Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 9.1e-171 603.6 328 100.0
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 4.8e-148 528.1 314 93.0
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 2.0e-125 453.0 313 79.9
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 1.3e-124 450.3 315 78.4
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 4.0e-118 428.7 302 80.1
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 9.2e-115 417.5 314 75.5
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 7.6e-109 397.9 313 75.4
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 2.1e-95 353.2 315 62.5
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 1.7e-92 343.6 311 60.5
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 2.4e-86 323.2 221 81.9
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 1.5e-85 320.5 289 65.1
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 1.7e-84 317.0 269 65.8
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 3.9e-81 305.8 255 64.3
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 1.9e-80 303.5 265 66.0
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 4.3e-80 302.4 242 69.4
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 1.3e-79 300.8 314 55.7
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 1.6e-79 300.4 177 80.8
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 2.1e-79 300.1 243 67.1
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 1.2e-77 294.3 318 55.7
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 1.5e-77 293.9 219 66.7
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 2.0e-77 293.5 238 64.3
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 2.6e-77 293.1 278 59.7
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 4.5e-77 292.4 266 59.0
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 5.8e-77 292.0 275 58.5
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 7.6e-77 291.6 266 58.6
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 1.3e-76 290.8 206 71.8
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 1.3e-76 290.8 238 63.4
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 1.7e-76 290.4 245 62.9
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 1.7e-76 290.4 227 67.4
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 8.4e-76 288.1 209 67.5
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 1.4e-75 287.3 245 61.6
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 4.2e-75 285.8 266 58.3
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 7.1e-75 285.0 265 62.3
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 9.3e-75 284.6 226 67.3
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 2.1e-74 283.5 285 59.6
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 2.1e-74 283.5 229 62.9
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 3.5e-74 282.7 192 71.9
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 3.5e-74 282.7 176 75.0
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 4.6e-74 282.3 177 75.7
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 7.9e-74 281.6 177 76.3
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 7.9e-74 281.6 185 71.9
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 7.9e-74 281.6 238 63.4
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 1.0e-73 281.2 185 71.9
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 1.0e-73 281.2 306 55.6
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 1.0e-73 281.2 181 75.1
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 1.8e-73 280.4 178 75.3
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 2.3e-73 280.0 176 76.1
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 2.3e-73 280.0 176 76.1
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 2.3e-73 280.0 240 65.4
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 3.0e-73 279.6 312 55.1
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 3.9e-73 279.3 181 74.0
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 5.1e-73 278.9 173 74.0
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 8.7e-73 278.1 238 62.6
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 1.5e-72 277.3 244 60.7
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 1.9e-72 276.9 247 59.1
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 5.7e-72 275.4 220 62.3
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 7.4e-72 275.0 220 62.3
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 9.6e-72 274.6 177 75.7
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 1.3e-71 274.2 172 76.7
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 1.6e-71 273.9 180 72.2
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 2.8e-71 273.1 164 80.5
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 4.8e-71 272.3 219 68.0
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 4.8e-71 272.3 219 68.0
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 6.3e-71 271.9 266 61.3
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 1.1e-70 271.2 300 53.7
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 2.4e-70 270.0 219 67.6
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 3.1e-70 269.6 340 52.4
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 6.9e-70 268.5 175 72.0
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 9.0e-70 268.1 206 68.0
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 1.2e-69 267.7 245 56.7
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 1.2e-69 267.7 187 73.3
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 1.5e-69 267.3 316 59.2
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 2.6e-69 266.5 284 54.6
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 3.4e-69 266.2 282 56.4
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 7.6e-69 265.0 238 64.3
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 1.3e-68 264.2 296 53.4
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 2.2e-68 263.5 227 59.0
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 2.9e-68 263.1 317 53.3
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 2.9e-68 263.1 291 56.7
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 1.1e-67 261.2 221 62.9
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 1.9e-67 260.4 349 48.4
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 1.9e-67 260.4 182 68.7
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 2.5e-67 260.0 247 56.7
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 7.2e-67 258.5 232 57.8
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 9.3e-67 258.1 219 60.7
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 9.3e-67 258.1 219 60.7
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 2.1e-66 256.9 240 55.4
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 3.6e-66 256.1 285 52.6
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 3.6e-66 256.1 226 61.9
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 6.1e-66 255.4 215 63.3
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 1.8e-65 253.8 238 56.3
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 3.0e-65 253.1 225 60.4
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 6.7e-65 251.9 225 58.7
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 2.4e-62 243.4 162 71.6
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 6.9e-62 241.9 285 49.8
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 2.9e-60 236.5 216 60.2
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 3.8e-60 236.1 234 53.8
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.4e-59 234.2 168 68.5
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.3e-52 211.1 254 50.0
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 4.4e-48 196.1 126 75.4
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 4.2e-43 179.5 160 63.8
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 6.3e-39 165.6 197 49.2
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 5.9e-37 159.1 161 55.9
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 4.0e-33 146.4 149 53.0
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 1.7e-31 141.0 87 79.3
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 4.8e-31 139.4 104 71.2
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 6.3e-31 139.0 159 42.1
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 6.3e-31 139.0 159 42.1
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 3.1e-30 136.7 162 43.8
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 4.4e-24 116.3 95 50.5
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 7.5e-24 115.5 155 39.4
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 7.3e-19 99.0 97 53.6
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 1.2e-18 98.2 59 79.7
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 5.7e-16 89.4 77 57.1
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 9.2e-14 82.0 123 39.0
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 2.7e-13 80.5 65 58.5
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 2.7e-13 80.5 65 58.5
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 1.3e-12 78.2 101 38.6
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 1.1e-11 75.1 87 46.0
TAR633G1668 Trochodendron aralioides HOM05D006827 ORTHO05D023991 2.4e-06 57.4 97 40.2
VMungo1383G3461 Vigna mungo HOM05D006827 ORTHO05D008725 2.4e-06 57.4 90 40.0
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 5.4e-06 56.2 174 29.9


User provided reference genes

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