Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.2e-58 229.6 113 100.0
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 5.5e-35 151.0 98 80.6
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.2e-32 143.3 70 95.7
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 1.7e-31 139.4 103 65.0
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.7e-31 139.4 70 91.4
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 4.9e-31 137.9 70 91.4
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 1.1e-30 136.7 152 47.4
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 4.1e-30 134.8 70 90.0
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 4.1e-30 134.8 70 90.0
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.2e-29 133.3 70 82.9
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 2.7e-29 132.1 92 67.4
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 5.9e-29 131.0 85 71.8
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 5.9e-29 131.0 70 82.9
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 7.8e-29 130.6 70 78.6
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 1.0e-28 130.2 133 49.6
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 1.3e-28 129.8 70 82.9
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.3e-28 129.8 70 81.4
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 1.3e-28 129.8 70 81.4
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 1.7e-28 129.4 70 81.4
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 1.7e-28 129.4 70 82.9
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 1.7e-28 129.4 94 64.9
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 2.3e-28 129.0 89 70.8
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 3.8e-28 128.3 70 80.0
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 5.0e-28 127.9 70 81.4
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 5.0e-28 127.9 70 81.4
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 6.6e-28 127.5 70 80.0
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 6.6e-28 127.5 94 66.0
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 6.6e-28 127.5 70 80.0
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 6.6e-28 127.5 70 78.6
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 8.6e-28 127.1 70 78.6
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 8.6e-28 127.1 70 80.0
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 8.6e-28 127.1 70 80.0
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 1.1e-27 126.7 70 80.0
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 1.1e-27 126.7 70 78.6
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 1.1e-27 126.7 70 80.0
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 1.1e-27 126.7 70 78.6
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 1.5e-27 126.3 70 81.4
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 5.6e-27 124.4 70 77.1
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 7.3e-27 124.0 70 80.0
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 7.3e-27 124.0 70 80.0
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 7.3e-27 124.0 70 80.0
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 7.3e-27 124.0 70 77.1
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 7.3e-27 124.0 71 76.1
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 9.5e-27 123.6 70 74.3
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 9.5e-27 123.6 70 78.6
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 9.5e-27 123.6 70 75.7
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 1.6e-26 122.9 70 74.3
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 2.1e-26 122.5 70 75.7
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 2.1e-26 122.5 70 74.3
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 2.1e-26 122.5 70 74.3
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 2.1e-26 122.5 70 77.1
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.8e-26 122.1 70 78.6
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 2.8e-26 122.1 70 74.3
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 4.7e-26 121.3 70 74.3
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 4.7e-26 121.3 86 66.3
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 4.7e-26 121.3 70 75.7
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 4.7e-26 121.3 88 64.8
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 4.7e-26 121.3 70 75.7
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 6.1e-26 120.9 70 75.7
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 8.0e-26 120.6 70 74.3
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 8.0e-26 120.6 70 74.3
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 1.0e-25 120.2 70 74.3
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 1.0e-25 120.2 70 74.3
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 1.0e-25 120.2 70 75.7
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 1.8e-25 119.4 70 72.9
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 1.8e-25 119.4 70 71.4
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 2.3e-25 119.0 70 72.9
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 2.3e-25 119.0 70 72.9
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 2.3e-25 119.0 70 72.9
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 2.3e-25 119.0 70 72.9
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 3.0e-25 118.6 70 71.4
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 3.0e-25 118.6 70 70.0
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 4.0e-25 118.2 70 70.0
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 4.0e-25 118.2 70 72.9
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 5.2e-25 117.9 70 72.9
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 5.2e-25 117.9 70 71.4
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 5.2e-25 117.9 70 74.3
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 6.8e-25 117.5 70 71.4
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 6.8e-25 117.5 70 71.4
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 6.8e-25 117.5 70 71.4
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 8.9e-25 117.1 70 74.3
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 2.0e-24 115.9 70 70.0
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 2.6e-24 115.5 70 71.4
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 2.6e-24 115.5 70 68.6
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.6e-24 115.5 70 71.4
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 4.4e-24 114.8 70 68.6
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 4.4e-24 114.8 70 68.6
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 5.7e-24 114.4 88 60.2
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 7.5e-24 114.0 70 70.0
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 9.8e-24 113.6 70 68.6
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 9.8e-24 113.6 70 68.6
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 4.1e-22 108.2 70 68.6
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 4.6e-21 104.8 93 58.1
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.6e-21 104.8 70 67.1
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.6e-21 104.8 70 67.1
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 4.6e-21 104.8 70 67.1
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 4.6e-21 104.8 101 51.5
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 1.1e-19 100.1 70 64.3
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 2.6e-16 89.0 71 56.3
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 1.1e-11 73.6 66 56.1
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.5e-11 72.4 49 69.4
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 3.3e-11 72.0 41 75.6
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 5.6e-11 71.2 41 78.0
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 5.6e-11 71.2 41 78.0
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 8.1e-10 67.4 65 55.4


User provided reference genes

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