Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 4.6e-180 634.4 315 100.0
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 6.3e-145 517.7 283 92.6
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 3.7e-105 385.6 231 83.5
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 6.0e-87 325.1 249 63.9
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 1.5e-85 320.5 252 63.5
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 4.3e-85 318.9 227 69.6
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.8e-84 316.2 233 67.4
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 1.1e-83 314.3 213 70.4
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 4.0e-83 312.4 258 62.8
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 5.2e-83 312.0 250 62.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 9.9e-82 307.8 202 72.3
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.3e-81 307.4 212 67.9
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 3.8e-81 305.8 228 64.5
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.4e-80 303.9 204 71.6
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 1.9e-80 303.5 258 60.5
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 2.4e-80 303.1 202 72.3
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.4e-80 303.1 233 63.9
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 4.1e-80 302.4 217 67.7
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 5.4e-80 302.0 284 56.3
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 5.4e-80 302.0 233 62.7
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 7.1e-80 301.6 210 66.2
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.6e-79 300.4 226 65.5
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 3.5e-79 299.3 218 67.9
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 4.6e-79 298.9 202 70.8
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 3.9e-78 295.8 227 63.0
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 5.1e-78 295.4 212 67.9
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 8.7e-78 294.7 254 59.1
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 8.7e-78 294.7 256 57.8
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.1e-77 294.3 205 69.3
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.9e-77 293.5 246 59.8
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.9e-77 293.5 246 59.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 3.3e-77 292.7 231 61.5
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 4.3e-77 292.4 230 61.7
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 5.6e-77 292.0 202 66.8
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 9.6e-77 291.2 225 63.6
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.1e-76 290.0 217 64.5
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 2.8e-76 289.7 216 66.2
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 2.8e-76 289.7 267 56.9
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 2.8e-76 289.7 266 56.4
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 4.7e-76 288.9 203 69.5
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 4.7e-76 288.9 231 64.1
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 6.2e-76 288.5 222 63.5
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 1.4e-75 287.3 212 63.7
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.1e-75 286.2 242 60.7
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 4.0e-75 285.8 199 68.8
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 5.2e-75 285.4 236 63.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 5.2e-75 285.4 252 58.3
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 5.2e-75 285.4 233 63.9
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 5.2e-75 285.4 243 57.6
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 9.0e-75 284.6 208 64.9
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 1.2e-74 284.3 216 63.0
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.5e-74 283.9 264 55.3
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 3.4e-74 282.7 190 69.5
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 5.8e-74 282.0 207 65.7
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 5.8e-74 282.0 219 62.6
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 7.6e-74 281.6 226 60.2
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 9.9e-74 281.2 199 66.3
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 9.9e-74 281.2 245 59.2
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 2.2e-73 280.0 190 68.9
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 2.2e-73 280.0 229 59.8
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.4e-72 277.3 184 69.6
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.4e-72 277.3 196 67.3
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 5.4e-72 275.4 205 64.4
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 5.4e-72 275.4 190 67.9
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.6e-71 273.9 251 56.6
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 9.6e-69 264.6 281 53.7
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 4.8e-68 262.3 261 54.4
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 4.0e-67 259.2 194 66.0
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.4e-64 250.8 180 68.3
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 5.4e-64 248.8 241 54.8
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.8e-62 243.8 198 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 2.5e-61 240.0 197 58.4
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 3.3e-61 239.6 204 54.4
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.3e-60 237.7 198 59.1
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 7.1e-56 221.9 156 67.3
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.2e-55 221.1 229 48.9
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 1.0e-54 218.0 212 53.3
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 3.9e-54 216.1 196 53.6
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.6e-52 210.7 194 55.7
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 5.8e-50 202.2 196 55.6
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 1.9e-48 197.2 126 71.4
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.0e-42 177.2 134 64.9
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.7e-41 174.1 231 42.9
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 1.9e-40 170.6 242 42.6
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 9.4e-40 168.3 122 67.2
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 3.0e-38 163.3 95 73.7
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 6.5e-33 145.6 173 48.0
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.1e-27 126.3 80 73.8
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 1.0e-25 121.7 212 37.3
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 1.9e-24 117.5 102 58.8
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.5e-24 117.1 113 54.9
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 3.0e-22 110.2 128 50.0
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 8.8e-22 108.6 93 59.1
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.4e-11 73.9 63 58.7
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 5.0e-09 66.2 84 40.5


User provided reference genes

Program Settings