Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.2e-213 744.2 396 100.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 9.4e-114 414.5 253 89.3
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.0e-112 409.1 253 87.0
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 6.8e-104 381.7 259 79.2
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 8.3e-102 374.8 253 81.0
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.8e-101 373.6 253 79.8
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 7.0e-101 371.7 253 79.8
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 5.7e-95 352.1 253 75.1
Nitab4.5_0013152g0010 Nicotiana tabacum HOM05D000015 ORTHO05D000803 2.1e-65 253.8 146 93.8
Nitab4.5_0001881g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 1.6e-57 227.6 131 93.1
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 7.1e-53 212.2 254 46.9
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 7.8e-52 208.8 254 44.9
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 4.8e-49 199.5 254 42.9
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 3.1e-48 196.8 258 45.7
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 9.0e-48 195.3 261 44.4
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.3e-46 191.4 255 46.7
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 1.3e-46 191.4 259 44.0
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 1.4e-45 188.0 251 47.0
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.6e-44 184.5 254 44.1
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 6.0e-44 182.6 254 42.1
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 3.9e-43 179.9 257 43.2
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 6.7e-43 179.1 265 41.9
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 3.3e-42 176.8 252 41.7
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 2.1e-41 174.1 251 41.0
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 2.8e-41 173.7 251 42.6
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.4e-40 171.4 262 42.0
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.4e-40 171.4 251 40.6
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 4.0e-40 169.9 245 41.6
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 9.0e-40 168.7 254 44.1
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.2e-39 168.3 253 44.3
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 2.0e-39 167.5 236 39.8
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 3.4e-39 166.8 260 39.6
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.8e-39 166.0 251 39.0
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.8e-39 166.0 251 39.4
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.0e-38 165.2 253 41.1
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 2.2e-38 164.1 251 43.0
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.8e-38 163.3 254 38.6
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 4.9e-38 162.9 251 39.0
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 4.9e-38 162.9 251 39.0
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 6.5e-38 162.5 258 41.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 2.5e-37 160.6 256 39.5
Nitab4.5_0001593g0020 Nicotiana tabacum HOM05D008559 ORTHO05D007738 3.2e-37 160.2 112 77.7
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.2e-37 159.8 252 42.1
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 4.2e-37 159.8 261 39.1
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 5.5e-37 159.5 249 41.0
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.2e-36 158.3 255 40.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.2e-36 158.3 254 40.9
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 1.6e-36 157.9 249 41.4
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.1e-36 157.5 260 40.8
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 7.9e-36 155.6 253 39.9
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.3e-35 154.8 251 38.2
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.3e-35 154.8 260 41.5
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.3e-35 154.1 256 38.7
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 3.0e-35 153.7 255 38.4
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.9e-35 153.3 242 43.8
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 5.1e-35 152.9 253 38.7
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 6.7e-35 152.5 236 39.8
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.1e-34 151.8 264 40.2
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.9e-34 151.0 262 38.5
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.9e-34 151.0 234 39.7
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 4.3e-34 149.8 257 36.6
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.7e-34 149.4 235 38.7
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 9.6e-34 148.7 253 38.3
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.6e-33 147.9 256 37.9
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 8.2e-33 145.6 233 39.9
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.4e-32 144.1 255 37.3
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.1e-32 143.7 258 37.6
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 4.0e-32 143.3 256 39.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 6.9e-32 142.5 256 35.5
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.2e-31 141.7 256 35.9
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 3.4e-31 140.2 258 37.6
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.3e-30 138.3 229 40.2
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.2e-30 137.5 258 37.6
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 5.0e-30 136.3 257 34.6
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 6.5e-30 136.0 257 35.8
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.1e-29 135.2 257 38.5
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 3.2e-29 133.7 256 35.5
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 5.5e-29 132.9 257 34.2
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 5.5e-29 132.9 252 35.7
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.1e-28 131.0 240 37.1
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 2.1e-28 131.0 252 37.3
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 2.7e-28 130.6 258 35.3
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 3.5e-28 130.2 249 36.1
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 6.1e-28 129.4 258 34.9
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 7.9e-28 129.0 258 34.5
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.3e-27 128.3 254 34.6
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 5.1e-27 126.3 240 35.8
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.1e-27 126.3 260 37.3
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.5e-26 124.8 239 35.6
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.5e-26 124.8 239 35.6
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.9e-26 124.4 242 40.1
Nitab4.5_0013856g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.3e-26 123.2 90 73.3
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 5.7e-26 122.9 226 36.3
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.6e-25 121.3 214 38.8
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 4.8e-25 119.8 228 36.8
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 9.0e-24 115.5 260 36.9
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.0e-22 112.1 287 31.7
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 2.2e-22 110.9 234 34.6
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.5e-21 107.5 162 40.7
Nitab4.5_0013152g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.4e-21 105.5 145 52.4
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 9.7e-18 95.5 167 36.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 3.7e-17 93.6 265 30.6
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 1.2e-15 88.6 156 38.5
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.2e-13 80.1 170 32.4
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 7.9e-12 75.9 240 30.8
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 8.8e-11 72.4 269 28.6
Nitab4.5_0005739g0030 Nicotiana tabacum HOM05D016139 ORTHO05D286777 1.2e-07 62.0 53 67.9
Nitab4.5_0002809g0060 Nicotiana tabacum HOM05D016139 ORTHO05D284185 2.6e-07 60.8 53 67.9
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.0e-06 58.9 97 35.1
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.0e-06 58.9 73 47.9


User provided reference genes

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