Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004376g0180 Nicotiana tabacum HOM05D000540 ORTHO05D008899 3.4e-29 131.0 64 100.0
AL1G45030 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 9.5e-24 112.8 78 75.6
BolSC56t61242H Brassica oleracea HOM05D000540 ORTHO05D008899 1.5e-21 105.5 77 71.4
CsaV3_2G008470 Cucumis sativus L. HOM05D006248 ORTHO05D007896 5.7e-21 103.6 64 82.8
Nn020s41485 Nelumbo nucifera HOM05D000540 ORTHO05D008899 5.7e-21 103.6 61 83.6
Nn5g27213 Nelumbo nucifera HOM05D000540 ORTHO05D008899 5.7e-21 103.6 61 83.6
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.7e-21 103.6 61 82.0
Peaxi162Scf00483g00319 Petunia axillaris HOM05D000540 ORTHO05D008899 5.7e-21 103.6 59 86.4
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 9.8e-21 102.8 64 81.2
CAN.G1109.8 Capsicum annuum HOM05D000540 ORTHO05D008899 1.3e-20 102.4 59 84.7
CAN.G114.6 Capsicum annuum HOM05D000540 ORTHO05D008899 1.3e-20 102.4 59 84.7
CAN.G781.25 Capsicum annuum HOM05D000540 ORTHO05D008899 1.3e-20 102.4 59 84.7
Nn021s41514 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.3e-20 102.4 66 81.8
Nn145s44091 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.3e-20 102.4 66 81.8
Nn3g16152 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.3e-20 102.4 66 81.8
MELO3C028092.2 Cucumis melo HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Gohir.A04G039075 Gossypium hirsutum HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Gohir.A12G089000 Gossypium hirsutum HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Gohir.D01G102216 Gossypium hirsutum HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
LjContig00489g0018536 Lotus japonicus HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Sed0004093 Sechium edule HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Sed0007321 Sechium edule HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Sed0008426 Sechium edule HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Sed0015411 Sechium edule HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Sed0019752 Sechium edule HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Sed0026411 Sechium edule HOM05D000540 ORTHO05D008899 1.7e-20 102.1 59 84.7
Nn1g08201 Nelumbo nucifera HOM05D000540 ORTHO05D008899 2.9e-20 101.3 61 82.0
SalBow1G0808 Salvia bowleyana HOM05D000540 ORTHO05D008899 2.9e-20 101.3 59 83.1
SalBow1G3106 Salvia bowleyana HOM05D000540 ORTHO05D008899 2.9e-20 101.3 59 83.1
Gohir.A10G084500 Gossypium hirsutum HOM05D000540 ORTHO05D008899 3.7e-20 100.9 59 83.1
Peaxi162Scf00211g00237 Petunia axillaris HOM05D000540 ORTHO05D008899 4.9e-20 100.5 59 84.7
RcHm_v2.0_CPg0502591 Rosa chinensis HOM05D000540 ORTHO05D008899 6.4e-20 100.1 59 83.1
Gohir.1Z050392 Gossypium hirsutum HOM05D000540 ORTHO05D008899 8.3e-20 99.8 59 83.1
HanXRQChr00c0165g0572201 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr00c0349g0573971 Helianthus annuus HOM05D000540 ORTHO05D000681 1.1e-19 99.4 59 83.1
HanXRQChr00c0368g0574201 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr00c0496g0575201 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr00c0572g0575951 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr00c0585g0576271 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr05g0152521 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr09g0256691 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr10g0284441 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr10g0318001 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr11g0321161 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr11g0352351 Helianthus annuus HOM05D000540 ORTHO05D000681 1.1e-19 99.4 59 83.1
HanXRQChr13g0416611 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
HanXRQChr15g0488331 Helianthus annuus HOM05D000540 ORTHO05D008899 1.1e-19 99.4 59 83.1
CsaV3_UNG209010 Cucumis sativus L. HOM05D000540 ORTHO05D008899 1.4e-19 99.0 59 83.1
DCAR_032528 Daucus carota HOM05D000540 ORTHO05D008899 1.4e-19 99.0 59 83.1
DCAR_032548 Daucus carota HOM05D000540 ORTHO05D008899 1.4e-19 99.0 59 83.1
Migut.D01325 Erythranthe guttata HOM05D000540 ORTHO05D000681 1.4e-19 99.0 59 81.4
Potri.005G154350 Populus trichocarpa HOM05D000540 ORTHO05D008899 1.4e-19 99.0 59 83.1
Potri.013G138612 Populus trichocarpa HOM05D000540 ORTHO05D008899 1.4e-19 99.0 59 83.1
GSVIVG01023980001 Vitis vinifera HOM05D000540 ORTHO05D008899 1.4e-19 99.0 59 83.1
RcHm_v2.0_Chr2g0118491 Rosa chinensis HOM05D000540 ORTHO05D008899 1.8e-19 98.6 59 83.1
Lsat_1_v5_gn_5_27661 Lactuca sativa HOM05D000540 ORTHO05D008899 2.4e-19 98.2 51 92.2
Lsat_1_v5_gn_7_82661 Lactuca sativa HOM05D000540 ORTHO05D008899 2.4e-19 98.2 51 92.2
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.4e-19 98.2 64 79.7
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 2.4e-19 98.2 59 83.1
PGR111G0050 Punica granatum HOM05D000540 ORTHO05D008899 2.4e-19 98.2 59 81.4
PGR111G0124 Punica granatum HOM05D000540 ORTHO05D008899 2.4e-19 98.2 59 81.4
AL2G20490 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
AL2G21780 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
AL4G23550 Arabidopsis lyrata HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
ATCG00840 Arabidopsis thaliana HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
ATCG01300 Arabidopsis thaliana HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
BolC2t10582H Brassica oleracea HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
CARHR282300 Cardamine hirsuta HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
CARHR282570 Cardamine hirsuta HOM05D000540 ORTHO05D008899 3.2e-19 97.8 59 81.4
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 4.1e-19 97.4 59 79.7
Gohir.D06G104900 Gossypium hirsutum HOM05D000540 ORTHO05D008899 5.4e-19 97.1 59 79.7
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 5.4e-19 97.1 58 81.0
PSO548G0098 Papaver somniferum HOM05D000540 ORTHO05D008899 7.0e-19 96.7 61 80.3
PSO548G0119 Papaver somniferum HOM05D000540 ORTHO05D008899 7.0e-19 96.7 61 80.3
CSS0035327 Camellia sinensis var. sinensis HOM05D000540 ORTHO05D008899 1.6e-18 95.5 54 87.0
Lalb_Chr07g0191961 Lupinus albus HOM05D000540 ORTHO05D008899 1.6e-18 95.5 59 81.4
Gorai.007G229500 Gossypium raimondii HOM05D000540 ORTHO05D008899 2.0e-18 95.1 59 79.7
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 2.0e-18 95.1 51 90.2
ClCG00G001570 Citrullus lanatus HOM05D000540 ORTHO05D008899 7.8e-18 93.2 57 78.9
Medtr0002s0350 Medicago truncatula HOM05D000540 ORTHO05D008899 1.0e-17 92.8 59 74.6
Nn4g25233 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.3e-17 92.4 61 77.0
Nitab4.5_0020349g0050 Nicotiana tabacum HOM05D000540 ORTHO05D008899 1.3e-17 92.4 59 81.4
GSVIVG01023244001 Vitis vinifera HOM05D000540 ORTHO05D008899 2.3e-17 91.7 77 61.0
CAN.G895.34 Capsicum annuum HOM05D000540 ORTHO05D008899 3.0e-17 91.3 59 78.0
HanXRQChr13g0413481 Helianthus annuus HOM05D000540 ORTHO05D008899 3.0e-17 91.3 54 81.5
Lj4g0015929 Lotus japonicus HOM05D000540 ORTHO05D008899 3.9e-17 90.9 59 76.3
LjContig00318g0005310 Lotus japonicus HOM05D000540 ORTHO05D008899 3.9e-17 90.9 59 76.3
LjContig00318g0024355 Lotus japonicus HOM05D000540 ORTHO05D008899 3.9e-17 90.9 59 76.3
LjContig00319g0005990 Lotus japonicus HOM05D000540 ORTHO05D008899 3.9e-17 90.9 59 76.3
LjContig00319g0017169 Lotus japonicus HOM05D000540 ORTHO05D008899 3.9e-17 90.9 59 76.3
Gohir.D04G085766 Gossypium hirsutum HOM05D000540 ORTHO05D008899 8.6e-17 89.7 59 72.9
Gohir.D11G213500 Gossypium hirsutum HOM05D000540 ORTHO05D008899 1.9e-16 88.6 59 74.6
CAN.G1468.2 Capsicum annuum HOM05D000540 ORTHO05D008899 3.3e-16 87.8 64 70.3
HanXRQChr00c0451g0574831 Helianthus annuus HOM05D000540 ORTHO05D008899 3.3e-16 87.8 52 80.8
Gohir.D06G105280 Gossypium hirsutum HOM05D000540 ORTHO05D008899 4.3e-16 87.4 59 74.6
Medtr4g051430 Medicago truncatula HOM05D000540 ORTHO05D000681 5.6e-16 87.0 59 74.6
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 5.6e-16 87.0 56 75.0
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 7.3e-16 86.7 46 89.1
ClCG10G020130 Citrullus lanatus HOM05D000540 ORTHO05D008899 2.1e-15 85.1 61 72.1
Lalb_Chr25g0281971 Lupinus albus HOM05D000540 ORTHO05D008899 2.1e-15 85.1 59 72.9
Medtr4g047920 Medicago truncatula HOM05D000540 ORTHO05D000681 2.1e-15 85.1 59 72.9
CAN.G895.33 Capsicum annuum HOM05D000540 ORTHO05D008899 4.7e-15 84.0 59 74.6
CSS0033691 Camellia sinensis var. sinensis HOM05D000540 ORTHO05D008899 5.2e-14 80.5 48 79.2
Nitab4.5_0014666g0090 Nicotiana tabacum HOM05D000540 ORTHO05D008899 5.2e-14 80.5 59 71.2
Peaxi162Scf00525g00033 Petunia axillaris HOM05D000540 ORTHO05D008899 8.9e-14 79.7 51 80.4
Migut.D01406 Erythranthe guttata HOM05D000540 ORTHO05D000681 4.4e-13 77.4 48 72.9
Lsat_1_v5_gn_3_85660 Lactuca sativa HOM05D000445 ORTHO05D008899 1.3e-12 75.9 47 78.7
GSVIVG01010311001 Vitis vinifera HOM05D000540 ORTHO05D008899 8.3e-12 73.2 43 81.4
Nn4g25231 Nelumbo nucifera HOM05D000540 ORTHO05D008899 1.4e-11 72.4 37 89.2
Sed0012077 Sechium edule HOM05D000540 ORTHO05D008899 1.4e-11 72.4 59 66.1
HanXRQChr03g0073071 Helianthus annuus HOM05D000540 ORTHO05D008899 3.2e-11 71.2 43 79.1
Potri.011G074401 Populus trichocarpa HOM05D000540 ORTHO05D000681 3.2e-11 71.2 46 76.1
Ciclev10010272m.g Citrus clementina HOM05D000540 ORTHO05D008899 1.0e-09 66.2 41 80.5
Oeu062848.1 Olea europaea HOM05D000540 ORTHO05D008899 5.0e-09 63.9 35 88.6
arahy.Tifrunner.gnm1.ann1.LF45NH Arachis hypogaea HOM05D000540 ORTHO05D000681 6.6e-09 63.5 65 56.9
ClCG00G001500 Citrullus lanatus HOM05D000540 ORTHO05D008899 6.6e-09 63.5 35 88.6
HanXRQChr00c0126g0571811 Helianthus annuus HOM05D000540 ORTHO05D000681 3.3e-08 61.2 35 82.9
vmacro07326 Vaccinium macrocarpon HOM05D003842 ORTHO05D004436 1.2e-07 59.3 40 72.5
Medtr2g098600 Medicago truncatula HOM05D000540 ORTHO05D008899 2.1e-07 58.5 43 67.4
Nn1g04854 Nelumbo nucifera HOM05D000540 ORTHO05D008899 2.1e-07 58.5 40 75.0
Gohir.D11G067360 Gossypium hirsutum HOM05D000540 ORTHO05D000681 3.6e-07 57.8 30 90.0
Sed0017282 Sechium edule HOM05D000540 ORTHO05D000681 3.6e-07 57.8 30 90.0
Sed0006593 Sechium edule HOM05D000540 ORTHO05D000681 1.8e-06 55.5 30 86.7


User provided reference genes

Program Settings