Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.9e-89 332.4 157 100.0
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 2.6e-22 109.4 145 48.3
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 2.8e-21 105.9 95 56.8
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 1.2e-19 100.5 95 54.7
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 2.7e-19 99.4 92 56.5
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 3.5e-19 99.0 135 47.4
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.0e-18 97.4 135 47.4
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 6.8e-15 84.7 110 42.7
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.5e-14 83.6 94 46.8
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 4.4e-14 82.0 101 41.6
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 1.3e-13 80.5 95 48.4
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 1.7e-13 80.1 94 46.8
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 6.3e-13 78.2 94 46.8
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 2.4e-12 76.3 102 40.2
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 3.1e-12 75.9 84 46.4
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.1e-12 75.9 96 43.8
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 4.1e-12 75.5 112 41.1
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 5.4e-12 75.1 95 40.0
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 1.2e-11 73.9 76 48.7
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 1.6e-11 73.6 95 40.0
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 1.6e-11 73.6 75 49.3
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.6e-11 73.6 96 41.7
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 5.9e-11 71.6 95 37.9
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 5.9e-11 71.6 96 43.8
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 1.3e-10 70.5 105 37.1
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 1.3e-10 70.5 96 39.6
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 1.7e-10 70.1 94 44.7
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 2.3e-10 69.7 75 48.0
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 2.3e-10 69.7 100 43.0
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 2.9e-10 69.3 77 49.4
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 2.9e-10 69.3 88 43.2
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 5.0e-10 68.6 84 44.0
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 5.0e-10 68.6 94 41.5
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 6.6e-10 68.2 97 40.2
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 6.6e-10 68.2 90 42.2
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 8.6e-10 67.8 80 47.5
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 8.6e-10 67.8 99 45.5
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 8.6e-10 67.8 94 41.5
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 8.6e-10 67.8 71 46.5
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 1.5e-09 67.0 75 46.7
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.5e-09 67.0 74 54.1
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.5e-09 67.0 74 54.1
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 1.5e-09 67.0 74 54.1
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 1.9e-09 66.6 80 48.8
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 3.3e-09 65.9 75 46.7
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 3.3e-09 65.9 72 45.8
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 3.3e-09 65.9 92 40.2
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 4.3e-09 65.5 74 50.0
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 4.3e-09 65.5 74 50.0
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 4.3e-09 65.5 79 41.8
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 7.3e-09 64.7 70 48.6
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 7.3e-09 64.7 75 44.0
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 9.5e-09 64.3 74 47.3
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 9.5e-09 64.3 73 49.3
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.2e-08 63.9 74 52.7
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.2e-08 63.9 74 51.4
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 1.2e-08 63.9 73 45.2
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 1.6e-08 63.5 111 37.8
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.8e-08 62.8 89 38.2
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 3.6e-08 62.4 70 47.1
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 3.6e-08 62.4 102 38.2
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 3.6e-08 62.4 70 45.7
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 3.6e-08 62.4 75 44.0
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 3.6e-08 62.4 73 49.3
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 3.6e-08 62.4 73 49.3
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 3.6e-08 62.4 75 46.7
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 6.1e-08 61.6 75 45.3
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 8.0e-08 61.2 77 44.2
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 1.0e-07 60.8 72 50.0
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 1.0e-07 60.8 97 38.1
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 1.0e-07 60.8 70 45.7
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 1.8e-07 60.1 95 38.9
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 3.0e-07 59.3 72 50.0
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 3.0e-07 59.3 72 50.0
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 3.0e-07 59.3 71 43.7
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 3.0e-07 59.3 89 39.3
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 4.0e-07 58.9 71 43.7
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 5.2e-07 58.5 71 43.7
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 8.9e-07 57.8 89 37.1
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 1.2e-06 57.4 70 42.9
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.2e-06 57.4 89 37.1
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 1.2e-06 57.4 94 38.3
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 1.2e-06 57.4 76 46.1
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.5e-06 57.0 72 48.6
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.5e-06 57.0 72 48.6
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 3.4e-06 55.8 70 44.3
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 3.4e-06 55.8 97 38.1
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 4.4e-06 55.5 72 45.8
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 4.4e-06 55.5 72 41.7
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 4.4e-06 55.5 150 26.7
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 5.8e-06 55.1 71 40.8
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 5.8e-06 55.1 81 35.8


User provided reference genes

Program Settings