Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.2e-245 852.8 462 100.0
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 1.7e-239 832.4 463 98.3
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 9.6e-227 790.0 466 89.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 8.1e-226 786.9 466 90.3
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 3.1e-225 785.0 466 90.1
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 6.9e-225 783.9 466 89.9
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 1.4e-204 716.5 447 84.3
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 1.8e-204 716.1 463 82.9
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 8.8e-204 713.8 465 81.7
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.4e-201 705.7 465 83.2
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.7e-197 692.2 468 78.6
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 4.7e-197 691.4 447 81.4
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 2.0e-195 686.0 465 76.6
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 9.7e-195 683.7 419 84.5
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 9.7e-195 683.7 465 78.9
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 8.2e-194 680.6 464 79.7
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 1.1e-193 680.2 447 78.1
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 1.4e-193 679.9 464 79.1
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 3.1e-193 678.7 466 79.6
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 4.1e-193 678.3 448 81.0
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 1.2e-192 676.8 467 77.7
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 7.7e-192 674.1 465 74.6
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.3e-191 673.3 465 77.8
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 8.5e-191 670.6 481 73.6
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 3.2e-190 668.7 447 77.6
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.4e-188 663.3 465 77.2
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.4e-188 663.3 466 75.8
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.0e-188 662.1 465 74.6
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 4.0e-188 661.8 464 74.1
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 8.8e-188 660.6 465 74.4
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.3e-187 658.7 452 80.3
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 7.5e-187 657.5 447 75.2
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 7.5e-187 657.5 471 77.3
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 3.7e-186 655.2 447 76.3
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 1.1e-185 653.7 465 77.2
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.4e-185 653.3 426 79.1
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 4.1e-185 651.7 466 75.1
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 4.1e-185 651.7 465 77.6
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 7.0e-185 651.0 466 75.5
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 9.1e-185 650.6 466 76.4
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 1.6e-184 649.8 464 71.6
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 2.7e-184 649.0 467 77.9
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 4.5e-184 648.3 465 74.6
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 5.9e-184 647.9 466 73.4
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 7.7e-184 647.5 465 72.5
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 7.7e-184 647.5 426 78.2
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.0e-183 647.1 452 76.5
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.0e-183 647.1 466 75.3
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.7e-183 646.4 465 71.8
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 2.2e-183 646.0 465 72.3
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 6.5e-183 644.4 416 79.1
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 6.5e-183 644.4 447 74.9
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 8.5e-183 644.0 465 71.2
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 8.5e-183 644.0 445 76.9
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 3.6e-181 638.6 465 72.0
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 6.1e-181 637.9 421 77.0
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 6.1e-181 637.9 464 73.1
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 8.0e-181 637.5 447 73.8
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.0e-180 637.1 466 77.0
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.3e-180 636.0 463 72.8
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 5.2e-180 634.8 420 76.9
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 1.2e-179 633.6 465 76.8
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 5.7e-179 631.3 465 70.5
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 5.7e-179 631.3 462 73.8
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 5.7e-179 631.3 446 75.8
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 7.5e-179 630.9 464 71.3
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 1.7e-178 629.8 464 71.3
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.2e-178 629.4 493 69.4
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 2.8e-178 629.0 465 71.8
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 3.7e-178 628.6 447 75.2
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 6.3e-178 627.9 459 71.7
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 8.3e-178 627.5 465 71.8
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 1.1e-177 627.1 465 70.8
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 4.1e-177 625.2 464 71.6
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 7.0e-177 624.4 511 65.8
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 5.9e-176 621.3 401 76.6
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.0e-175 620.5 465 71.0
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.0e-175 620.5 468 72.9
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.3e-175 620.2 473 70.8
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 2.9e-175 619.0 434 74.2
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 2.9e-175 619.0 467 72.4
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 5.5e-174 614.8 463 69.1
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 7.2e-174 614.4 419 74.5
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 1.2e-173 613.6 465 71.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 2.1e-173 612.8 466 71.9
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 1.4e-172 610.1 464 70.7
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 2.0e-171 606.3 399 76.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 2.6e-171 605.9 464 69.8
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 2.2e-170 602.8 464 69.6
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 2.2e-170 602.8 464 69.6
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 2.2e-170 602.8 464 69.6
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 4.9e-170 601.7 464 69.0
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.1e-169 600.5 465 69.5
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 1.4e-169 600.1 465 70.1
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 4.1e-169 598.6 465 70.8
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 7.0e-169 597.8 465 69.2
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 9.2e-169 597.4 466 70.8
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 2.7e-168 595.9 465 69.2
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 4.5e-168 595.1 464 69.0
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 5.9e-168 594.7 465 69.0
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 6.6e-167 591.3 488 67.6
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 2.5e-166 589.3 462 67.5
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 4.7e-165 585.1 452 68.1
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.8e-164 583.2 466 69.7
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.5e-163 580.1 447 67.1
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 2.9e-162 575.9 443 67.9
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.4e-161 573.5 415 72.8
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 3.9e-159 565.5 458 65.9
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 2.8e-157 559.3 398 72.9
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 1.5e-155 553.5 416 66.6
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 7.8e-144 514.6 316 83.2
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 1.6e-133 480.3 381 70.6
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 1.5e-131 473.8 414 58.9
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.7e-130 470.3 416 57.7
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 8.4e-122 441.4 398 56.0
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 3.0e-119 433.0 446 53.1
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.3e-101 374.4 403 52.1
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 8.5e-98 361.7 290 62.4
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.3e-93 347.8 261 73.9
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 4.5e-91 339.3 535 37.9
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 7.2e-73 278.9 188 74.5
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 4.0e-63 246.5 269 56.5
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 8.0e-56 222.2 183 62.8
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 1.0e-55 221.9 183 62.8
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.5e-51 206.5 207 58.0
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.6e-40 171.4 145 62.8
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 4.4e-38 163.3 146 61.0
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 5.8e-38 162.9 169 55.6
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.5e-33 148.3 123 68.3
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 3.6e-32 143.7 123 62.6
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.4e-28 131.0 373 29.5
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 1.4e-20 105.1 60 85.0
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.3e-18 97.8 57 87.7
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 2.2e-13 81.3 59 66.1
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.1e-12 79.0 69 66.7


User provided reference genes

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