Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.9e-214 748.8 366 100.0
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 1.4e-204 716.1 366 95.1
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.7e-200 701.8 346 98.6
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 8.0e-192 673.7 370 89.5
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.2e-185 651.4 367 87.5
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.0e-183 646.7 367 85.6
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.5e-182 640.6 382 83.8
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.2e-181 639.0 371 83.8
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 4.8e-181 637.9 371 83.8
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.1e-180 636.7 371 83.6
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 4.1e-180 634.8 365 84.9
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 5.4e-180 634.4 370 84.3
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 5.9e-179 630.9 369 84.6
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 1.0e-178 630.2 369 83.2
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.2e-178 629.0 369 83.7
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 2.9e-178 628.6 369 82.9
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.5e-177 626.3 371 83.0
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.5e-177 626.3 366 83.9
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.9e-177 625.9 369 82.7
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 5.5e-177 624.4 368 83.4
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 1.2e-176 623.2 368 83.4
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 2.1e-176 622.5 371 83.6
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.7e-176 622.1 369 83.5
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 3.6e-176 621.7 369 82.7
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 3.6e-176 621.7 373 83.4
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 6.1e-176 620.9 372 81.5
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.0e-175 620.2 372 80.6
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.0e-175 620.2 371 81.9
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.4e-175 619.8 369 82.1
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.8e-175 619.4 372 81.5
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 2.3e-175 619.0 369 83.2
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 3.0e-175 618.6 369 83.2
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 4.0e-175 618.2 371 83.3
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 6.8e-175 617.5 371 82.7
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 6.8e-175 617.5 371 82.7
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 6.8e-175 617.5 369 82.4
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 8.8e-175 617.1 369 82.4
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 1.2e-174 616.7 369 81.8
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 2.0e-174 615.9 370 81.6
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 3.4e-174 615.1 369 81.8
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.4e-174 614.8 369 82.4
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 7.5e-174 614.0 370 81.9
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 9.8e-174 613.6 370 81.4
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 9.8e-174 613.6 371 81.7
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.3e-173 613.2 369 82.1
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.3e-173 613.2 369 81.3
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.7e-173 612.8 367 80.9
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.8e-173 612.1 371 82.2
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.8e-173 612.1 369 81.8
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 3.7e-173 611.7 377 82.0
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 4.9e-173 611.3 369 80.2
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 4.9e-173 611.3 369 81.8
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 6.3e-173 610.9 372 80.6
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 8.3e-173 610.5 371 81.7
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 1.4e-172 609.8 369 80.5
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.8e-172 609.4 370 81.4
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.4e-172 609.0 366 82.5
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 2.4e-172 609.0 372 79.6
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 5.4e-172 607.8 373 81.0
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 9.1e-172 607.1 368 80.7
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 4.5e-171 604.7 364 81.6
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 4.5e-171 604.7 369 81.0
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 5.9e-171 604.4 371 80.9
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 7.7e-171 604.0 408 75.0
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.7e-171 604.0 371 80.6
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 7.7e-171 604.0 371 80.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 1.0e-170 603.6 369 80.8
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.3e-170 603.2 369 79.9
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.3e-170 603.2 369 79.7
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.3e-170 603.2 369 79.7
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.7e-170 602.8 388 78.4
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.7e-170 602.8 369 78.6
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 2.3e-170 602.4 369 79.4
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 5.0e-170 601.3 367 80.7
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.6e-170 600.9 371 80.3
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 8.6e-170 600.5 372 79.6
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 8.6e-170 600.5 398 76.1
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.1e-169 600.1 369 78.9
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 2.5e-169 599.0 370 78.6
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 5.6e-169 597.8 369 78.6
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 9.5e-169 597.0 369 79.7
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 1.2e-168 596.7 362 80.9
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 3.6e-168 595.1 361 80.9
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 4.7e-168 594.7 368 79.3
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 4.7e-168 594.7 368 79.3
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.7e-168 594.7 371 79.0
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 6.1e-168 594.3 362 81.2
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.4e-167 593.2 362 80.9
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.4e-167 593.2 371 78.2
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 1.8e-167 592.8 368 79.1
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.8e-167 592.8 369 78.3
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.3e-167 592.4 369 77.8
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 4.0e-167 591.7 368 78.5
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 8.9e-167 590.5 368 78.3
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.2e-166 590.1 354 81.9
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 1.2e-166 590.1 362 79.0
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.6e-166 589.0 369 79.4
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 1.7e-165 586.3 368 77.7
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 2.2e-165 585.9 365 78.4
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 2.2e-165 585.9 355 80.3
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.7e-165 585.1 358 80.2
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 4.9e-165 584.7 432 69.9
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 6.4e-165 584.3 369 78.9
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.1e-164 583.6 359 79.7
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.8e-164 582.8 369 78.6
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.6e-163 579.7 359 79.1
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.6e-163 579.7 359 79.1
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.6e-163 579.7 359 79.1
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.6e-163 579.7 359 79.1
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.6e-163 579.7 359 79.1
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 2.0e-163 579.3 357 80.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 3.5e-163 578.6 359 80.5
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 5.9e-163 577.8 351 81.8
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 5.9e-163 577.8 369 78.3
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 7.8e-163 577.4 373 78.6
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.3e-162 576.6 399 72.9
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 7.3e-161 570.9 365 78.9
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 9.5e-161 570.5 371 75.2
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.6e-160 569.7 371 77.1
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 2.1e-160 569.3 371 75.2
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 2.8e-160 568.9 369 76.7
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.7e-160 568.2 371 76.5
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 6.2e-160 567.8 371 77.9
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 2.3e-159 565.8 370 76.5
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 7.5e-158 560.8 369 75.9
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.7e-157 559.7 357 76.5
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 9.2e-156 553.9 352 78.7
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.0e-155 552.7 350 78.9
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 2.7e-155 552.4 359 75.5
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.9e-154 548.5 363 73.6
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 5.0e-154 548.1 365 72.9
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 1.2e-152 543.5 364 72.3
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 3.6e-152 542.0 358 75.1
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 2.3e-151 539.3 374 73.0
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.4e-149 531.2 360 72.5
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.3e-146 522.7 366 70.5
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 2.0e-142 509.6 362 68.5
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 2.9e-141 505.8 395 67.6
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.9e-140 503.1 368 64.9
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 3.2e-140 502.3 369 66.1
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 4.1e-140 501.9 283 84.8
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 5.4e-140 501.5 369 64.2
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 7.1e-140 501.1 368 64.9
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.0e-138 497.3 369 64.8
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 1.4e-135 486.9 370 64.1
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 2.4e-135 486.1 373 64.6
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 5.4e-132 474.9 370 64.9
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 1.6e-131 473.4 353 67.1
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.6e-131 471.9 324 73.1
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 6.0e-131 471.5 325 72.3
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.5e-129 466.1 278 81.3
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.6e-128 463.4 277 80.9
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 3.6e-128 462.2 365 62.2
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.8e-128 461.8 284 80.3
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 2.4e-127 459.5 276 80.8
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.1e-127 459.1 277 79.4
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 3.2e-124 449.1 345 68.7
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 3.3e-121 439.1 274 78.1
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 4.9e-117 425.2 385 55.3
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.9e-114 415.6 271 72.3
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 7.4e-113 411.4 366 54.4
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 9.6e-113 411.0 240 83.8
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 8.1e-112 407.9 272 74.6
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 2.2e-109 399.8 400 51.5
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.9e-108 396.7 276 69.9
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.6e-107 392.1 372 53.8
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.4e-87 327.4 195 79.5
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 3.1e-87 326.2 271 62.7
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.9e-87 325.1 197 80.7
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.0e-86 323.6 198 80.3
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.7e-80 303.9 180 82.8
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 2.3e-66 256.9 170 75.9
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 1.8e-58 230.7 261 51.3
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 9.2e-47 191.8 372 30.6
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 2.8e-43 180.3 440 28.2
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 8.9e-42 175.3 120 70.0
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 7.5e-41 172.2 148 61.5
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 2.2e-40 170.6 120 68.3
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 9.2e-39 165.2 113 74.3
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 7.8e-38 162.2 403 26.6
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 3.9e-37 159.8 115 67.0
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 4.1e-31 139.8 301 30.6
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.1e-28 131.7 84 75.0
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 3.4e-09 67.0 67 55.2
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 3.8e-08 63.5 46 69.6


User provided reference genes

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