Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004178g0040 Nicotiana tabacum HOM05D004333 ORTHO05D005363 3.7e-105 384.8 184 100.0
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 6.2e-76 287.7 189 78.8
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 7.6e-74 280.8 189 77.2
CAN.G481.56 Capsicum annuum HOM05D004333 ORTHO05D005363 5.6e-69 264.6 189 72.5
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 2.1e-68 262.7 189 72.0
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 1.1e-64 250.4 189 68.3
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 1.3e-54 216.9 185 58.4
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 5.1e-54 214.9 187 59.4
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 4.3e-53 211.8 185 57.3
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 5.6e-53 211.5 184 60.3
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 7.3e-53 211.1 187 56.1
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.3e-52 210.3 186 59.1
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 1.6e-52 209.9 186 57.0
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 2.8e-52 209.1 187 57.2
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 1.1e-51 207.2 184 58.7
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 1.4e-51 206.8 186 54.8
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 3.1e-51 205.7 185 54.6
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 5.3e-51 204.9 187 57.2
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 9.0e-51 204.1 185 54.1
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 1.2e-50 203.8 186 58.1
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 1.2e-50 203.8 186 52.2
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 2.6e-50 202.6 187 56.1
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 3.4e-50 202.2 179 59.8
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 4.5e-50 201.8 176 59.7
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 4.5e-50 201.8 186 52.2
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 7.6e-50 201.1 187 56.1
VMungo1309G1648 Vigna mungo HOM05D004333 ORTHO05D005363 1.7e-49 199.9 185 55.1
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 2.9e-49 199.1 187 55.1
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 2.9e-49 199.1 188 54.8
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 4.9e-49 198.4 186 54.8
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 4.9e-49 198.4 185 54.1
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 6.4e-49 198.0 219 48.4
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 8.4e-49 197.6 187 55.1
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 8.4e-49 197.6 219 48.4
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 1.1e-48 197.2 187 54.5
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-48 197.2 219 48.4
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.1e-48 197.2 219 48.4
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 1.1e-48 197.2 188 51.1
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 1.4e-48 196.8 185 54.1
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.4e-48 196.8 219 48.9
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 1.9e-48 196.4 186 55.4
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 1.9e-48 196.4 201 53.7
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 2.4e-48 196.1 185 54.6
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 2.4e-48 196.1 187 52.9
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 3.2e-48 195.7 185 53.0
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 5.4e-48 194.9 219 47.9
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 7.1e-48 194.5 186 53.2
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 2.7e-47 192.6 186 50.5
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 2.7e-47 192.6 184 51.6
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 3.5e-47 192.2 196 50.0
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 4.6e-47 191.8 187 51.3
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 1.3e-46 190.3 184 51.6
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 3.0e-46 189.1 187 51.3
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 3.9e-46 188.7 187 53.5
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 5.1e-46 188.3 184 50.5
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 5.1e-46 188.3 188 50.0
Gohir.A09G185800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 6.7e-46 188.0 186 50.0
Eucgr.D00250 Eucalyptus grandis HOM05D004333 ORTHO05D005363 1.1e-45 187.2 185 50.8
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.1e-45 187.2 188 50.0
Gohir.D09G180800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 1.5e-45 186.8 188 50.0
Gorai.006G202800 Gossypium raimondii HOM05D004333 ORTHO05D005363 1.5e-45 186.8 188 50.0
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 1.5e-45 186.8 178 52.8
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 2.5e-45 186.0 187 49.2
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 3.3e-45 185.7 187 52.9
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 3.3e-45 185.7 185 51.9
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 5.6e-45 184.9 188 49.5
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 5.6e-45 184.9 184 52.7
Aa31LG11G3970 Aethionema arabicum HOM05D004333 ORTHO05D005363 7.4e-45 184.5 187 49.2
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 9.6e-45 184.1 187 50.8
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.6e-44 183.3 185 50.3
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 2.8e-44 182.6 181 50.8
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 2.8e-44 182.6 187 49.2
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 4.8e-44 181.8 185 49.7
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 4.8e-44 181.8 187 49.2
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 8.1e-44 181.0 186 48.4
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 1.4e-43 180.3 176 46.6
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 1.4e-43 180.3 227 44.9
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.8e-43 179.9 184 47.3
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 2.4e-43 179.5 186 47.8
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 5.3e-43 178.3 185 47.0
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 6.9e-43 177.9 176 45.5
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 9.0e-43 177.6 176 47.2
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 1.2e-42 177.2 176 47.7
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 1.2e-42 177.2 176 46.6
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 1.5e-42 176.8 176 46.0
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 3.4e-42 175.6 176 46.0
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 1.0e-41 174.1 176 46.0
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 2.9e-41 172.6 175 51.4
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 3.8e-41 172.2 185 45.9
Carub.0006s2217 Capsella rubella HOM05D004333 ORTHO05D005363 3.2e-40 169.1 176 43.8
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 4.6e-39 165.2 199 41.7
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 4.6e-39 165.2 192 44.3
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 1.8e-38 163.3 203 40.9
Oeu001936.1 Olea europaea HOM05D004333 ORTHO05D005363 6.7e-38 161.4 150 56.0
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 1.9e-37 159.8 178 45.5
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 3.3e-37 159.1 180 46.1
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 1.6e-36 156.8 150 52.7
CSS0044449 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 5.3e-35 151.8 142 54.9
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 3.8e-33 145.6 139 49.6
HPP92_002817 Vanilla planifolia HOM05D004333 ORTHO05D005363 1.9e-32 143.3 181 42.0
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 3.0e-30 136.0 101 62.4
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 3.9e-30 135.6 101 62.4
SHI08286 Sapria himalayana HOM05D004333 ORTHO05D005363 1.4e-24 117.1 140 42.1
CSS0041108 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 5.5e-24 115.2 128 48.4
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 3.3e-21 105.9 169 39.6
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 5.7e-21 105.1 161 37.3
Psat0s2221g0080 Pisum sativum HOM05D004333 ORTHO05D005363 8.2e-20 101.3 109 53.2
SEGI_10720 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 2.9e-17 92.8 138 37.7
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 8.5e-17 91.3 191 31.4
SalBow4G2088 Salvia bowleyana HOM05D004333 ORTHO05D005363 4.7e-15 85.5 80 50.0
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 1.4e-14 84.0 206 30.6
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 1.7e-12 77.0 115 34.8
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 2.2e-12 76.6 145 33.1
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 2.0e-10 70.1 135 31.1


User provided reference genes

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