Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.3e-121 437.2 214 100.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.2e-85 319.3 204 81.4
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.8e-80 302.4 185 83.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.4e-79 300.1 239 70.3
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.7e-64 250.0 139 89.9
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.7e-64 250.0 142 87.3
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 6.3e-64 248.1 139 89.2
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 1.1e-60 237.3 139 84.2
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 1.5e-60 236.9 139 84.2
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 4.7e-59 231.9 139 83.5
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 6.1e-59 231.5 139 82.7
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 6.1e-59 231.5 139 82.7
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.4e-58 230.3 139 82.7
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.4e-58 230.3 139 82.7
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.8e-58 229.9 136 84.6
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 1.8e-58 229.9 139 82.0
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 3.4e-57 225.7 142 81.0
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 7.5e-57 224.6 142 81.7
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.7e-56 223.4 139 79.9
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 6.3e-56 221.5 211 61.6
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.6e-54 216.9 139 79.9
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 4.5e-54 215.3 139 77.7
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.3e-53 213.8 142 76.8
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.7e-53 213.4 139 77.7
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 6.5e-53 211.5 119 89.1
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 4.2e-52 208.8 141 78.0
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 3.6e-51 205.7 141 78.0
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 6.1e-51 204.9 141 78.0
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 6.1e-51 204.9 141 78.0
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 6.1e-51 204.9 141 78.0
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.4e-50 203.8 141 77.3
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.4e-50 203.8 141 77.3
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 3.0e-50 202.6 141 77.3
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 4.9e-48 195.3 142 75.4
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 4.3e-44 182.2 151 64.2
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 4.3e-44 182.2 151 64.2
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 4.3e-44 182.2 151 64.2
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 4.3e-44 182.2 151 64.2
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 4.3e-44 182.2 151 64.2
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 3.6e-43 179.1 139 70.5
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 6.1e-43 178.3 161 64.0
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 2.6e-41 172.9 117 75.2
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 2.9e-40 169.5 118 72.9
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 2.9e-40 169.5 118 72.9
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.6e-38 163.7 118 71.2
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.0e-37 161.0 139 63.3
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 3.9e-37 159.1 139 61.9
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 6.2e-35 151.8 206 48.1
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.7e-29 133.7 97 68.0
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 1.1e-26 124.4 129 55.8
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.4e-26 124.0 75 82.7
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.5e-20 104.0 58 86.2
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 7.3e-20 101.7 98 60.2
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 9.5e-20 101.3 58 84.5
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 9.2e-15 84.7 96 51.0
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.2e-14 84.3 48 83.3
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 2.7e-14 83.2 96 50.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 1.0e-13 81.3 104 52.9
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.9e-12 77.0 47 80.9
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 3.6e-11 72.8 36 91.7
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 8.1e-11 71.6 41 82.9
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 9.9e-09 64.7 59 66.1
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 7.1e-07 58.5 28 96.4
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 7.1e-07 58.5 53 56.6
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.1e-06 57.0 65 49.2
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 4.6e-06 55.8 36 75.0


User provided reference genes

Program Settings