Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.2e-186 655.6 361 100.0
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 7.2e-169 597.4 361 92.5
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 6.7e-143 511.1 362 79.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 3.3e-142 508.8 378 75.7
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 6.8e-135 484.6 351 78.6
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 1.5e-113 413.7 368 68.2
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 7.6e-94 348.2 356 59.3
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 6.9e-87 325.1 380 56.8
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.7e-85 320.5 374 54.8
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 4.6e-83 312.4 293 62.8
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 4.3e-81 305.8 377 52.5
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 8.1e-80 301.6 363 54.0
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.5e-78 297.4 285 61.8
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 3.4e-78 296.2 376 55.1
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 4.9e-77 292.4 292 59.6
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 3.2e-76 289.7 289 60.2
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.6e-75 287.3 366 52.2
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 4.6e-75 285.8 311 58.2
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.6e-75 285.8 302 55.6
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 6.0e-75 285.4 285 57.2
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.3e-74 284.3 293 59.4
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 1.3e-74 284.3 297 58.6
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 3.9e-74 282.7 356 52.2
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.9e-73 280.4 248 63.3
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 2.5e-73 280.0 223 72.2
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 2.5e-73 280.0 286 58.0
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 3.3e-73 279.6 291 57.7
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 5.6e-73 278.9 357 54.3
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 1.3e-72 277.7 287 54.7
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 3.1e-71 273.1 301 56.1
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 5.3e-71 272.3 277 58.1
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.5e-70 270.8 289 57.1
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 4.5e-70 269.2 287 55.4
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 4.5e-70 269.2 291 57.7
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.9e-69 265.8 357 51.3
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.4e-69 265.4 290 56.2
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 1.9e-68 263.8 367 48.5
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 3.2e-68 263.1 278 59.4
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 4.2e-68 262.7 361 50.4
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 5.5e-68 262.3 270 56.7
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.2e-67 261.2 278 59.0
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 2.1e-67 260.4 358 49.7
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.0e-66 258.1 274 58.0
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.0e-66 258.1 371 47.7
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 5.1e-66 255.8 297 53.9
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 8.7e-66 255.0 291 55.7
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 8.7e-66 255.0 411 47.7
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 8.7e-66 255.0 296 56.4
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.1e-65 254.6 286 54.2
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 1.5e-65 254.2 293 54.9
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 2.5e-65 253.4 307 52.8
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 4.3e-65 252.7 296 57.1
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.3e-65 252.7 307 54.7
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 4.3e-65 252.7 300 53.7
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 5.6e-65 252.3 289 54.7
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 9.6e-65 251.5 282 53.9
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 9.6e-65 251.5 321 52.6
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 2.1e-64 250.4 287 53.3
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 2.8e-64 250.0 287 54.0
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 8.1e-64 248.4 288 53.1
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.1e-63 248.1 290 53.1
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.1e-63 248.1 274 54.4
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 3.1e-63 246.5 292 51.7
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 4.0e-63 246.1 294 54.8
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 4.0e-63 246.1 370 47.6
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 5.3e-63 245.7 272 55.5
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 6.9e-63 245.4 271 54.6
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.5e-62 244.2 289 51.6
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 2.6e-62 243.4 364 47.8
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.5e-62 242.7 269 56.5
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 7.6e-62 241.9 273 56.0
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 7.6e-62 241.9 288 52.4
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 7.6e-62 241.9 313 50.5
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 1.0e-61 241.5 282 53.5
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 1.3e-61 241.1 375 48.3
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 3.8e-61 239.6 291 52.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 3.8e-61 239.6 261 53.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 6.5e-61 238.8 269 55.8
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.9e-60 237.3 307 52.8
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.9e-60 237.3 275 53.1
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.2e-60 236.5 283 54.4
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 3.5e-59 233.0 370 44.9
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 6.7e-58 228.8 292 50.7
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 6.7e-58 228.8 280 52.1
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 1.1e-57 228.0 279 52.3
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.1e-57 228.0 496 36.7
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 5.7e-57 225.7 273 51.3
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.1e-56 223.8 280 51.4
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.8e-56 223.4 366 46.4
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 3.1e-55 219.9 361 45.4
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 2.0e-54 217.2 208 61.1
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.0e-53 214.9 299 46.8
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 2.9e-53 213.4 198 63.1
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 7.2e-52 208.8 293 46.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.7e-51 206.8 276 51.8
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 3.6e-51 206.5 284 47.9
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 3.6e-51 206.5 271 47.6
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.9e-49 200.7 238 51.3
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 3.1e-47 193.4 238 50.0
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 5.9e-46 189.1 336 41.4
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 7.7e-46 188.7 276 46.0
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 5.0e-45 186.0 296 44.3
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.1e-44 184.9 417 36.2
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 7.9e-43 178.7 267 46.8
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 8.2e-40 168.7 349 38.1
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.8e-39 167.5 156 59.6
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.0e-38 164.1 301 40.9
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 3.3e-33 146.7 256 41.8
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.7e-32 144.4 247 40.9
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 1.4e-31 141.4 292 43.5
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 1.0e-29 135.2 256 37.1
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.8e-24 117.1 239 37.7
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 3.7e-24 116.7 325 35.4
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 4.2e-20 103.2 85 65.9
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 9.4e-20 102.1 172 42.4
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 9.4e-20 102.1 278 33.5
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.2e-19 101.7 163 44.2
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 5.7e-17 92.8 301 30.6
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 2.3e-10 70.9 108 45.4
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 3.0e-10 70.5 210 31.9
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 3.4e-09 67.0 232 28.9
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 2.7e-06 57.4 198 33.8
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 5.9e-06 56.2 199 33.2


User provided reference genes

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