Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 4.1e-90 334.7 172 100.0
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.7e-83 312.8 172 94.8
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 2.2e-83 312.4 172 93.0
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 2.2e-83 312.4 172 93.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 9.2e-82 307.0 172 91.9
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 2.0e-81 305.8 173 91.9
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.5e-71 273.1 173 82.1
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 7.3e-71 270.8 173 80.9
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 3.1e-69 265.4 178 80.3
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 7.6e-68 260.8 173 78.6
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 7.6e-68 260.8 173 78.0
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 7.6e-68 260.8 174 79.3
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 2.9e-67 258.8 173 76.9
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 4.9e-67 258.1 173 78.0
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.9e-66 256.1 175 77.1
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.9e-66 256.1 172 76.2
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 1.9e-66 256.1 173 78.0
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.2e-66 255.4 173 75.7
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 3.2e-66 255.4 173 75.7
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 3.2e-66 255.4 173 75.7
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 4.1e-66 255.0 173 76.3
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 5.4e-66 254.6 173 76.3
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 7.1e-66 254.2 173 75.7
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.2e-65 253.4 174 78.7
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 1.2e-65 253.4 172 75.0
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.6e-65 253.1 173 75.7
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 2.1e-65 252.7 174 75.3
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 2.7e-65 252.3 174 77.6
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 6.0e-65 251.1 173 74.6
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 1.0e-64 250.4 173 75.7
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.0e-64 250.4 175 76.0
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 1.7e-64 249.6 173 75.7
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.3e-64 249.2 174 76.4
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 2.3e-64 249.2 174 77.0
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 2.3e-64 249.2 173 74.0
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 3.0e-64 248.8 172 75.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 3.9e-64 248.4 174 77.0
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 5.1e-64 248.1 173 74.0
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 6.6e-64 247.7 174 76.4
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.5e-63 246.5 173 75.1
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.5e-63 246.5 173 75.1
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.5e-63 246.5 173 75.1
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.9e-63 246.1 173 75.7
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 2.5e-63 245.7 173 74.0
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 4.3e-63 245.0 173 74.6
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 9.6e-63 243.8 173 71.7
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 9.6e-63 243.8 164 78.7
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 9.6e-63 243.8 173 73.4
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 9.6e-63 243.8 174 74.1
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.2e-62 243.4 174 74.1
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 8.1e-62 240.7 174 75.9
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 1.1e-61 240.4 175 74.9
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.4e-61 240.0 168 75.6
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 3.1e-61 238.8 174 74.1
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 4.0e-61 238.4 174 73.0
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 5.2e-61 238.0 177 72.3
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 5.2e-61 238.0 167 74.9
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 2.6e-60 235.7 167 76.0
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 4.4e-60 235.0 175 72.6
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 5.8e-60 234.6 176 73.3
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 7.6e-60 234.2 174 71.8
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 2.2e-59 232.6 172 70.9
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.9e-59 232.3 173 71.1
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 3.8e-59 231.9 174 70.1
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 8.4e-59 230.7 174 70.7
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 70.7
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 70.7
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 70.7
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 70.7
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.1e-58 230.3 174 71.8
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 1.4e-58 229.9 175 68.6
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.4e-58 229.9 174 70.7
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.9e-58 229.6 174 70.1
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 2.4e-58 229.2 174 70.1
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 3.2e-58 228.8 174 70.1
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 3.2e-58 228.8 174 70.1
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 3.2e-58 228.8 152 78.9
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 5.4e-58 228.0 174 69.5
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 9.3e-58 227.3 177 71.8
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 1.2e-57 226.9 172 72.1
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 2.7e-57 225.7 175 69.7
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.3e-56 223.4 174 70.1
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.7e-56 223.0 173 69.9
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 2.3e-56 222.6 175 69.7
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 3.1e-53 212.2 150 79.3
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 1.2e-52 210.3 174 67.8
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.0e-52 209.5 138 76.1
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 4.5e-52 208.4 152 75.0
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 5.8e-52 208.0 168 66.7
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 1.3e-51 206.8 173 66.5
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 3.8e-51 205.3 172 66.3
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 7.1e-50 201.1 140 72.9
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 4.6e-49 198.4 178 61.2
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 1.8e-48 196.4 175 59.4
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 8.7e-48 194.1 172 61.6
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 7.4e-47 191.0 151 70.2
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 2.9e-43 179.1 153 65.4
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 1.4e-42 176.8 137 74.5
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 7.1e-42 174.5 180 56.1
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.3e-40 169.5 143 69.9
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 8.7e-40 167.5 164 61.6
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 2.5e-39 166.0 116 76.7
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.3e-35 153.7 137 65.7
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 3.8e-35 152.1 161 56.5
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.4e-34 150.2 137 63.5
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 1.3e-30 137.1 114 70.2
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.9e-26 123.2 106 67.9
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.2e-25 120.6 172 43.0
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 6.1e-25 118.2 108 65.7
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 3.0e-24 115.9 112 65.2
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 9.7e-23 110.9 97 64.9
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 1.4e-21 107.1 164 42.7
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 3.2e-18 95.9 69 78.3
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 3.0e-16 89.4 106 54.7
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 8.2e-14 81.3 75 57.3
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 7.7e-12 74.7 68 61.8
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.3e-11 73.9 88 56.8
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 2.2e-11 73.2 61 67.2
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 6.5e-11 71.6 61 65.6
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 1.1e-10 70.9 121 47.1
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 1.9e-10 70.1 83 54.2
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 2.5e-10 69.7 93 49.5
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 4.2e-10 68.9 107 48.6
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 5.5e-10 68.6 62 66.1
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 7.2e-10 68.2 95 49.5
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 9.4e-10 67.8 61 62.3
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.6e-09 67.0 61 60.7
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 3.6e-09 65.9 61 63.9
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 2.0e-07 60.1 139 36.7
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 9.7e-07 57.8 87 49.4
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-06 57.4 43 72.1
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 2.2e-06 56.6 71 53.5
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 4.8e-06 55.5 43 69.8
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 4.8e-06 55.5 78 50.0


User provided reference genes

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