Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003291g0040 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.0e-168 596.7 300 100.0
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 8.4e-131 470.7 293 85.0
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 1.9e-130 469.5 293 84.6
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 1.8e-125 453.0 293 81.2
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 9.0e-125 450.7 294 81.0
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 2.6e-124 449.1 293 80.9
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 1.0e-115 420.6 293 72.4
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 8.4e-115 417.5 293 72.4
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.9e-114 416.4 293 71.7
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 5.5e-114 414.8 293 72.7
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 9.3e-114 414.1 293 70.6
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 9.3e-114 414.1 297 69.4
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 9.3e-114 414.1 293 71.3
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 1.6e-113 413.3 293 71.3
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 1.6e-113 413.3 293 72.0
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 6.0e-113 411.4 293 70.6
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 6.0e-113 411.4 293 70.0
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 7.9e-113 411.0 293 71.3
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 3.9e-112 408.7 293 70.0
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 6.7e-112 407.9 293 70.0
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 9.6e-111 404.1 293 70.0
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 9.6e-111 404.1 293 68.6
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.3e-110 403.7 293 69.3
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 1.3e-110 403.7 293 68.6
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 1.3e-110 403.7 293 69.3
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 2.1e-110 402.9 293 68.9
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 3.7e-110 402.1 293 69.3
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 8.2e-110 401.0 293 68.9
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 8.2e-110 401.0 293 68.9
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 2.4e-109 399.4 293 69.3
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 2.4e-109 399.4 293 69.3
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 9.0e-109 397.5 294 68.7
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 1.5e-108 396.7 293 67.6
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 2.0e-108 396.4 292 68.2
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 2.0e-108 396.4 292 68.8
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 2.6e-108 396.0 293 67.2
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 3.4e-108 395.6 293 68.9
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 5.9e-108 394.8 298 67.4
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 5.9e-108 394.8 293 67.2
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 5.9e-108 394.8 293 67.2
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 1.0e-107 394.0 293 68.6
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 1.3e-107 393.7 293 69.3
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 8.4e-107 391.0 293 69.3
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.4e-106 390.2 293 68.3
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 2.5e-106 389.4 293 68.6
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 2.5e-106 389.4 293 66.2
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 3.2e-106 389.0 293 66.6
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 3.2e-106 389.0 293 66.6
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 4.2e-106 388.7 293 66.6
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 7.2e-106 387.9 293 65.9
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 9.3e-106 387.5 293 67.6
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 1.2e-105 387.1 293 67.2
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 2.1e-105 386.3 295 66.8
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 2.1e-105 386.3 293 66.6
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 3.5e-105 385.6 293 68.6
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 4.6e-105 385.2 293 68.6
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 4.6e-105 385.2 293 65.2
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 1.0e-104 384.0 292 67.1
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 3.9e-104 382.1 293 65.9
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 3.9e-104 382.1 296 64.9
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 3.9e-104 382.1 294 65.3
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 5.1e-104 381.7 293 66.9
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.1e-103 380.6 370 56.5
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 2.5e-103 379.4 293 66.6
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 3.3e-103 379.0 293 65.2
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 5.7e-103 378.3 301 63.5
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.3e-102 377.1 292 66.1
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 1.3e-102 377.1 310 62.3
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 1.6e-102 376.7 296 63.5
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 2.2e-102 376.3 306 62.4
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 2.2e-102 376.3 306 62.4
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 2.2e-102 376.3 306 62.4
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 2.2e-102 376.3 306 62.4
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 3.7e-102 375.6 293 64.8
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 6.3e-102 374.8 293 71.3
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 1.1e-101 374.0 307 61.9
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 1.1e-101 374.0 293 65.5
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.4e-101 373.6 293 65.2
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 2.4e-101 372.9 293 65.2
Os08g0223833 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 5.3e-101 371.7 257 70.4
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 4.5e-100 368.6 293 64.5
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 4.5e-100 368.6 292 65.4
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 1.7e-99 366.7 331 57.7
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 5.0e-99 365.2 293 63.1
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 8.5e-99 364.4 300 61.7
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 2.5e-98 362.8 333 56.8
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 3.2e-98 362.5 293 62.5
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 3.2e-98 362.5 293 62.5
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 7.2e-98 361.3 293 62.1
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 7.2e-98 361.3 300 61.7
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 2.1e-97 359.8 293 62.8
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 4.6e-97 358.6 332 59.0
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 7.9e-97 357.8 293 63.5
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 5.1e-96 355.1 292 62.0
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 1.3e-94 350.5 295 62.7
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.8e-94 349.4 341 54.5
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 1.1e-93 347.4 296 60.5
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 5.3e-93 345.1 262 69.1
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 4.5e-92 342.0 327 57.8
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 4.5e-92 342.0 293 61.8
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 5.9e-92 341.7 293 60.1
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 1.1e-90 337.4 294 62.2
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 1.1e-90 337.4 294 62.2
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 1.9e-90 336.7 293 60.4
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 1.2e-89 334.0 292 59.6
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 1.1e-87 327.4 293 59.4
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 4.8e-86 322.0 300 57.7
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 4.1e-85 318.9 297 55.9
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 2.2e-83 313.2 256 64.5
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 5.0e-83 312.0 317 54.3
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 8.8e-80 301.2 293 55.3
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 2.0e-79 300.1 324 51.2
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 1.1e-77 294.3 236 69.9
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 2.9e-75 286.2 289 56.4
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 5.2e-72 275.4 245 58.4
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 4.8e-70 268.9 293 51.2
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 8.5e-67 258.1 299 49.2
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 2.5e-66 256.5 293 51.9
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 7.2e-66 255.0 168 77.4
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 2.0e-63 246.9 293 49.5
unitig_32.g11074 Utricularia gibba HOM05D003169 ORTHO05D003700 9.8e-63 244.6 256 52.3
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 3.7e-62 242.7 300 48.7
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 4.9e-62 242.3 296 48.3
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 8.6e-59 231.5 245 50.2
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 4.3e-58 229.2 207 59.9
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 1.5e-50 204.1 277 45.5
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.8e-48 197.2 168 61.9
BcaB02g08681 Brassica carinata HOM05D003169 ORTHO05D003700 5.2e-48 195.7 171 63.7
Thhalv10000653m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.7e-43 180.6 154 63.0
Aqoxy1G03228 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 9.8e-39 164.9 139 61.9
TPR.G14822 Trifolium pratense HOM05D003169 ORTHO05D003700 1.9e-37 160.6 249 40.6
MBI18_g40795_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 3.0e-35 153.3 112 70.5
MBI18_g37376_MAGBIO Magnolia biondii HOM05D003169 ORTHO05D003700 3.9e-35 152.9 108 66.7
CBR_g11926 Chara braunii HOM05D003169 ORTHO05D000002 1.9e-34 150.6 164 53.7
SEGI_14617 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 8.1e-33 145.2 131 55.7
Oeu032680.1 Olea europaea HOM05D003169 ORTHO05D003700 7.6e-31 138.7 128 57.0
MCO16G570 Micromonas commoda HOM05D003169 ORTHO05D003700 1.2e-23 114.8 303 33.3
TPR.G20402 Trifolium pratense HOM05D003169 ORTHO05D003700 2.2e-22 110.5 60 91.7
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 2.9e-22 110.2 180 38.3
Nitab4.5_0009958g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 4.6e-20 102.8 59 84.7
Cre01.g053250 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 9.6e-18 95.1 330 29.4
Haze_26591 Corylus avellana HOM05D003169 ORTHO05D003700 2.4e-16 90.5 307 27.4
Cre02.g095045 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 4.5e-15 86.3 321 27.4
MCO01G648 Micromonas commoda HOM05D003169 ORTHO05D003700 1.7e-14 84.3 290 30.0
TPR.G40298 Trifolium pratense HOM05D003169 ORTHO05D003700 9.3e-13 78.6 88 45.5
Ciclev10006112m.g Citrus clementina HOM05D003169 ORTHO05D003700 1.6e-12 77.8 55 65.5
TPR.G40025 Trifolium pratense HOM05D003169 ORTHO05D003700 2.7e-12 77.0 108 39.8
PRCOL_00005992 Prasinoderma coloniale HOM05D003169 ORTHO05D003700 3.5e-12 76.6 224 29.9
Cre07.g350100 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 7.9e-12 75.5 377 24.7
Cre13.g578501 Chlamydomonas reinhardtii HOM05D003169 ORTHO05D003700 3.9e-11 73.2 74 52.7
VMungo1127G0538 Vigna mungo HOM05D003169 ORTHO05D003700 5.1e-11 72.8 48 68.8
CARHR073010 Cardamine hirsuta HOM05D003169 ORTHO05D003700 1.4e-08 64.7 34 91.2
TPR.G39754 Trifolium pratense HOM05D003169 ORTHO05D003700 5.8e-07 59.3 152 33.6


User provided reference genes

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