Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003698g0060 Nicotiana tabacum HOM05D005442 ORTHO05D006450 9.6e-133 476.9 247 100.0
Peaxi162Scf00362g00530 Petunia axillaris HOM05D005442 ORTHO05D006450 7.5e-77 291.2 330 54.2
CAN.G588.92 Capsicum annuum HOM05D005442 ORTHO05D006450 3.6e-71 272.3 343 51.9
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 9.8e-69 264.2 329 51.4
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 6.4e-68 261.5 329 51.1
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 1.1e-67 260.8 329 50.8
CSS0044298 Camellia sinensis var. sinensis HOM05D005442 ORTHO05D006450 2.6e-13 80.1 340 29.1
Lj5A177G54 Lonicera japonica HOM05D005442 ORTHO05D006450 5.9e-13 79.0 255 31.8
vmacro17319 Vaccinium macrocarpon HOM05D005442 ORTHO05D006450 1.3e-12 77.8 263 31.9
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 2.2e-12 77.0 60 61.7
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 1.9e-11 73.9 47 72.3
GSVIVG01023996001 Vitis vinifera HOM05D005442 ORTHO05D006450 1.9e-11 73.9 47 66.0
Aqoxy6G02079 Aquilegia oxysepala HOM05D005442 ORTHO05D006450 2.5e-11 73.6 153 36.6
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 2.5e-11 73.6 67 55.2
TAR376G0424 Trochodendron aralioides HOM05D005442 ORTHO05D006450 4.2e-11 72.8 47 70.2
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 5.5e-11 72.4 47 70.2
TAR369G0572 Trochodendron aralioides HOM05D005442 ORTHO05D006450 5.5e-11 72.4 68 54.4
Actinidia21468 Actinidia chinensis HOM05D005442 ORTHO05D006450 7.2e-11 72.0 47 68.1
Actinidia39159 Actinidia chinensis HOM05D005442 ORTHO05D006450 7.2e-11 72.0 47 68.1
ATR0763G134 Amborella trichopoda HOM05D005442 ORTHO05D006450 2.7e-10 70.1 59 52.5
Eucgr.I01451 Eucalyptus grandis HOM05D005442 ORTHO05D006450 4.6e-10 69.3 243 32.9
Lsat_1_v5_gn_6_13820 Lactuca sativa HOM05D005442 ORTHO05D006450 4.6e-10 69.3 47 66.0
Nn1g06499 Nelumbo nucifera HOM05D005442 ORTHO05D006450 1.0e-09 68.2 44 65.9
SGA_v2.0_scaffold58G20356 Striga asiatica HOM05D002097 ORTHO05D002248 2.3e-09 67.0 227 27.3
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 3.9e-09 66.2 241 28.2
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 5.1e-09 65.9 44 70.5
Rhsim05G0053500 Rhododendron simsii HOM05D005442 ORTHO05D006450 8.7e-09 65.1 267 29.2
PSO541G1416 Papaver somniferum HOM05D005442 ORTHO05D006450 1.1e-08 64.7 51 60.8
Sed0001500 Sechium edule HOM05D005442 ORTHO05D006450 1.9e-08 63.9 211 31.8
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 1.9e-08 63.9 39 74.4
Gorai.005G254900 Gossypium raimondii HOM05D005442 ORTHO05D006450 4.3e-08 62.8 51 58.8
SalBow1G0486 Salvia bowleyana HOM05D005442 ORTHO05D006450 1.3e-07 61.2 61 49.2
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 1.6e-07 60.8 40 67.5
Ciclev10028168m.g Citrus clementina HOM05D005442 ORTHO05D006450 2.8e-07 60.1 260 30.4
Atru.chr3.3284 Acer truncatum HOM05D005442 ORTHO05D006450 3.7e-07 59.7 42 61.9
Cpa.g.sc20.103 Carica papaya HOM05D005442 ORTHO05D006450 4.8e-07 59.3 215 31.6
Duzib132G0277 Durio zibethinus HOM05D005442 ORTHO05D006450 4.8e-07 59.3 215 28.8
ClCG02G012030 Citrullus lanatus HOM05D005442 ORTHO05D006450 6.3e-07 58.9 174 33.3
MELO3C020828.2 Cucumis melo HOM05D005442 ORTHO05D006450 6.3e-07 58.9 215 32.1
DCAR_011887 Daucus carota HOM05D005442 ORTHO05D006450 6.3e-07 58.9 124 35.5
PSO675G1865 Papaver somniferum HOM05D005442 ORTHO05D006450 8.2e-07 58.5 111 40.5
Hund06446 Selenicereus undatus HOM05D005442 ORTHO05D006450 8.2e-07 58.5 219 29.7
CsaV3_2G016200 Cucumis sativus L. HOM05D005442 ORTHO05D006450 1.1e-06 58.2 202 33.2
Oeu032532.1 Olea europaea HOM05D005442 ORTHO05D006450 1.4e-06 57.8 39 69.2
PGR142G2067 Punica granatum HOM05D005442 ORTHO05D006450 1.8e-06 57.4 253 29.2
Manes.01G140900 Manihot esculenta HOM05D005442 ORTHO05D006450 2.4e-06 57.0 277 28.5
Thecc.02G056900 Theobroma cacao HOM05D005442 ORTHO05D006450 2.4e-06 57.0 315 27.3
HPP92_022198 Vanilla planifolia HOM05D005442 ORTHO05D006450 3.1e-06 56.6 126 29.4
Cfa023336 Carpinus fangiana HOM05D005442 ORTHO05D006450 5.3e-06 55.8 209 25.4
Zm00001eb134390 Zea mays HOM05D005442 ORTHO05D006450 5.3e-06 55.8 233 28.8
Gohir.A03G205700 Gossypium hirsutum HOM05D005442 ORTHO05D006450 6.9e-06 55.5 131 35.1
Gohir.D02G227000 Gossypium hirsutum HOM05D005442 ORTHO05D006450 6.9e-06 55.5 164 34.1


User provided reference genes

Program Settings