Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.7e-215 750.4 369 100.0
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.8e-210 734.6 384 95.3
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.7e-202 709.1 369 93.8
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.2e-197 692.2 373 90.9
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.1e-196 689.9 373 90.6
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.4e-196 689.5 373 90.6
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 6.6e-194 680.6 373 90.1
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 5.4e-188 661.0 373 87.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 4.6e-187 657.9 369 87.0
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.0e-186 656.8 375 86.4
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 1.7e-186 656.0 373 85.8
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.0e-186 655.2 375 86.1
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.3e-185 651.7 367 87.5
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.1e-183 646.7 373 85.8
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.8e-183 646.0 369 84.6
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 8.9e-183 643.7 373 85.0
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.5e-182 642.9 373 84.5
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.5e-182 642.9 374 84.2
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.0e-182 642.5 373 84.5
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 2.6e-182 642.1 367 86.4
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 5.8e-182 641.0 373 85.0
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 5.8e-182 641.0 373 84.5
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.7e-181 639.4 373 85.0
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 4.9e-181 637.9 373 83.9
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 2.4e-180 635.6 373 83.6
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 3.2e-180 635.2 374 84.8
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 5.4e-180 634.4 373 84.5
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.2e-179 633.3 373 84.2
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.2e-179 633.3 373 83.4
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.2e-179 633.3 373 83.6
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.6e-179 632.9 374 83.4
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 2.1e-179 632.5 373 84.2
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.1e-179 632.5 373 84.2
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.7e-179 632.1 374 82.9
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 3.5e-179 631.7 373 82.8
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 4.6e-179 631.3 373 83.9
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 4.6e-179 631.3 373 84.2
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.0e-178 630.2 373 83.4
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.0e-178 630.2 377 83.0
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.0e-178 630.2 374 82.6
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.7e-178 629.4 387 80.9
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 2.3e-178 629.0 373 83.9
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 3.9e-178 628.2 373 83.9
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 5.1e-178 627.9 373 82.8
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 6.6e-178 627.5 373 82.6
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.6e-178 627.5 373 83.6
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 8.6e-178 627.1 373 83.4
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 1.1e-177 626.7 373 83.1
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 3.3e-177 625.2 369 82.7
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 9.5e-177 623.6 400 78.2
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.8e-176 622.1 373 81.2
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.8e-176 622.1 370 83.2
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 3.6e-176 621.7 373 82.0
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 3.6e-176 621.7 374 82.6
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 4.7e-176 621.3 373 82.6
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 6.2e-176 620.9 380 82.4
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 6.2e-176 620.9 371 80.6
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 8.1e-176 620.5 368 83.2
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 1.1e-175 620.2 373 82.6
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.4e-175 619.8 374 81.8
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 1.8e-175 619.4 373 81.2
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.3e-175 619.0 373 82.8
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.8e-175 617.5 373 82.0
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.2e-174 616.7 374 81.3
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.2e-174 616.7 373 81.0
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 1.5e-174 616.3 373 82.3
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 1.5e-174 616.3 373 81.8
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.6e-174 615.5 373 81.8
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 2.6e-174 615.5 373 81.8
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 3.4e-174 615.1 371 82.2
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 9.9e-174 613.6 412 76.2
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 9.9e-174 613.6 369 81.6
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 2.2e-173 612.5 373 81.5
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 2.9e-173 612.1 373 81.5
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.9e-173 612.1 349 86.2
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 3.7e-173 611.7 373 81.5
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 3.7e-173 611.7 373 80.2
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 3.7e-173 611.7 373 79.9
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 6.4e-173 610.9 354 84.7
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.4e-173 610.9 373 80.7
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.4e-173 610.9 373 80.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 1.1e-172 610.1 373 81.2
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 1.1e-172 610.1 373 79.9
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 9.2e-172 607.1 366 80.9
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.6e-171 606.3 366 80.3
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.6e-171 606.3 371 81.1
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 2.1e-171 605.9 374 79.9
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 4.6e-171 604.7 364 82.4
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.3e-170 603.2 373 80.7
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 1.3e-170 603.2 367 82.3
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 2.3e-170 602.4 436 71.6
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 3.0e-170 602.1 373 79.6
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 3.9e-170 601.7 373 79.9
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 3.9e-170 601.7 366 81.4
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 5.1e-170 601.3 363 80.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.1e-169 600.1 373 79.9
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.3e-169 598.6 373 79.6
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 4.3e-169 598.2 373 79.9
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 7.3e-169 597.4 373 79.9
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 9.5e-169 597.0 366 80.3
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.2e-168 596.7 373 77.7
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 2.1e-168 595.9 373 79.1
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 4.7e-168 594.7 373 81.0
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 8.1e-168 594.0 362 81.2
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.1e-167 593.6 404 75.0
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.1e-167 593.6 373 79.4
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.4e-167 593.2 359 81.6
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.8e-167 592.8 364 78.8
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 8.9e-167 590.5 364 78.3
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 8.9e-167 590.5 364 78.3
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 8.9e-167 590.5 364 78.3
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 8.9e-167 590.5 364 78.3
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 8.9e-167 590.5 364 78.3
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 8.9e-167 590.5 375 80.5
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 3.4e-166 588.6 371 79.5
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 4.4e-166 588.2 372 79.6
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.7e-165 586.3 373 78.6
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.9e-165 585.5 371 78.4
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 3.8e-165 585.1 373 78.6
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.2e-164 582.0 353 82.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 6.0e-163 577.8 361 80.9
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.6e-162 574.3 350 81.1
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 1.5e-161 573.2 371 74.7
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 7.3e-161 570.9 371 74.7
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 1.2e-160 570.1 373 77.2
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 2.4e-159 565.8 373 75.3
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 4.4e-158 561.6 373 75.9
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.4e-156 555.8 354 78.5
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 5.4e-156 554.7 365 75.9
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 2.1e-155 552.7 357 76.5
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.5e-153 545.8 363 75.8
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 7.3e-153 544.3 367 73.3
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 9.6e-153 543.9 369 72.9
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 3.6e-152 542.0 368 72.6
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.4e-151 539.3 370 72.4
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.1e-151 538.9 365 73.2
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.6e-147 525.0 287 87.8
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.6e-144 516.5 373 66.0
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.7e-144 515.4 372 66.4
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.4e-143 513.5 373 66.5
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 3.1e-143 512.3 374 67.4
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 1.5e-142 510.0 364 69.5
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 1.3e-141 506.9 397 68.8
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.4e-140 503.4 372 65.1
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 6.7e-138 494.6 365 66.0
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 1.1e-137 493.8 374 65.5
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.6e-136 490.0 358 68.4
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.4e-135 486.9 276 85.1
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.0e-134 483.0 286 82.5
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 4.5e-134 481.9 375 66.9
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 5.8e-134 481.5 277 83.4
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.2e-132 475.3 369 64.0
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 5.5e-132 474.9 328 72.6
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 7.1e-132 474.6 326 73.9
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 1.9e-129 466.5 278 82.4
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.3e-128 463.8 367 67.6
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 4.1e-127 458.8 277 79.8
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 1.7e-125 453.4 279 80.6
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 2.9e-117 426.0 242 86.8
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 6.5e-117 424.9 389 55.8
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 2.3e-114 416.4 276 76.4
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.3e-114 416.4 370 54.9
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 8.2e-112 407.9 271 73.1
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 4.1e-111 405.6 275 71.3
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 2.6e-110 402.9 372 54.6
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.1e-108 397.5 402 51.5
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 6.1e-91 338.6 276 64.9
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.0e-90 337.8 198 82.8
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 5.2e-90 335.5 221 76.0
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 7.5e-89 331.6 195 80.5
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 7.5e-81 305.1 180 82.8
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 1.5e-68 264.2 171 77.2
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 1.5e-60 237.7 264 53.8
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 2.1e-46 190.7 376 31.6
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 6.9e-42 175.6 120 70.8
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 2.0e-41 174.1 148 62.8
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 4.4e-41 172.9 441 28.6
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.7e-40 171.0 120 69.2
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 3.2e-39 166.8 116 75.9
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 2.1e-38 164.1 403 27.0
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 1.3e-37 161.4 115 68.7
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 4.5e-33 146.4 297 31.6
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 6.9e-26 122.5 84 70.2
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 1.4e-07 61.6 46 69.6
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 3.2e-07 60.5 67 49.3


User provided reference genes

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