Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003804g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-94 348.6 186 100.0
Nitab4.5_0000553g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-25 119.0 167 43.1
Nitab4.5_0000902g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-22 109.8 85 58.8
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 9.8e-21 104.4 87 54.0
Nitab4.5_0005004g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-19 98.2 87 51.7
Nitab4.5_0000175g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-18 96.3 82 57.3
Nitab4.5_0003302g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-18 95.5 72 61.1
Nitab4.5_0004168g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-17 93.6 119 42.9
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 1.7e-17 93.6 153 35.9
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-17 93.2 87 50.6
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-16 89.4 87 47.1
Nitab4.5_0003024g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-15 86.7 72 55.6
Nitab4.5_0000512g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-13 80.9 82 46.3
Nitab4.5_0005104g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-13 79.0 112 33.9
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 1.3e-12 77.4 78 42.3
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-12 77.0 84 42.9
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-12 75.9 84 41.7
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-12 75.1 84 41.7
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-12 74.7 88 38.6
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 8.3e-12 74.7 84 40.5
Sopen04g030310 Solanum pennellii HOM05D000024 ORTHO05D000007 1.4e-11 73.9 52 57.7
Nitab4.5_0000195g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-11 73.2 52 63.5
Nitab4.5_0000230g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-11 73.2 80 41.2
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-11 73.2 104 36.5
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 2.4e-11 73.2 84 40.5
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 2.4e-11 73.2 84 40.5
Sopen04g022700 Solanum pennellii HOM05D000024 ORTHO05D000007 5.4e-11 72.0 76 51.3
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 9.2e-11 71.2 84 39.3
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 9.2e-11 71.2 84 39.3
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-10 70.9 84 39.3
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 2.0e-10 70.1 84 41.7
PGSC0003DMG400035810 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.0e-10 70.1 84 38.1
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-10 69.7 97 37.1
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-10 69.3 84 39.3
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 3.5e-10 69.3 84 39.3
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-10 69.3 77 40.3
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-10 69.3 84 39.3
Sopen08g015220 Solanum pennellii HOM05D000024 ORTHO05D000007 3.5e-10 69.3 84 40.5
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 4.6e-10 68.9 84 38.1
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-10 68.9 84 38.1
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-10 68.6 95 36.8
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 6.0e-10 68.6 84 38.1
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-10 68.2 85 37.6
Nitab4.5_0000023g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-09 67.8 55 56.4
PGSC0003DMG400038477 Solanum tuberosum HOM05D008966 ORTHO05D011465 1.0e-09 67.8 84 38.1
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 1.3e-09 67.4 87 37.9
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-09 66.2 84 39.3
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 3.0e-09 66.2 87 36.8
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 3.9e-09 65.9 74 39.2
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-09 65.5 90 38.9
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-09 65.5 107 34.6
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 5.0e-09 65.5 84 36.9
Sopen08g015270 Solanum pennellii HOM05D000003 ORTHO05D009932 6.6e-09 65.1 84 38.1
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 6.6e-09 65.1 84 39.3
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 8.6e-09 64.7 83 34.9
PGSC0003DMG400043117 Solanum tuberosum HOM05D008966 ORTHO05D000007 8.6e-09 64.7 87 34.5
Nitab4.5_0000107g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-08 63.5 85 35.3
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 1.9e-08 63.5 74 37.8
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-08 63.5 84 38.1
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.9e-08 63.5 87 34.5
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 63.2 85 40.0
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 63.2 92 38.0
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-08 62.8 85 38.8
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 3.3e-08 62.8 69 40.6
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-08 62.8 77 37.7
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-08 62.4 92 34.8
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-08 62.0 84 32.1
Nitab4.5_0007697g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-08 62.0 87 32.2
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-08 61.6 84 38.1
Nitab4.5_0002004g0030 Nicotiana tabacum HOM05D001454 ORTHO05D000007 7.3e-08 61.6 90 34.4
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 9.5e-08 61.2 88 34.1
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 77 37.7
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-07 60.1 85 36.5
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-07 59.7 95 30.5
PGSC0003DMG400013852 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.8e-07 59.7 85 34.1
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 58.9 85 37.6
Peaxi162Scf00709g00322 Petunia axillaris HOM05D000024 ORTHO05D000007 4.7e-07 58.9 90 32.2
Sopen11g012710 Solanum pennellii HOM05D000014 ORTHO05D000016 6.2e-07 58.5 77 36.4
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-06 57.8 92 33.7
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.0 92 33.7
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.0 84 35.7
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.0 95 28.4
Sabra06G0000300 Salix brachista HOM05D000024 ORTHO05D000007 1.8e-06 57.0 83 36.1
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.8e-06 57.0 67 40.3
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-06 56.2 92 32.6
Sopen07g013730 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-06 56.2 71 39.4
Sopen08g015490 Solanum pennellii HOM05D000003 ORTHO05D000022 3.1e-06 56.2 59 40.7
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 55.8 79 36.7
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 55.8 92 32.6
Nitab4.5_0002157g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.0e-06 55.8 72 34.7
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 4.0e-06 55.8 84 35.7
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 55.5 84 33.3
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 55.5 85 31.8
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 6.8e-06 55.1 75 34.7
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-06 55.1 85 29.4


User provided reference genes

Program Settings