Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003952g0100 Nicotiana tabacum HOM05D000162 ORTHO05D000090 4.0e-63 244.6 123 100.0
Nitab4.5_0002641g0070 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.2e-45 185.7 120 81.7
PGSC0003DMG400009683 Solanum tuberosum HOM05D000162 ORTHO05D000090 9.0e-23 110.5 146 47.9
CAN.G1767.2 Capsicum annuum HOM05D001929 ORTHO05D000090 7.6e-22 107.5 153 45.1
Nitab4.5_0000556g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 6.5e-21 104.4 157 43.9
Nitab4.5_0003952g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.5e-21 104.0 142 45.8
Nitab4.5_0000956g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.2e-20 100.9 143 42.7
Nitab4.5_0000295g0190 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.2e-19 100.1 146 43.2
Nitab4.5_0003952g0040 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.1e-19 99.4 136 45.6
Nitab4.5_0000428g0430 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.7e-19 99.0 142 42.3
PGSC0003DMG400003403 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.7e-19 99.0 142 45.1
CAN.G1767.1 Capsicum annuum HOM05D000162 ORTHO05D000090 3.6e-19 98.6 142 44.4
CAN.G869.9 Capsicum annuum HOM05D000162 ORTHO05D000090 7.9e-19 97.4 142 44.4
Nitab4.5_0007991g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.0e-18 97.1 142 41.5
PGSC0003DMG400020643 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.4e-18 96.7 152 41.4
Nitab4.5_0010978g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.3e-18 95.9 152 42.8
CAN.G1768.10 Capsicum annuum HOM05D000162 ORTHO05D000090 6.7e-18 94.4 153 42.5
PGSC0003DMG400020644 Solanum tuberosum HOM05D000162 ORTHO05D000090 8.8e-18 94.0 155 41.9
Nitab4.5_0009617g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.9e-17 92.8 144 40.3
CAN.G241.21 Capsicum annuum HOM05D000162 ORTHO05D000090 2.5e-17 92.4 142 43.0
Nitab4.5_0001998g0170 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.5e-17 92.4 142 41.5
Solyc06g007740.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 2.5e-17 92.4 152 40.8
PGSC0003DMG400022036 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.5e-17 92.4 142 41.5
Nitab4.5_0003952g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.3e-17 92.0 142 41.5
Solyc06g007300.2 Solanum lycopersicum HOM05D000162 ORTHO05D000090 3.3e-17 92.0 152 40.8
Sopen06g002700 Solanum pennellii HOM05D000162 ORTHO05D000090 3.3e-17 92.0 142 43.7
PGSC0003DMG400020776 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.3e-17 92.0 117 47.0
Nitab4.5_0008316g0040 Nicotiana tabacum HOM05D000162 ORTHO05D000090 4.3e-17 91.7 117 47.0
Nitab4.5_0002932g0070 Nicotiana tabacum HOM05D000162 ORTHO05D000090 5.7e-17 91.3 142 39.4
PGSC0003DMG400020555 Solanum tuberosum HOM05D000162 ORTHO05D000090 5.7e-17 91.3 160 39.4
Nitab4.5_0000428g0280 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.4e-17 90.9 119 43.7
Nitab4.5_0003952g0060 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.4e-17 90.9 117 46.2
Nitab4.5_0010755g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.4e-17 90.9 144 39.6
Nitab4.5_0000428g0340 Nicotiana tabacum HOM05D000162 ORTHO05D000090 9.7e-17 90.5 141 39.7
Sopen06g002220 Solanum pennellii HOM05D000162 ORTHO05D000090 9.7e-17 90.5 145 40.7
Peaxi162Scf00538g00035 Petunia axillaris HOM05D000162 ORTHO05D000090 1.7e-16 89.7 112 48.2
Nitab4.5_0012011g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.2e-16 89.4 146 39.7
PGSC0003DMG400003401 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.8e-16 89.0 117 47.9
PGSC0003DMG400022035 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.8e-16 89.0 142 42.3
CAN.G741.40 Capsicum annuum HOM05D000162 ORTHO05D000090 3.7e-16 88.6 147 40.1
Peaxi162Scf00158g00230 Petunia axillaris HOM05D000162 ORTHO05D000090 4.8e-16 88.2 146 37.7
Nitab4.5_0013850g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 6.3e-16 87.8 119 44.5
Peaxi162Scf00345g00051 Petunia axillaris HOM05D000162 ORTHO05D000090 6.3e-16 87.8 120 42.5
Solyc05g009253.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 6.3e-16 87.8 142 41.5
Peaxi162Scf00342g00103 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-15 87.0 146 37.0
Nitab4.5_0003068g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.4e-15 86.7 142 38.7
Nitab4.5_0000157g0390 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.1e-15 85.5 140 39.3
Peaxi162Scf00158g00032 Petunia axillaris HOM05D000162 ORTHO05D000090 6.9e-15 84.3 142 38.0
Peaxi162Scf00158g00022 Petunia axillaris HOM05D000162 ORTHO05D000090 9.1e-15 84.0 138 39.1
Nitab4.5_0006665g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.2e-14 83.6 142 40.1
Nitab4.5_0000157g0280 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.5e-14 83.2 142 38.0
Nitab4.5_0000428g0270 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.0e-14 82.8 139 37.4
Nitab4.5_0003318g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.6e-14 82.4 142 39.4
Peaxi162Scf00273g00105 Petunia axillaris HOM05D000162 ORTHO05D000090 3.4e-14 82.0 142 38.0
Peaxi162Scf00342g00097 Petunia axillaris HOM05D000162 ORTHO05D000090 4.5e-14 81.6 117 41.9
Peaxi162Scf00342g00102 Petunia axillaris HOM05D000162 ORTHO05D000090 4.5e-14 81.6 117 41.9
Sopen06g002690 Solanum pennellii HOM05D000162 ORTHO05D000090 4.5e-14 81.6 90 54.4
Peaxi162Scf01021g00023 Petunia axillaris HOM05D000162 ORTHO05D000090 7.7e-14 80.9 142 35.9
PGSC0003DMG400009682 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.0e-13 80.5 80 56.2
Peaxi162Scf00342g00929 Petunia axillaris HOM05D000162 ORTHO05D000090 1.3e-13 80.1 117 41.0
PGSC0003DMG400009687 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.3e-13 80.1 99 50.5
Peaxi162Scf00342g00124 Petunia axillaris HOM05D000162 ORTHO05D000090 1.7e-13 79.7 117 40.2
Peaxi162Scf00342g00111 Petunia axillaris HOM05D000162 ORTHO05D000090 2.2e-13 79.3 119 40.3
Peaxi162Scf00342g00122 Petunia axillaris HOM05D000162 ORTHO05D000090 2.2e-13 79.3 119 39.5
Peaxi162Scf00342g01331 Petunia axillaris HOM05D000162 ORTHO05D000090 2.9e-13 79.0 130 39.2
Peaxi162Scf00345g00041 Petunia axillaris HOM05D000162 ORTHO05D000090 2.9e-13 79.0 130 39.2
Peaxi162Scf00158g00313 Petunia axillaris HOM05D000162 ORTHO05D000090 3.8e-13 78.6 131 38.9
Peaxi162Scf00273g00104 Petunia axillaris HOM05D000162 ORTHO05D000090 3.8e-13 78.6 142 35.9
Peaxi162Scf01053g00033 Petunia axillaris HOM05D000162 ORTHO05D000090 3.8e-13 78.6 136 38.2
Peaxi162Scf00129g00156 Petunia axillaris HOM05D000162 ORTHO05D000090 5.0e-13 78.2 142 37.3
Peaxi162Scf00538g00042 Petunia axillaris HOM05D000162 ORTHO05D000090 5.0e-13 78.2 115 41.7
Peaxi162Scf00677g00039 Petunia axillaris HOM05D000162 ORTHO05D000090 6.5e-13 77.8 139 36.0
Peaxi162Scf00689g00424 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-12 77.0 142 34.5
Nitab4.5_0002641g0030 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.9e-12 76.3 99 46.5
Peaxi162Scf00129g01670 Petunia axillaris HOM05D000162 ORTHO05D000090 1.9e-12 76.3 137 40.1
Peaxi162Scf00129g01612 Petunia axillaris HOM05D000162 ORTHO05D000090 2.5e-12 75.9 142 35.9
Nitab4.5_0010755g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.2e-12 75.5 129 39.5
CAN.G741.27 Capsicum annuum HOM05D000162 ORTHO05D000090 9.4e-12 73.9 105 45.7
Nitab4.5_0000428g0260 Nicotiana tabacum HOM05D000162 ORTHO05D000090 9.4e-12 73.9 132 38.6
Peaxi162Scf00129g01534 Petunia axillaris HOM05D000162 ORTHO05D000090 9.4e-12 73.9 155 36.8
Peaxi162Scf00158g00041 Petunia axillaris HOM05D000162 ORTHO05D000090 9.4e-12 73.9 131 38.9
Peaxi162Scf00342g01012 Petunia axillaris HOM05D000162 ORTHO05D000090 9.4e-12 73.9 142 35.9
Peaxi162Scf00154g00210 Petunia axillaris HOM05D000162 ORTHO05D000090 1.2e-11 73.6 144 32.6
Peaxi162Scf00154g00044 Petunia axillaris HOM05D000162 ORTHO05D000090 2.1e-11 72.8 145 33.8
Peaxi162Scf00524g00101 Petunia axillaris HOM05D000162 ORTHO05D000090 2.1e-11 72.8 125 36.8
CAN.G1440.4 Capsicum annuum HOM05D000011 ORTHO05D001721 3.6e-11 72.0 137 40.1
Peaxi162Scf00129g00153 Petunia axillaris HOM05D000162 ORTHO05D000090 3.6e-11 72.0 142 34.5
Peaxi162Scf00154g00035 Petunia axillaris HOM05D000162 ORTHO05D000090 4.7e-11 71.6 144 32.6
Peaxi162Scf01475g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 1.8e-10 69.7 142 35.2
Solyc04g080120.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.8e-10 69.7 149 34.9
Nitab4.5_0002468g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.0e-10 68.9 164 32.9
Peaxi162Scf00342g01215 Petunia axillaris HOM05D000162 ORTHO05D000090 3.0e-10 68.9 128 35.9
Sopen04g033700 Solanum pennellii HOM05D000162 ORTHO05D000090 5.1e-10 68.2 130 34.6
ECA238G1168 Erigeron canadensis HOM05D000162 ORTHO05D000090 6.7e-10 67.8 153 30.1
CAN.G1126.37 Capsicum annuum HOM05D000162 ORTHO05D000090 8.8e-10 67.4 131 35.9
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 1.5e-09 66.6 137 32.8
PGSC0003DMG401005966 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.5e-09 66.6 149 35.6
PGSC0003DMG402005966 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.5e-09 66.6 149 35.6
HanXRQChr07g0203521 Helianthus annuus HOM05D000162 ORTHO05D000090 2.0e-09 66.2 145 31.0
HanXRQChr10g0284831 Helianthus annuus HOM05D000162 ORTHO05D000090 2.0e-09 66.2 145 29.0
Nitab4.5_0007124g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.0e-09 66.2 116 36.2
CAN.G241.2 Capsicum annuum HOM05D000162 ORTHO05D000090 2.6e-09 65.9 102 43.1
ECA232G1497 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.6e-09 65.9 145 32.4
Peaxi162Scf00154g00039 Petunia axillaris HOM05D000162 ORTHO05D000090 2.6e-09 65.9 144 31.2
Peaxi162Scf00154g00321 Petunia axillaris HOM05D000162 ORTHO05D000090 2.6e-09 65.9 142 31.0
CAN.G1440.7 Capsicum annuum HOM05D000162 ORTHO05D000090 3.3e-09 65.5 99 41.4
HanXRQChr07g0203991 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-09 65.5 145 29.0
HanXRQChr07g0204091 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-09 65.5 145 30.3
Nitab4.5_0000428g0330 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.3e-09 65.5 142 32.4
MSTRG.11881 Avicennia marina HOM05D000162 ORTHO05D000090 4.4e-09 65.1 159 30.2
Peaxi162Scf00154g00046 Petunia axillaris HOM05D000162 ORTHO05D000090 9.7e-09 63.9 115 32.2
HanXRQChr07g0204941 Helianthus annuus HOM05D000162 ORTHO05D000090 1.3e-08 63.5 143 28.7
Hma1.2p1_2917F.1_g330320 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.3e-08 63.5 143 29.4
Peaxi162Scf00154g00034 Petunia axillaris HOM05D000162 ORTHO05D000090 1.3e-08 63.5 142 30.3
PGSC0003DMG400020556 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.3e-08 63.5 96 41.7
HanXRQChr07g0204971 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-08 63.2 145 27.6
Actinidia04470 Actinidia chinensis HOM05D000162 ORTHO05D000090 3.7e-08 62.0 106 36.8
Solyc06g007820.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 3.7e-08 62.0 39 71.8
Peaxi162Scf00342g01330 Petunia axillaris HOM05D000162 ORTHO05D000090 4.8e-08 61.6 100 39.0
SalBow7G2569 Salvia bowleyana HOM05D000162 ORTHO05D000090 4.8e-08 61.6 153 27.5
SalBow3G1814 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.2e-08 60.8 152 29.6
ECA232G1819 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.4e-07 60.1 145 28.3
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.4e-07 60.1 107 34.6
CAN.G48.1 Capsicum annuum HOM05D000162 ORTHO05D000090 1.8e-07 59.7 99 38.4
Hma1.2p1_1076F.1_g254530 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.8e-07 59.7 147 29.3
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.8e-07 59.7 144 31.2
Sopen06g002620 Solanum pennellii HOM05D000162 ORTHO05D000090 2.4e-07 59.3 39 66.7
CSS0041306 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 3.1e-07 58.9 144 30.6
Migut.G01164 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.1e-07 58.9 138 30.4
HanXRQChr07g0204981 Helianthus annuus HOM05D000162 ORTHO05D000090 3.1e-07 58.9 145 27.6
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.1e-07 58.9 144 29.2
Hma1.2p1_1798F.1_g302880 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.1e-07 58.5 144 29.9
Migut.G01184 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.3e-07 58.2 137 30.7
Peaxi162Scf00154g00326 Petunia axillaris HOM05D000162 ORTHO05D000090 5.3e-07 58.2 143 30.1
Hma1.2p1_0310F.1_g120980 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 7.0e-07 57.8 114 33.3
Sopen06g001200 Solanum pennellii HOM05D000162 ORTHO05D003288 7.0e-07 57.8 40 65.0
Peaxi162Scf00342g00934 Petunia axillaris HOM05D000162 ORTHO05D000090 9.1e-07 57.4 82 40.2
HanXRQChr14g0435461 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-06 57.0 145 28.3
Solyc06g005220.2 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.2e-06 57.0 40 65.0
Migut.G01173 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.5e-06 56.6 138 31.2
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.5e-06 56.6 144 29.9
MSTRG.9116 Avicennia marina HOM05D000162 ORTHO05D000090 2.0e-06 56.2 137 30.7
HanXRQChr11g0341941 Helianthus annuus HOM05D000162 ORTHO05D000090 2.0e-06 56.2 145 26.9
Nitab4.5_0001594g0060 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.0e-06 56.2 57 56.1
vmacro15514 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.0e-06 56.2 172 27.3
Gohir.D10G136600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 2.6e-06 55.8 84 32.1
vmacro15513 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.6e-06 55.8 145 29.0
ECA232G4999 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.4e-06 55.5 127 31.5
ECA238G3715 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.4e-06 55.5 136 31.6
Migut.J01191 Erythranthe guttata HOM05D000162 ORTHO05D000090 3.4e-06 55.5 118 31.4
HanXRQChr14g0435491 Helianthus annuus HOM05D000162 ORTHO05D000090 3.4e-06 55.5 145 28.3
Gorai.011G151500 Gossypium raimondii HOM05D000162 ORTHO05D000090 4.5e-06 55.1 84 32.1
Cc00_g03850 Coffea canephora HOM05D000162 ORTHO05D000090 5.9e-06 54.7 145 27.6
Hma1.2p1_1076F.1_g254520 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 5.9e-06 54.7 150 28.0
Peaxi162Scf00342g00125 Petunia axillaris HOM05D000162 ORTHO05D000090 5.9e-06 54.7 85 40.0
Sopen06g002610 Solanum pennellii HOM05D000162 ORTHO05D000090 5.9e-06 54.7 64 50.0
Cc07_g18960 Coffea canephora HOM05D000162 ORTHO05D000090 7.7e-06 54.3 146 27.4
Migut.G01188 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.7e-06 54.3 151 26.5
Nitab4.5_0005212g0060 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.7e-06 54.3 39 61.5


User provided reference genes

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