Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004377g0030 Nicotiana tabacum HOM05D003562 ORTHO05D004074 5.3e-104 380.9 182 100.0
Nitab4.5_0004377g0020 Nicotiana tabacum HOM05D003562 ORTHO05D004074 1.2e-66 256.9 158 75.3
Peaxi162Scf00025g02824 Petunia axillaris HOM05D003562 ORTHO05D004074 7.0e-64 247.7 153 73.9
Nitab4.5_0002396g0040 Nicotiana tabacum HOM05D003562 ORTHO05D004074 4.3e-61 238.4 150 72.7
PGSC0003DMG400006063 Solanum tuberosum HOM05D003562 ORTHO05D004074 2.1e-60 236.1 168 69.0
Peaxi162Scf00125g00231 Petunia axillaris HOM05D003562 ORTHO05D004074 9.8e-58 227.3 156 68.6
PGSC0003DMG400006032 Solanum tuberosum HOM05D003562 ORTHO05D004074 2.2e-57 226.1 157 67.5
CAN.G557.9 Capsicum annuum HOM05D003562 ORTHO05D004074 3.7e-57 225.3 167 64.1
PGSC0003DMG400042505 Solanum tuberosum HOM05D003562 ORTHO05D004074 1.4e-56 223.4 161 65.2
PGSC0003DMG400039163 Solanum tuberosum HOM05D003562 ORTHO05D004074 2.4e-56 222.6 160 66.9
PGSC0003DMG400006062 Solanum tuberosum HOM05D003562 ORTHO05D004074 1.2e-55 220.3 161 64.0
Solyc11g005230.1 Solanum lycopersicum HOM05D003562 ORTHO05D004074 2.3e-54 216.1 158 65.2
Sopen11g001240 Solanum pennellii HOM05D003562 ORTHO05D004074 2.3e-54 216.1 158 65.2
Sopen11g001250 Solanum pennellii HOM05D003562 ORTHO05D004074 3.3e-53 212.2 157 66.2
Nitab4.5_0002396g0050 Nicotiana tabacum HOM05D003562 ORTHO05D004074 5.6e-53 211.5 116 89.7
Solyc11g005240.1 Solanum lycopersicum HOM05D003562 ORTHO05D004074 1.2e-52 210.3 157 65.0
CAN.G557.10 Capsicum annuum HOM05D003562 ORTHO05D004074 3.1e-51 205.7 164 64.6
Nitab4.5_0002396g0020 Nicotiana tabacum HOM05D003562 ORTHO05D004074 5.4e-48 194.9 166 61.4
CAN.G341.6 Capsicum annuum HOM05D003562 ORTHO05D002248 8.6e-38 161.0 158 55.1
Sopen11g001180 Solanum pennellii HOM05D003562 ORTHO05D004074 3.0e-30 136.0 154 47.4
Solyc11g005180.1 Solanum lycopersicum HOM05D003562 ORTHO05D004074 2.5e-29 132.9 154 46.8
Solyc06g005930.3 Solanum lycopersicum HOM05D003562 ORTHO05D004074 2.8e-28 129.4 160 43.8
MBI18_g45417_MAGBIO Magnolia biondii HOM05D003562 ORTHO05D004074 3.3e-21 105.9 158 35.4
vmacro18374 Vaccinium macrocarpon HOM05D000884 ORTHO05D002127 3.6e-20 102.4 145 40.0
Rhsim08G0039700 Rhododendron simsii HOM05D000884 ORTHO05D002127 1.4e-19 100.5 145 40.0
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 1.8e-19 100.1 142 39.4
PGSC0003DMG400016924 Solanum tuberosum HOM05D003562 ORTHO05D051166 4.5e-18 95.5 74 62.2
QL06p011807 Quercus lobata HOM05D003562 ORTHO05D004074 2.4e-16 89.7 141 36.9
Solyc03g071623.1 Solanum lycopersicum HOM05D003562 ORTHO05D051166 1.5e-13 80.5 66 60.6
Dinv02658 Davidia involucrata HOM05D003562 ORTHO05D004074 1.2e-10 70.9 83 44.6
PGSC0003DMG400006031 Solanum tuberosum HOM05D003562 ORTHO05D395926 3.8e-09 65.9 76 44.7
Dinv33286 Davidia involucrata HOM05D003562 ORTHO05D004074 8.4e-09 64.7 124 33.9
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-07 60.1 124 28.2
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 1.3e-06 57.4 127 31.5
MBI18_g19830_MAGBIO Magnolia biondii HOM05D003562 ORTHO05D004074 1.8e-06 57.0 67 38.8
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 8.7e-06 54.7 127 30.7
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 8.7e-06 54.7 127 30.7


User provided reference genes

Program Settings