Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004178g0060 Nicotiana tabacum HOM05D004333 ORTHO05D005363 1.7e-191 672.5 343 100.0
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 9.9e-128 460.7 374 70.6
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 6.4e-127 458.0 374 70.3
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 8.2e-114 414.5 372 63.2
CAN.G481.60 Capsicum annuum HOM05D004333 ORTHO05D005363 6.9e-113 411.4 365 64.1
Solyc03g082680.4 Solanum lycopersicum HOM05D004333 ORTHO05D005363 1.5e-112 410.2 372 63.2
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 6.5e-103 378.3 373 59.8
CAN.G481.57 Capsicum annuum HOM05D004333 ORTHO05D005363 3.2e-94 349.4 345 59.7
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 7.5e-67 258.5 390 42.3
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 9.1e-65 251.5 346 43.4
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 2.5e-62 243.4 389 40.1
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 1.2e-61 241.1 379 40.9
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 1.2e-61 241.1 358 41.1
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 1.6e-61 240.7 351 41.9
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 1.8e-60 237.3 364 40.7
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 2.3e-60 236.9 339 42.2
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 4.0e-60 236.1 380 41.1
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 8.9e-60 235.0 381 40.4
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 7.5e-59 231.9 382 40.8
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 1.3e-58 231.1 368 39.4
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 1.3e-58 231.1 378 39.4
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 1.7e-58 230.7 348 41.1
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 4.9e-58 229.2 368 39.9
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 8.3e-58 228.4 391 38.9
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 1.8e-57 227.3 360 40.3
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 2.4e-57 226.9 370 39.2
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 3.2e-57 226.5 381 38.1
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 4.1e-57 226.1 391 38.9
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 2.0e-56 223.8 385 37.7
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 3.5e-56 223.0 378 38.9
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 4.5e-56 222.6 378 38.6
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 4.5e-56 222.6 359 39.8
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 7.8e-56 221.9 379 39.6
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 7.8e-56 221.9 379 39.8
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 1.0e-55 221.5 380 38.9
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 1.3e-55 221.1 382 38.5
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 1.7e-55 220.7 341 40.5
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 2.3e-55 220.3 381 38.3
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 2.9e-55 219.9 380 38.7
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 5.0e-55 219.2 372 39.2
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 8.6e-55 218.4 334 39.8
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 1.5e-54 217.6 378 38.4
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 1.9e-54 217.2 367 39.0
Cpa.g.c29767.1 Carica papaya HOM05D004333 ORTHO05D005363 2.5e-54 216.9 349 39.3
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 3.3e-54 216.5 349 41.3
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 3.3e-54 216.5 337 40.1
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 3.3e-54 216.5 382 37.2
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.3e-54 216.1 367 39.0
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 4.3e-54 216.1 349 41.3
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 5.6e-54 215.7 367 38.7
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 9.5e-54 214.9 335 41.8
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.6e-53 214.2 375 37.6
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 2.8e-53 213.4 389 37.8
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.0e-52 211.5 367 38.4
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 5.2e-52 209.1 367 37.9
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 8.9e-52 208.4 334 40.1
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 1.5e-51 207.6 340 38.8
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 3.4e-51 206.5 381 37.8
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 9.8e-51 204.9 352 35.8
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.7e-50 204.1 345 37.7
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.2e-50 203.8 345 38.0
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 2.2e-50 203.8 338 38.8
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 1.4e-49 201.1 361 37.1
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 2.4e-49 200.3 341 39.0
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 5.4e-49 199.1 347 37.8
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 6.0e-48 195.7 380 33.7
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.3e-47 194.5 345 37.1
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.7e-47 194.1 363 35.8
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 3.9e-47 193.0 368 37.5
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 5.0e-47 192.6 361 38.2
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 1.1e-46 191.4 347 35.4
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 5.6e-46 189.1 360 37.5
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 5.6e-46 189.1 254 41.7
Eucgr.D00251 Eucalyptus grandis HOM05D004333 ORTHO05D005363 1.2e-45 188.0 341 34.6
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 1.2e-45 188.0 321 37.7
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.6e-45 187.6 354 35.3
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 2.1e-45 187.2 361 37.4
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 1.4e-44 184.5 373 35.9
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 1.2e-43 181.4 382 31.9
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 1.5e-43 181.0 364 34.6
Actinidia34249 Actinidia chinensis HOM05D004333 ORTHO05D005363 4.4e-43 179.5 276 39.9
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 2.2e-42 177.2 359 34.8
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 2.2e-42 177.2 361 37.1
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 3.7e-42 176.4 344 36.0
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 8.3e-42 175.3 337 37.7
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 1.2e-40 171.4 344 36.0
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 2.1e-40 170.6 337 36.8
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 2.1e-40 170.6 344 35.8
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 7.8e-40 168.7 348 35.3
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 3.9e-39 166.4 334 33.5
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 1.9e-38 164.1 337 36.2
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 1.9e-38 164.1 337 36.2
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.9e-38 164.1 352 32.7
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 3.3e-38 163.3 333 35.1
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.5e-35 154.5 380 32.4
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 7.6e-35 152.1 335 32.8
SHI08278 Sapria himalayana HOM05D004333 ORTHO05D005363 6.6e-31 139.0 306 32.7
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 1.5e-30 137.9 328 31.4
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.3e-30 136.3 324 30.6
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 9.6e-30 135.2 324 30.2
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 6.2e-29 132.5 236 34.7
Os12g0233600 Oryza sativa ssp. japonica HOM05D004333 ORTHO05D005363 1.5e-27 127.9 331 28.4
BcaNung02039 Brassica carinata HOM05D004333 ORTHO05D005363 4.3e-14 83.2 260 29.2
SEGI_24760 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 5.6e-14 82.8 264 27.7
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 6.2e-13 79.3 324 27.5
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 1.4e-12 78.2 181 31.5
Psat1g100720 Pisum sativum HOM05D004333 ORTHO05D005363 5.3e-12 76.3 132 39.4
Oeu001937.1 Olea europaea HOM05D004333 ORTHO05D005363 1.9e-09 67.8 152 33.6
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 1.2e-08 65.1 191 27.2


User provided reference genes

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