Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 0.0e+00 1393.6 707 100.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 0.0e+00 1191.8 722 86.4
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 0.0e+00 1147.1 712 82.9
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 0.0e+00 1139.4 712 83.1
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 0.0e+00 1084.3 641 86.3
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 6.8e-224 781.2 711 57.7
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 2.2e-222 776.2 725 57.7
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 1.7e-219 766.5 713 57.1
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.2e-212 743.8 711 55.6
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 4.3e-210 735.3 672 56.4
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 1.1e-208 730.7 793 51.2
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 2.0e-207 726.5 709 56.1
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 9.9e-207 724.2 681 57.6
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 6.4e-206 721.5 716 55.3
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 3.2e-205 719.2 618 60.7
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 5.1e-203 711.8 664 56.6
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 1.9e-202 709.9 667 56.8
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 8.4e-198 694.5 707 52.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 5.5e-197 691.8 712 52.7
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 2.1e-196 689.9 715 52.6
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.5e-194 683.7 720 52.8
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.1e-193 679.9 661 54.5
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 4.0e-192 675.6 709 51.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 9.0e-192 674.5 718 52.5
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.6e-191 672.9 620 57.6
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 3.4e-191 672.5 664 54.5
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 3.4e-191 672.5 719 51.5
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 5.8e-191 671.8 718 52.6
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 7.6e-191 671.4 715 51.3
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.0e-190 671.0 634 52.8
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.0e-190 671.0 710 51.8
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.3e-190 670.6 716 52.0
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 9.3e-189 664.5 676 53.4
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.2e-188 664.1 663 51.6
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.6e-188 663.7 646 55.1
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 2.7e-188 662.9 715 51.3
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 3.5e-188 662.5 665 51.7
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.0e-187 661.0 719 51.6
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 1.3e-187 660.6 676 53.1
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 2.3e-187 659.8 715 50.8
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 3.0e-187 659.4 716 51.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.0e-187 659.4 664 52.1
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.1e-187 658.7 664 52.0
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 6.7e-187 658.3 713 51.2
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.1e-186 657.5 664 51.8
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 1.1e-186 657.5 715 51.7
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 5.7e-186 655.2 720 50.7
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.7e-186 654.4 664 51.7
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 8.2e-185 651.4 655 54.2
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 6.9e-184 648.3 720 50.7
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.5e-183 647.1 718 50.6
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.3e-182 644.0 635 54.5
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 3.8e-182 642.5 708 50.4
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.1e-178 630.9 620 56.0
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.9e-178 630.2 686 51.5
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 4.3e-178 629.0 660 51.2
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.7e-177 627.1 711 49.1
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 4.8e-177 625.5 727 49.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 4.1e-176 622.5 723 48.4
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 2.6e-175 619.8 637 53.4
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.0e-174 617.8 712 49.0
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 1.3e-174 617.5 705 50.4
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.9e-173 613.6 702 48.3
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 1.2e-172 610.9 714 48.2
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.6e-172 610.5 711 49.4
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 3.6e-172 609.4 633 51.5
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.6e-172 609.4 645 52.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 7.9e-172 608.2 677 48.6
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 6.7e-171 605.1 699 48.4
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 3.1e-168 596.3 720 46.9
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 4.1e-168 595.9 698 47.4
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 4.1e-168 595.9 698 47.4
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 5.3e-168 595.5 701 47.5
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.5e-167 594.0 676 50.4
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 4.5e-167 592.4 700 47.0
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.5e-167 592.4 369 82.7
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 8.5e-166 588.2 370 79.5
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.4e-157 558.1 624 48.9
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 3.7e-153 546.2 532 52.6
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 7.0e-152 542.0 342 82.2
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 5.0e-150 535.8 478 58.6
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 3.2e-149 533.1 491 57.6
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 5.5e-149 532.3 728 43.7
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 7.5e-146 521.9 490 56.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.8e-144 517.3 674 45.5
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 5.4e-144 515.8 595 50.3
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 9.1e-144 515.0 694 46.5
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.7e-142 510.8 715 44.2
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 3.0e-139 500.0 532 52.6
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.2e-138 498.0 344 76.7
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 5.4e-136 489.2 528 52.3
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 9.2e-136 488.4 595 48.7
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 2.2e-129 467.2 502 50.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 3.9e-126 456.4 347 66.3
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 9.5e-125 451.8 379 60.9
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.9e-120 437.6 310 70.0
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 8.9e-115 418.7 650 40.5
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.4e-113 412.5 253 87.0
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 7.3e-109 399.1 336 61.3
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 4.0e-107 393.3 407 53.6
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 4.7e-100 369.8 656 37.8
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 9.3e-96 355.5 305 60.0
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 2.3e-86 324.3 696 32.0
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 5.3e-75 286.6 639 33.6
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.1e-71 274.6 318 49.7
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 5.1e-70 270.0 612 32.5
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 3.7e-68 263.8 558 34.4
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 5.1e-62 243.4 325 41.5
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.5e-61 241.9 387 39.8
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.5e-57 226.5 199 63.8
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 4.4e-53 213.8 327 41.0
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 3.7e-44 184.1 174 52.3
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 4.1e-43 180.6 183 53.0
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.7e-41 175.3 208 46.6
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.5e-40 172.2 129 60.5
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-36 159.1 243 40.3
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 4.1e-35 154.1 124 60.5
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.4e-27 127.1 140 45.0
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 3.3e-24 117.9 170 41.2
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 5.2e-22 110.5 135 48.1
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.2e-19 101.3 303 31.4
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.5e-16 92.4 78 52.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.1e-15 88.6 77 55.8
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 4.7e-15 87.4 177 35.0
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 1.8e-14 85.5 117 41.9
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 4.1e-11 74.3 214 27.6
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 1.6e-10 72.4 236 27.1
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 1.1e-08 66.2 166 31.3
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.1e-08 66.2 115 37.4


User provided reference genes

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