Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004048g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.3e-63 246.1 117 100.0
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.6e-51 205.3 145 71.7
Nitab4.5_0000894g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 8.8e-44 180.3 144 64.6
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.6e-43 178.7 146 64.4
Nitab4.5_0002837g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.7e-43 177.6 144 62.5
Nitab4.5_0001659g0050 Nicotiana tabacum HOM05D007931 ORTHO05D014660 2.1e-37 159.1 125 66.4
Nitab4.5_0012359g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.7e-37 157.9 129 62.0
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 5.9e-32 141.0 135 57.0
Nitab4.5_0010531g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.7e-31 139.4 112 62.5
CAN.G155.11 Capsicum annuum HOM05D007931 ORTHO05D000126 8.6e-31 137.1 115 60.9
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 4.3e-30 134.8 75 84.0
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 1.6e-29 132.9 80 72.5
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.3e-28 129.0 79 70.9
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 9.8e-27 123.6 79 69.6
Nitab4.5_0000128g0370 Nicotiana tabacum HOM05D007931 ORTHO05D000126 7.0e-25 117.5 141 46.8
Nitab4.5_0001243g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-20 102.8 174 35.1
Nitab4.5_0005181g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.3e-20 102.4 52 86.5
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.1e-17 93.6 48 91.7
Cc00_g29920 Coffea canephora HOM05D000003 ORTHO05D000126 3.2e-17 92.0 75 49.3
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 2.3e-15 85.9 56 67.9
Nitab4.5_0005708g0030 Nicotiana tabacum HOM05D007931 ORTHO05D000126 1.5e-14 83.2 57 66.7
PGSC0003DMG400040885 Solanum tuberosum HOM05D007931 ORTHO05D010331 3.3e-14 82.0 49 71.4
SGA_v2.0_scaffold7G03666 Striga asiatica HOM05D000198 ORTHO05D005702 4.3e-14 81.6 67 44.8
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-12 76.3 103 36.9
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 4.0e-12 75.1 67 49.3
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.9e-12 73.9 68 39.7
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 7.5e-11 70.9 84 36.9
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.3e-10 70.1 77 40.3
TWI34G0137 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.9e-10 68.9 86 41.9
Nitab4.5_0011919g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.2e-09 65.5 41 73.2
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 3.2e-09 65.5 116 31.9
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-09 65.1 82 36.6
Dinv18185 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-09 65.1 67 43.3
Nitab4.5_0001383g0080 Nicotiana tabacum HOM05D007931 ORTHO05D000126 5.4e-09 64.7 40 70.0
QL03p061024 Quercus lobata HOM05D000003 ORTHO05D000126 9.2e-09 63.9 72 37.5
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.2e-09 63.9 68 35.3
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 1.2e-08 63.5 69 40.6
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.6e-08 63.2 58 44.8
QL05p028700 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-08 63.2 94 31.9
QL06p021500 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-08 63.2 94 31.9
QL05p028665 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-08 62.4 94 31.9
QL05p045613 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-08 62.0 67 37.3
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.6e-08 61.6 58 44.8
Atru.chr7.382 Acer truncatum HOM05D000003 ORTHO05D000126 6.0e-08 61.2 66 34.8
CSS0018636 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 6.0e-08 61.2 70 40.0
Dinv06062 Davidia involucrata HOM05D000003 ORTHO05D000126 6.0e-08 61.2 70 40.0
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.0e-08 61.2 76 30.3
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.0e-08 61.2 76 30.3
TWI38G2069 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 6.0e-08 61.2 77 36.4
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 7.8e-08 60.8 75 38.7
Atru.chr5.1805 Acer truncatum HOM05D000003 ORTHO05D000126 7.8e-08 60.8 72 36.1
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 7.8e-08 60.8 64 40.6
QL03p060940 Quercus lobata HOM05D000005 ORTHO05D000012 7.8e-08 60.8 72 36.1
QL04p009995 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-07 60.5 73 34.2
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.0e-07 60.5 55 41.8
SGA_v2.0_scaffold54G19489 Striga asiatica HOM05D010621 ORTHO05D000126 1.0e-07 60.5 81 34.6
QL04p011564 Quercus lobata HOM05D000009 ORTHO05D000126 1.3e-07 60.1 78 32.1
QL05p054887 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-07 60.1 72 33.3
QL10p065510 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-07 59.7 74 36.5
QL93p0120_0010 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-07 59.7 64 35.9
Haze_24509 Corylus avellana HOM05D000003 ORTHO05D000126 2.3e-07 59.3 70 35.7
QL01p000768 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-07 59.3 63 36.5
QL03p018940 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-07 59.3 94 31.9
QL10p031737 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-07 59.3 76 32.9
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.3e-07 59.3 76 30.3
TWI38G1337 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.3e-07 59.3 79 36.7
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 3.0e-07 58.9 74 33.8
Lj2P989T21 Lonicera japonica HOM05D000003 ORTHO05D000126 3.0e-07 58.9 73 38.4
Lj9C38T11 Lonicera japonica HOM05D000003 ORTHO05D000126 3.0e-07 58.9 73 38.4
QL04p091229 Quercus lobata HOM05D000003 ORTHO05D000006 3.0e-07 58.9 76 30.3
QL10p058267 Quercus lobata HOM05D000003 ORTHO05D000126 3.0e-07 58.9 61 37.7
Atru.chr1.3557 Acer truncatum HOM05D000003 ORTHO05D000126 3.9e-07 58.5 70 34.3
Haze_06008 Corylus avellana HOM05D000003 ORTHO05D000126 3.9e-07 58.5 66 28.8
QL02p054646 Quercus lobata HOM05D000003 ORTHO05D000126 3.9e-07 58.5 76 32.9
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 3.9e-07 58.5 57 35.1
Atru.chr1.2555 Acer truncatum HOM05D000003 ORTHO05D000126 5.1e-07 58.2 72 34.7
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.1e-07 58.2 76 32.9
Atru.chr1.1793 Acer truncatum HOM05D000003 ORTHO05D000126 6.6e-07 57.8 67 37.3
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 6.6e-07 57.8 72 37.5
CSS0015504 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 6.6e-07 57.8 64 42.2
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 6.6e-07 57.8 75 34.7
Rhsim10G0112300 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.6e-07 57.8 68 35.3
Atru.chr8.603 Acer truncatum HOM05D000003 ORTHO05D000126 8.6e-07 57.4 75 37.3
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 8.6e-07 57.4 67 40.3
QL08p037895 Quercus lobata HOM05D000003 ORTHO05D000126 8.6e-07 57.4 76 31.6
QL12p041140 Quercus lobata HOM05D000003 ORTHO05D000126 8.6e-07 57.4 63 34.9
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.1e-06 57.0 67 40.3
QL02p016877 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 57.0 68 33.8
QL11p054030 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-06 57.0 71 35.2
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 1.5e-06 56.6 72 37.5
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-06 56.6 65 36.9
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-06 56.6 58 39.7
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.5e-06 56.6 78 33.3
Sed0016457 Sechium edule HOM05D000003 ORTHO05D000126 1.5e-06 56.6 74 35.1
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.9e-06 56.2 65 35.4
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 1.9e-06 56.2 69 34.8
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 1.9e-06 56.2 69 34.8
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 56.2 64 34.4
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-06 56.2 65 36.9
Rhsim03G0079400 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.9e-06 56.2 74 28.4
Rhsim03G0080000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.9e-06 56.2 74 28.4
SGA_v2.0_scaffold302G47838 Striga asiatica HOM05D044967 ORTHO05D000126 1.9e-06 56.2 103 29.1
Atru.chr2.2359 Acer truncatum HOM05D000003 ORTHO05D000126 2.5e-06 55.8 67 35.8
Haze_05455 Corylus avellana HOM05D000003 ORTHO05D000126 2.5e-06 55.8 63 30.2
Sed0019411 Sechium edule HOM05D000003 ORTHO05D000126 2.5e-06 55.8 70 35.7
Atru.chr13.2168 Acer truncatum HOM05D000003 ORTHO05D000126 3.3e-06 55.5 70 34.3
CSS0041731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.3e-06 55.5 69 39.1
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.3e-06 55.5 64 39.1
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 3.3e-06 55.5 70 35.7
QL01p029685 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-06 55.5 65 29.2
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-06 55.5 64 31.2
QL05p070403 Quercus lobata HOM05D000003 ORTHO05D000126 3.3e-06 55.5 61 32.8
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.3e-06 55.5 65 30.8
TWI39G0375 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.3e-06 55.5 69 33.3
TWI56G0633 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.3e-06 55.5 69 33.3
Atru.chr10.539 Acer truncatum HOM05D000003 ORTHO05D000126 4.3e-06 55.1 71 36.6
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 4.3e-06 55.1 63 34.9
CSS0004935 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.3e-06 55.1 64 40.6
CSS0016982 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.3e-06 55.1 64 40.6
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.3e-06 55.1 64 31.2
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 4.3e-06 55.1 68 39.7
Gorai.010G174400 Gossypium raimondii HOM05D000003 ORTHO05D000126 4.3e-06 55.1 82 30.5
QL10p022609 Quercus lobata HOM05D000003 ORTHO05D000126 4.3e-06 55.1 77 35.1
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.3e-06 55.1 83 28.9
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.3e-06 55.1 83 28.9
Atru.chr13.2021 Acer truncatum HOM05D000003 ORTHO05D000126 5.6e-06 54.7 71 33.8
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 5.6e-06 54.7 63 36.5
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 5.6e-06 54.7 59 40.7
Lj6P401T12 Lonicera japonica HOM05D000003 ORTHO05D000126 5.6e-06 54.7 69 31.9
QL04p035033 Quercus lobata HOM05D000003 ORTHO05D000126 5.6e-06 54.7 63 30.2
QL05p063451 Quercus lobata HOM05D000003 ORTHO05D000126 5.6e-06 54.7 80 32.5
QL10p048926 Quercus lobata HOM05D040061 ORTHO05D000126 5.6e-06 54.7 64 34.4
QL10p049611 Quercus lobata HOM05D040061 ORTHO05D000126 5.6e-06 54.7 64 34.4
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 7.3e-06 54.3 64 35.9
FvH4_3g05891 Fragaria vesca HOM05D000003 ORTHO05D000126 7.3e-06 54.3 75 37.3
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 7.3e-06 54.3 63 30.2
QL09p012273 Quercus lobata HOM05D000003 ORTHO05D000126 7.3e-06 54.3 59 37.3
Rhsim03G0009600 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.3e-06 54.3 103 27.2
Atru.chr10.111 Acer truncatum HOM05D000003 ORTHO05D000126 9.5e-06 53.9 69 34.8
Atru.chr10.94 Acer truncatum HOM05D000003 ORTHO05D000126 9.5e-06 53.9 69 34.8
Atru.chr4.991 Acer truncatum HOM05D000003 ORTHO05D000126 9.5e-06 53.9 61 36.1
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 9.5e-06 53.9 61 34.4
QL04p060974 Quercus lobata HOM05D000003 ORTHO05D000126 9.5e-06 53.9 62 29.0


User provided reference genes

Program Settings