Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003964g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-56 222.6 104 100.0
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.2e-21 105.1 74 63.5
Nitab4.5_0004384g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.9e-20 100.5 75 64.0
Nitab4.5_0003921g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-19 99.4 88 54.5
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-16 90.1 174 34.5
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-16 89.4 155 33.5
Nitab4.5_0010487g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.8e-14 81.6 46 76.1
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-12 75.5 69 46.4
PGSC0003DMG400003817 Solanum tuberosum HOM05D000024 ORTHO05D000006 2.7e-12 75.5 73 43.8
Nitab4.5_0001783g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-12 75.1 106 41.5
Nitab4.5_0006711g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.9e-12 73.9 85 41.2
Nitab4.5_0000697g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.8e-11 72.8 58 53.4
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-11 72.4 67 46.3
PGSC0003DMG400033353 Solanum tuberosum HOM05D000024 ORTHO05D000006 3.9e-11 71.6 82 41.5
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 5.1e-11 71.2 67 46.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 6.7e-11 70.9 67 46.3
Nitab4.5_0000092g0350 Nicotiana tabacum HOM05D000003 ORTHO05D000006 8.8e-11 70.5 106 37.7
Nitab4.5_0002737g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.8e-11 70.5 69 44.9
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 8.8e-11 70.5 67 44.8
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 8.8e-11 70.5 70 41.4
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-10 69.3 69 43.5
Nitab4.5_0002170g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.5e-10 68.9 56 53.6
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-10 68.9 67 43.3
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 2.5e-10 68.9 67 43.3
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-10 68.6 66 48.5
Sopen11g016300 Solanum pennellii HOM05D000024 ORTHO05D000006 4.3e-10 68.2 79 41.8
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-09 66.6 52 50.0
Nitab4.5_0000912g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.7e-09 66.2 55 43.6
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 1.7e-09 66.2 70 40.0
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-09 65.9 67 43.3
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-09 65.5 69 42.0
Nitab4.5_0000841g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000022 4.8e-09 64.7 78 41.0
Nitab4.5_0005334g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.8e-09 64.7 55 47.3
Sopen11g013960 Solanum pennellii HOM05D000003 ORTHO05D000006 4.8e-09 64.7 52 50.0
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 6.3e-09 64.3 67 41.8
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 6.3e-09 64.3 74 41.9
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 8.2e-09 63.9 69 39.1
CAN.G421.3 Capsicum annuum HOM05D000024 ORTHO05D000006 1.1e-08 63.5 73 35.6
Nitab4.5_0000102g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-08 63.5 47 55.3
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-08 63.5 65 44.6
Sopen11g007970 Solanum pennellii HOM05D000014 ORTHO05D000016 1.1e-08 63.5 91 39.6
Nitab4.5_0000355g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-08 63.2 53 56.6
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 1.8e-08 62.8 52 48.1
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 1.8e-08 62.8 74 41.9
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-08 62.4 74 40.5
Nitab4.5_0000058g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.1e-08 61.6 37 67.6
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 4.1e-08 61.6 69 42.0
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.3e-08 61.2 47 57.4
Nitab4.5_0008471g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.3e-08 61.2 100 35.0
TAR252G0002 Trochodendron aralioides HOM05D000024 ORTHO05D000006 5.3e-08 61.2 70 37.1
SHI34367 Sapria himalayana HOM05D000024 ORTHO05D000006 6.9e-08 60.8 72 37.5
Sopen09g018560 Solanum pennellii HOM05D008966 ORTHO05D023159 6.9e-08 60.8 69 39.1
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-07 60.1 90 35.6
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.1 77 35.1
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-07 60.1 93 31.2
Sopen09g015050 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-07 60.1 68 38.2
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-07 59.7 70 40.0
Sopen00g005730 Solanum pennellii HOM05D000024 ORTHO05D000006 2.0e-07 59.3 55 43.6
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 2.6e-07 58.9 59 45.8
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 2.6e-07 58.9 69 37.7
SHI51427 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-07 58.2 112 31.2
MBI10_g38924_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.9e-07 57.8 70 32.9
SHI20577 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-07 57.8 73 37.0
SHI47514 Sapria himalayana HOM05D000024 ORTHO05D000006 7.7e-07 57.4 70 37.1
Sopen11g008090 Solanum pennellii HOM05D000024 ORTHO05D000006 7.7e-07 57.4 69 39.1
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 7.7e-07 57.4 145 29.0
SHI06591 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-06 57.0 72 36.1
SHI29828 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-06 57.0 74 37.8
SHI45429 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-06 57.0 88 33.0
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-06 57.0 70 41.4
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 1.3e-06 56.6 52 46.2
MBI01_g02769_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 1.7e-06 56.2 70 37.1
SHI45612 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 56.2 69 39.1
Sopen05g020300 Solanum pennellii HOM05D000003 ORTHO05D000006 1.7e-06 56.2 67 41.8
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 1.7e-06 56.2 57 38.6
Aqoxy5G03271 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 2.2e-06 55.8 74 33.8
Aqoxy7G02362 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-06 55.8 76 39.5
MBI15_g34613_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 2.2e-06 55.8 73 35.6
Nitab4.5_0000357g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-06 55.8 70 40.0
SHI24671 Sapria himalayana HOM05D000024 ORTHO05D000006 2.2e-06 55.8 72 34.7
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 2.2e-06 55.8 52 46.2
Aqoxy3G02373 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 2.9e-06 55.5 73 32.9
SHI23647 Sapria himalayana HOM05D000024 ORTHO05D000006 2.9e-06 55.5 72 34.7
SHI32017 Sapria himalayana HOM05D000024 ORTHO05D000007 2.9e-06 55.5 72 37.5
SHI37126 Sapria himalayana HOM05D000024 ORTHO05D000006 2.9e-06 55.5 74 35.1
SHI21591 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI33707 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI36703 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI36727 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 74 35.1
SHI38265 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 36.1
SHI39928 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI42169 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI43692 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI47482 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI48948 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 72 34.7
SHI49832 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-06 55.1 102 32.4
Sed0013654 Sechium edule HOM05D000003 ORTHO05D000126 3.8e-06 55.1 71 38.0
MBI15_g18587_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.0e-06 54.7 70 35.7
Nitab4.5_0006567g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.0e-06 54.7 69 34.8
SHI01495 Sapria himalayana HOM05D000024 ORTHO05D000006 5.0e-06 54.7 72 37.5
SHI35408 Sapria himalayana HOM05D000024 ORTHO05D000007 5.0e-06 54.7 71 35.2
SHI35439 Sapria himalayana HOM05D000024 ORTHO05D000006 5.0e-06 54.7 74 33.8
SHI45455 Sapria himalayana HOM05D000024 ORTHO05D000006 5.0e-06 54.7 73 35.6
SHI49303 Sapria himalayana HOM05D000024 ORTHO05D000006 5.0e-06 54.7 72 34.7
Aqoxy7G02980 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 6.5e-06 54.3 69 34.8
Nitab4.5_0000508g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.5e-06 54.3 55 40.0
Nitab4.5_0001444g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.5e-06 54.3 47 44.7
SHI28583 Sapria himalayana HOM05D000024 ORTHO05D000006 6.5e-06 54.3 72 34.7
SHI37506 Sapria himalayana HOM05D000024 ORTHO05D000006 6.5e-06 54.3 72 34.7
MSTRG.26849 Avicennia marina HOM05D000024 ORTHO05D000006 8.5e-06 53.9 85 35.3
SHI14065 Sapria himalayana HOM05D000024 ORTHO05D000006 8.5e-06 53.9 72 34.7
SHI19694 Sapria himalayana HOM05D000024 ORTHO05D000006 8.5e-06 53.9 70 35.7
SHI40642 Sapria himalayana HOM05D000024 ORTHO05D000006 8.5e-06 53.9 72 36.1
SHI42357 Sapria himalayana HOM05D000024 ORTHO05D000006 8.5e-06 53.9 106 31.1
SHI49069 Sapria himalayana HOM05D000024 ORTHO05D000006 8.5e-06 53.9 73 34.2


User provided reference genes

Program Settings