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 1.3e-279 966.1 626 74.9
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.7e-279 965.7 631 73.7
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 6.6e-279 963.8 579 79.3
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 8.6e-279 963.4 564 80.5
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 8.6e-279 963.4 563 81.7
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 1.5e-278 962.6 607 74.8
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 2.5e-278 961.8 578 78.4
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 1.2e-277 959.5 577 79.0
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 1.2e-277 959.5 576 78.8
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 1.6e-277 959.1 577 78.3
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 8.1e-277 956.8 616 73.9
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 1.4e-276 956.1 580 77.9
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 3.1e-276 954.9 621 73.8
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 6.8e-276 953.7 605 73.7
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.8e-276 953.7 580 77.9
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 8.9e-276 953.4 582 77.3
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.2e-275 953.0 570 79.3
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 2.0e-275 952.2 574 77.7
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 2.6e-275 951.8 618 74.1
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 4.4e-275 951.0 594 76.6
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 1.3e-274 949.5 623 73.5
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 1.7e-274 949.1 618 74.1
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 2.2e-274 948.7 552 79.9
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 3.7e-274 948.0 619 72.7
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 4.9e-274 947.6 632 73.6
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 8.3e-274 946.8 580 77.2
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 1.1e-273 946.4 575 77.4
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 1.1e-273 946.4 581 78.7
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 1.9e-273 945.7 571 76.5
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 2.4e-273 945.3 575 77.2
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 4.1e-273 944.5 577 76.3
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 5.4e-273 944.1 632 73.3
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 9.2e-273 943.3 554 79.8
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 1.2e-272 943.0 549 80.1
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 1.0e-271 939.9 577 75.7
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 1.0e-271 939.9 531 82.9
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 5.1e-271 937.6 528 83.9
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 4.3e-270 934.5 543 80.3
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 2.8e-269 931.8 743 65.1
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 1.1e-268 929.9 568 76.6
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 1.1e-268 929.9 617 74.6
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 1.2e-264 916.4 607 72.5
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 4.3e-262 907.9 609 72.2
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 5.6e-262 907.5 609 72.2
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 9.6e-262 906.7 612 72.2
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 2.1e-256 889.0 545 76.5
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 3.9e-255 884.8 566 75.1
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 2.8e-253 878.6 532 77.3
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 9.0e-252 873.6 573 74.3
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 8.4e-250 867.1 548 74.5
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 1.9e-249 865.9 610 68.9
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 6.0e-248 860.9 642 68.8
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 1.3e-242 843.2 542 76.2
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 1.9e-241 839.3 601 70.5
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 8.7e-231 803.9 448 84.6
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 2.5e-230 802.4 583 65.4
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 5.7e-230 801.2 448 84.4
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 6.3e-229 797.7 537 72.8
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 3.6e-224 781.9 576 64.8
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 3.0e-223 778.9 439 82.7
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 1.3e-221 773.5 549 66.7
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 6.7e-207 724.5 517 68.1
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.7e-195 686.0 483 69.8
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 6.8e-191 671.4 452 71.2
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 1.4e-183 647.1 538 58.4
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 1.4e-172 610.5 361 78.7
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 7.1e-164 581.6 344 79.1
Nn7g36025 Nelumbo nucifera HOM05D004119 ORTHO05D004797 5.4e-156 555.4 570 54.0
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 1.7e-149 533.9 384 70.3
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 5.6e-145 518.8 560 48.8
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 1.4e-143 514.2 417 64.3
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 1.9e-140 503.8 541 52.3
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 7.9e-139 498.4 280 82.1
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 2.8e-136 490.0 278 82.4
arahy.Tifrunner.gnm1.ann1.J6MIXF Arachis hypogaea HOM05D004119 ORTHO05D004797 5.5e-132 475.7 331 71.9
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.2e-117 427.2 574 43.9
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 8.5e-109 398.7 288 65.3
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 3.1e-95 353.6 643 35.9
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 8.2e-88 328.9 262 64.9
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 2.7e-86 323.9 184 78.8
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 8.8e-82 308.9 188 73.9
RcHm_v2.0_Chr5g0079011 Rosa chinensis HOM05D004119 ORTHO05D004797 4.8e-80 303.1 179 78.8
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 5.4e-79 299.7 592 35.3
TAR369G0071 Trochodendron aralioides HOM05D004119 ORTHO05D004797 2.0e-78 297.7 179 78.2
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 5.9e-78 296.2 589 34.8
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 9.4e-76 288.9 167 80.2
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 4.0e-66 256.9 609 32.0
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 1.5e-65 255.0 388 39.7
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 1.3e-64 251.9 321 45.2
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.1e-63 248.8 140 80.7
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.5e-60 237.7 595 30.9
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 7.3e-60 236.1 183 62.3
TAR362G0095 Trochodendron aralioides HOM05D004119 ORTHO05D004797 4.4e-49 200.3 117 78.6
MD11G1020000 Malus domestica HOM05D004119 ORTHO05D004797 2.2e-48 198.0 120 82.5
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 8.1e-43 179.5 100 86.0
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 4.0e-42 177.2 107 74.8
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 2.9e-40 171.0 155 56.8
TAR362G1239 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.2e-38 165.6 122 66.4
TAR369G0705 Trochodendron aralioides HOM05D004119 ORTHO05D004797 9.3e-31 139.4 114 62.3
TPR.G14880 Trifolium pratense HOM05D004119 ORTHO05D004797 1.7e-29 135.2 77 79.2
Lj1A436G11 Lonicera japonica HOM05D004119 ORTHO05D004797 6.6e-29 133.3 90 66.7
Lsat_1_v5_gn_4_11801 Lactuca sativa HOM05D004119 ORTHO05D004797 1.6e-27 128.6 137 50.4
Hund21661 Selenicereus undatus HOM05D002401 ORTHO05D007109 2.1e-27 128.3 67 85.1
MBI04_g37845_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 4.8e-27 127.1 65 90.8
RcHm_v2.0_Chr5g0079031 Rosa chinensis HOM05D004119 ORTHO05D004797 7.4e-20 103.2 64 76.6
TPR.G25082 Trifolium pratense HOM05D004119 ORTHO05D004797 8.1e-11 73.2 120 40.8
RcHm_v2.0_Chr5g0079041 Rosa chinensis HOM05D004119 ORTHO05D004797 9.0e-10 69.7 59 57.6
TAR633G0263 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.5e-09 68.9 54 63.0
Actinidia39373 Actinidia chinensis HOM05D004119 ORTHO05D004797 7.6e-09 66.6 54 63.0
HanXRQChr13g0426091 Helianthus annuus HOM05D004119 ORTHO05D004797 1.3e-08 65.9 38 73.7
BraA01t00507Z Brassica rapa HOM05D004119 ORTHO05D004797 1.9e-07 62.0 58 48.3


User provided reference genes

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