Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004178g0050 Nicotiana tabacum HOM05D004333 ORTHO05D005363 2.8e-174 615.1 308 100.0
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 4.2e-77 292.4 264 64.8
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 4.6e-76 288.9 264 64.4
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 2.0e-71 273.5 262 61.8
Solyc03g082680.4 Solanum lycopersicum HOM05D004333 ORTHO05D005363 5.9e-71 271.9 264 60.2
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 5.9e-71 271.9 264 60.2
CAN.G481.57 Capsicum annuum HOM05D004333 ORTHO05D005363 3.8e-70 269.2 264 61.4
CAN.G481.60 Capsicum annuum HOM05D004333 ORTHO05D005363 3.8e-70 269.2 264 61.4
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 1.1e-61 241.1 226 57.5
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 4.1e-56 222.6 274 48.9
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 5.3e-56 222.2 231 51.9
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 9.1e-56 221.5 274 50.4
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 1.7e-54 217.2 274 49.3
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 2.9e-54 216.5 274 48.2
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.1e-53 214.5 263 48.7
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 1.1e-53 214.5 273 48.4
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.9e-53 213.8 259 49.8
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 1.9e-53 213.8 273 47.6
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 2.5e-53 213.4 273 48.4
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 2.5e-53 213.4 273 47.3
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 7.2e-53 211.8 289 45.0
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 9.4e-53 211.5 274 47.4
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 1.2e-52 211.1 276 47.1
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 1.2e-52 211.1 270 47.0
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 1.6e-52 210.7 255 49.0
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 3.6e-52 209.5 263 47.9
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 3.6e-52 209.5 274 45.6
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 4.7e-52 209.1 274 46.0
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 6.1e-52 208.8 275 47.6
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 8.0e-52 208.4 275 47.6
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 8.0e-52 208.4 269 47.2
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 1.4e-51 207.6 267 47.2
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.8e-51 207.2 274 46.0
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.8e-51 207.2 274 46.0
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.8e-51 207.2 247 49.0
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 2.3e-51 206.8 260 48.8
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.3e-51 206.8 275 47.3
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 3.0e-51 206.5 267 45.7
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 3.0e-51 206.5 275 45.8
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 4.0e-51 206.1 251 49.0
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 8.8e-51 204.9 274 46.4
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 1.2e-50 204.5 268 48.5
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 1.5e-50 204.1 266 46.2
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 1.5e-50 204.1 279 44.4
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 1.5e-50 204.1 256 47.3
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 2.0e-50 203.8 264 47.7
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 3.3e-50 203.0 279 44.4
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 3.3e-50 203.0 266 46.6
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 3.3e-50 203.0 268 45.9
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 5.7e-50 202.2 261 45.6
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 5.7e-50 202.2 268 46.3
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 7.5e-50 201.8 274 46.0
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 9.7e-50 201.4 261 45.6
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 9.7e-50 201.4 261 45.6
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.3e-49 201.1 267 46.8
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 1.7e-49 200.7 268 45.9
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 2.2e-49 200.3 267 46.8
Cpa.g.c29767.1 Carica papaya HOM05D004333 ORTHO05D005363 2.8e-49 199.9 277 44.8
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 1.1e-48 198.0 267 46.4
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-48 198.0 267 46.4
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-48 198.0 267 46.4
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 1.1e-48 198.0 266 46.2
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 2.4e-48 196.8 261 44.8
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 2.4e-48 196.8 250 47.2
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 2.4e-48 196.8 238 49.2
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 2.4e-48 196.8 273 43.2
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.1e-48 196.1 267 45.7
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 5.3e-48 195.7 274 44.5
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 5.3e-48 195.7 254 46.5
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 5.3e-48 195.7 266 44.0
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 7.0e-48 195.3 267 46.1
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 1.2e-47 194.5 266 45.5
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 4.5e-47 192.6 263 45.6
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 4.5e-47 192.6 263 45.6
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 5.9e-47 192.2 256 46.1
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 7.7e-47 191.8 261 43.7
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 1.0e-46 191.4 274 42.7
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 1.7e-46 190.7 250 47.2
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 2.9e-46 189.9 274 40.9
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 2.9e-46 189.9 261 43.3
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 5.0e-46 189.1 256 46.1
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 1.1e-45 188.0 259 43.2
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 1.2e-44 184.5 261 43.7
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 1.2e-44 184.5 261 43.7
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 3.0e-43 179.9 262 42.4
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 5.2e-43 179.1 274 42.7
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 6.8e-43 178.7 244 45.5
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 8.8e-43 178.3 269 41.3
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 2.0e-42 177.2 261 42.1
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 3.4e-42 176.4 243 45.3
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 4.4e-42 176.0 261 41.4
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.3e-41 174.5 243 44.9
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 2.2e-41 173.7 240 40.0
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 2.2e-41 173.7 263 41.8
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.8e-40 170.6 255 41.2
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 1.2e-39 167.9 235 43.4
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 1.6e-39 167.5 235 43.0
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 3.5e-39 166.4 274 39.8
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 2.9e-38 163.3 264 39.8
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 6.6e-38 162.2 274 37.2
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 3.3e-37 159.8 257 39.3
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 4.4e-34 149.4 262 37.0
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 1.3e-33 147.9 284 35.2
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 2.8e-33 146.7 222 41.4
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 6.6e-30 135.6 265 35.8
SEGI_24760 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 8.6e-30 135.2 283 32.2
SHI08278 Sapria himalayana HOM05D004333 ORTHO05D005363 1.4e-27 127.9 243 33.3
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 1.5e-21 107.8 156 41.0
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 2.1e-20 104.0 123 43.1
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 2.8e-20 103.6 123 44.7
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 4.4e-18 96.3 105 49.5
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 1.5e-13 81.3 108 36.1
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 5.4e-08 62.8 110 36.4
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 7.8e-07 58.9 46 63.0


User provided reference genes

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