Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 5.6e-192 674.1 338 100.0
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 7.1e-187 657.1 338 97.6
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 2.5e-171 605.5 338 87.9
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 3.2e-171 605.1 338 88.2
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 1.6e-170 602.8 338 87.6
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 1.3e-156 556.6 338 82.5
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 1.0e-137 493.8 319 74.0
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 6.3e-135 484.6 339 69.9
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 7.0e-134 481.1 337 72.1
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 7.7e-133 477.6 340 68.8
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 7.7e-133 477.6 340 68.8
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 1.5e-131 473.4 326 69.3
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 2.7e-130 469.2 339 69.9
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 6.8e-129 464.5 341 68.3
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 3.4e-128 462.2 332 69.3
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 5.7e-128 461.5 330 69.4
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 2.8e-127 459.1 320 69.4
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 1.4e-126 456.8 315 69.8
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 4.1e-126 455.3 333 66.4
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 1.6e-125 453.4 328 67.4
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 2.7e-125 452.6 326 70.2
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 3.5e-125 452.2 318 70.1
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 3.5e-125 452.2 341 65.7
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 5.9e-125 451.4 343 64.7
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 1.7e-124 449.9 340 66.5
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 2.3e-124 449.5 326 67.8
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 7.3e-123 444.5 328 68.3
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 9.5e-123 444.1 339 66.1
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 1.6e-122 443.4 329 66.9
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 2.1e-122 443.0 345 64.1
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 1.4e-121 440.3 330 67.0
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 1.8e-121 439.9 335 62.7
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 1.8e-121 439.9 335 65.4
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 4.0e-121 438.7 342 64.6
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.6e-120 436.0 330 64.5
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 1.7e-119 433.3 339 62.2
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.9e-119 432.6 330 64.5
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 3.7e-119 432.2 324 64.8
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 8.3e-119 431.0 326 65.3
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.8e-118 429.9 339 62.8
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 5.4e-118 428.3 338 63.6
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 7.0e-118 427.9 340 62.6
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 9.2e-118 427.6 329 63.5
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.2e-117 427.2 328 64.6
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.2e-117 427.2 346 60.7
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 1.6e-117 426.8 329 63.8
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 2.7e-117 426.0 319 64.9
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 4.6e-117 425.2 328 64.0
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 5.9e-117 424.9 321 64.5
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 7.8e-117 424.5 328 63.4
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 2.3e-116 422.9 331 64.4
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 3.9e-116 422.2 322 65.8
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 8.6e-116 421.0 345 60.3
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 8.6e-116 421.0 340 61.8
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 8.6e-116 421.0 345 61.4
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 1.5e-115 420.2 328 62.2
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.5e-115 420.2 331 63.4
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 1.9e-115 419.9 333 65.2
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 1.9e-115 419.9 329 62.9
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 2.5e-115 419.5 329 62.9
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 3.3e-115 419.1 334 62.0
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 4.3e-115 418.7 341 61.0
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 4.3e-115 418.7 329 62.3
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 4.3e-115 418.7 329 62.3
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.6e-115 418.3 341 60.7
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.6e-115 418.3 341 60.7
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.3e-115 417.9 341 60.4
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 9.5e-115 417.5 331 63.4
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 1.2e-114 417.2 330 62.7
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.2e-114 417.2 331 61.3
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 1.2e-114 417.2 342 60.8
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 1.2e-114 417.2 342 60.8
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 2.1e-114 416.4 342 60.8
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 2.8e-114 416.0 316 64.2
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.6e-114 415.6 341 60.1
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 4.7e-114 415.2 345 60.3
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 6.2e-114 414.8 345 60.3
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 6.2e-114 414.8 345 60.0
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 6.2e-114 414.8 343 62.1
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 6.2e-114 414.8 326 62.3
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 1.0e-113 414.1 337 61.4
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 1.4e-113 413.7 331 61.9
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 1.8e-113 413.3 342 60.8
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 4.0e-113 412.1 333 61.3
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 4.0e-113 412.1 346 59.2
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 4.0e-113 412.1 333 61.6
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 5.2e-113 411.8 316 64.2
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 6.8e-113 411.4 345 60.3
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 8.9e-113 411.0 345 60.3
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 7.5e-112 407.9 261 75.1
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 8.3e-111 404.4 335 61.2
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 5.4e-110 401.7 371 56.3
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 7.0e-110 401.4 318 60.4
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 7.0e-110 401.4 345 58.0
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 9.2e-110 401.0 325 61.5
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 9.2e-110 401.0 321 61.7
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 2.7e-109 399.4 339 59.6
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.3e-108 396.4 315 60.0
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 8.6e-108 394.4 323 60.7
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 3.6e-106 389.0 323 59.8
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 4.7e-106 388.7 326 59.8
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 1.5e-104 383.6 329 58.4
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 2.6e-104 382.9 330 60.9
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 3.4e-104 382.5 331 59.5
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 4.4e-104 382.1 333 56.5
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 4.1e-102 375.6 316 58.5
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 2.7e-101 372.9 318 59.4
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 6.6e-100 368.2 316 57.6
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 5.6e-99 365.2 286 62.2
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 2.1e-93 346.7 252 66.3
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.3e-84 316.6 330 49.1
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 1.5e-83 313.9 323 47.4
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 2.4e-81 306.6 343 44.3
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 1.3e-68 264.2 318 41.2
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 4.9e-63 245.7 227 55.5
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 3.2e-62 243.0 223 56.5
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 1.9e-59 233.8 176 63.1
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 1.6e-58 230.7 324 39.2
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 6.3e-58 228.8 176 61.9
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 1.1e-57 228.0 169 65.1
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 1.8e-57 227.3 157 70.7
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 1.8e-49 200.7 144 64.6
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 4.2e-46 189.5 144 64.6
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 5.5e-46 189.1 287 34.5
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 1.4e-44 184.5 157 61.8
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 3.9e-36 156.4 180 49.4
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 6.7e-36 155.6 121 60.3
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 3.7e-34 149.8 110 69.1
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 8.2e-34 148.7 99 72.7
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 2.4e-33 147.1 98 71.4
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 5.3e-33 146.0 121 58.7
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 5.3e-33 146.0 98 70.4
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 1.2e-32 144.8 202 40.1
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 1.6e-32 144.4 98 69.4
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 1.6e-32 144.4 98 69.4
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 1.7e-31 141.0 118 58.5
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 3.6e-29 133.3 295 28.8
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 6.7e-28 129.0 171 39.2
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 1.2e-27 128.3 339 27.1
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 2.6e-27 127.1 99 55.6
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 4.8e-26 122.9 164 37.8
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 1.1e-25 121.7 84 69.0
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 1.1e-25 121.7 84 69.0
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.6e-24 117.9 177 37.9
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 2.5e-22 110.5 134 46.3
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 8.0e-21 105.5 120 50.0
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.8e-20 104.4 170 39.4
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 1.3e-18 98.2 113 42.5
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 5.9e-16 89.4 124 46.0
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.9e-15 87.0 47 93.6
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 2.9e-15 87.0 99 46.5
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 2.3e-12 77.4 43 83.7
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 9.8e-11 72.0 57 57.9
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 1.2e-08 65.1 58 60.3
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 8.6e-07 58.9 134 32.8


User provided reference genes

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