Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 9.3e-153 543.5 273 100.0
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 1.3e-85 320.5 252 67.9
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 7.0e-84 314.7 256 65.6
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 2.0e-78 296.6 256 66.0
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.0e-78 296.6 256 66.0
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 8.6e-74 281.2 273 57.9
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 8.9e-71 271.2 272 54.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 1.7e-66 256.9 253 54.9
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 5.6e-65 251.9 252 53.6
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 9.5e-65 251.1 253 54.2
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 2.1e-64 250.0 253 53.4
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 6.2e-64 248.4 275 52.4
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.0e-62 243.4 253 52.6
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 4.4e-62 242.3 259 51.7
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 2.2e-61 240.0 253 51.4
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 1.2e-59 234.2 263 48.7
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 6.0e-59 231.9 253 51.0
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 6.6e-58 228.4 281 48.0
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 1.5e-57 227.3 253 51.0
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.5e-57 227.3 257 49.4
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 3.3e-57 226.1 316 44.0
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 4.3e-57 225.7 316 43.0
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 7.3e-57 224.9 266 47.4
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 2.1e-56 223.4 252 49.2
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 2.1e-56 223.4 253 49.8
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 3.6e-56 222.6 255 47.5
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 6.2e-56 221.9 303 43.6
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 2.3e-55 219.9 255 49.4
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 2.3e-55 219.9 253 49.4
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 6.8e-55 218.4 230 53.5
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 6.8e-55 218.4 230 53.5
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 6.8e-55 218.4 231 51.5
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 8.9e-55 218.0 255 48.2
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 1.2e-54 217.6 264 47.7
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 1.5e-54 217.2 231 51.5
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 2.6e-54 216.5 303 43.2
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 3.4e-54 216.1 257 47.9
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 3.4e-54 216.1 310 43.9
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 3.4e-54 216.1 262 48.5
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.3e-53 214.2 253 48.2
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 3.7e-53 212.6 231 51.5
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 8.3e-53 211.5 241 50.2
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 8.3e-53 211.5 257 47.1
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 1.1e-52 211.1 253 48.2
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.1e-52 211.1 248 47.6
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 1.4e-52 210.7 253 47.8
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 1.9e-52 210.3 253 47.8
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 1.9e-52 210.3 257 45.9
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.9e-52 210.3 255 49.8
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.9e-52 210.3 255 50.2
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 2.4e-52 209.9 231 51.5
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 5.4e-52 208.8 335 39.7
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 7.1e-52 208.4 258 47.7
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 9.2e-52 208.0 255 49.8
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 1.6e-51 207.2 245 47.8
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 7.8e-51 204.9 235 49.4
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 1.3e-50 204.1 254 48.8
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 3.9e-50 202.6 233 48.9
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 8.6e-50 201.4 256 47.3
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 3.3e-49 199.5 256 45.7
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 5.6e-49 198.7 255 46.7
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 7.3e-49 198.4 254 48.4
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 1.2e-48 197.6 316 40.5
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 1.6e-48 197.2 310 41.3
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 1.6e-48 197.2 259 44.8
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 2.1e-48 196.8 317 41.0
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 2.8e-48 196.4 263 44.9
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 4.7e-48 195.7 259 44.8
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.2e-48 195.3 259 44.8
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 1.4e-47 194.1 231 46.3
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 1.4e-47 194.1 219 50.7
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.4e-47 194.1 219 50.2
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 1.8e-47 193.7 308 39.9
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 3.1e-47 193.0 254 47.6
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 6.8e-47 191.8 254 46.9
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 1.2e-46 191.0 254 47.6
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 3.4e-46 189.5 229 50.7
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 4.4e-46 189.1 254 47.2
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 9.9e-46 188.0 255 45.1
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 9.9e-46 188.0 315 37.8
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 4.9e-45 185.7 291 41.6
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 8.4e-45 184.9 229 49.8
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 8.4e-45 184.9 229 49.8
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 2.4e-44 183.3 264 45.1
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 5.4e-44 182.2 320 38.8
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 7.1e-44 181.8 257 44.4
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 4.6e-43 179.1 228 46.5
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 1.3e-42 177.6 221 49.3
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.1e-41 174.5 223 48.9
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 3.3e-41 172.9 223 48.4
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 1.6e-40 170.6 223 48.0
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 8.4e-37 158.3 256 39.8
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.3e-34 151.0 271 38.0
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 1.3e-34 151.0 271 38.0
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 1.1e-31 141.4 253 40.3
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 4.0e-31 139.4 260 37.3
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 2.0e-30 137.1 225 40.9
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.7e-29 134.0 202 44.1
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.1e-28 131.3 219 41.1
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 1.1e-25 121.3 169 41.4
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.3e-24 117.9 162 46.9
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 2.4e-23 113.6 132 53.8
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.4e-20 104.4 150 43.3
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 1.8e-18 97.4 56 82.1
Nitab4.5_0000175g0170 Nicotiana tabacum HOM05D003575 ORTHO05D005592 5.1e-18 95.9 56 78.6
Nitab4.5_0005447g0030 Nicotiana tabacum HOM05D003575 ORTHO05D005592 5.1e-18 95.9 54 83.3
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.1e-17 94.7 56 78.6
Nitab4.5_0001180g0050 Nicotiana tabacum HOM05D005979 ORTHO05D007848 1.1e-17 94.7 56 80.4
Nitab4.5_0000167g0270 Nicotiana tabacum HOM05D004901 ORTHO05D005592 2.1e-16 90.5 56 78.6
Nitab4.5_0000416g0040 Nicotiana tabacum HOM05D003575 ORTHO05D005592 6.9e-15 85.5 55 74.5
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.6e-14 83.6 52 78.8
Nitab4.5_0000688g0050 Nicotiana tabacum HOM05D001046 ORTHO05D007174 2.6e-14 83.6 53 79.2
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.7e-13 80.9 195 35.4
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 3.8e-13 79.7 50 82.0
Nitab4.5_0002208g0050 Nicotiana tabacum HOM05D000240 ORTHO05D002608 2.5e-12 77.0 55 69.1
Nitab4.5_0001057g0200 Nicotiana tabacum HOM05D000706 ORTHO05D001554 6.1e-11 72.4 53 64.2
Nitab4.5_0000250g0120 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.6e-08 64.3 42 71.4
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 6.3e-08 62.4 221 28.1


User provided reference genes

Program Settings