Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003259g0050 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.4e-63 246.1 123 100.0
Nitab4.5_0000555g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.4e-33 144.1 76 82.9
Nitab4.5_0008877g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 9.6e-33 143.7 76 84.2
Nitab4.5_0000555g0060 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.8e-26 122.9 111 55.0
CAN.G137.56 Capsicum annuum HOM05D000888 ORTHO05D000740 6.7e-26 120.9 94 64.9
CAN.G546.36 Capsicum annuum HOM05D000888 ORTHO05D000740 6.7e-26 120.9 95 70.5
CAN.G950.1 Capsicum annuum HOM05D000888 ORTHO05D000740 3.3e-25 118.6 76 68.4
Sopen08g002160 Solanum pennellii HOM05D000888 ORTHO05D000740 2.2e-24 115.9 76 65.8
Nitab4.5_0012696g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 8.2e-24 114.0 93 58.1
Peaxi162Scf00326g00321 Petunia axillaris HOM05D000888 ORTHO05D000740 1.1e-23 113.6 76 69.7
CAN.G673.5 Capsicum annuum HOM05D000888 ORTHO05D000740 1.4e-23 113.2 96 64.6
Solyc08g006200.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.4e-23 113.2 76 64.5
Peaxi162Scf00045g01644 Petunia axillaris HOM05D000180 ORTHO05D000740 3.4e-22 108.6 94 57.4
Peaxi162Scf00192g01213 Petunia axillaris HOM05D000888 ORTHO05D000740 4.5e-22 108.2 76 67.1
Nitab4.5_0000555g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.9e-22 107.8 99 58.6
PGSC0003DMG400043722 Solanum tuberosum HOM05D000888 ORTHO05D000740 1.3e-21 106.7 78 65.4
PGSC0003DMG400013589 Solanum tuberosum HOM05D000888 ORTHO05D000740 6.5e-21 104.4 78 64.1
Nitab4.5_0000555g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.2e-20 102.1 78 62.8
Solyc08g006483.1 Solanum lycopersicum HOM05D000888 ORTHO05D000740 3.2e-20 102.1 78 62.8
CAN.G757.2 Capsicum annuum HOM05D000888 ORTHO05D000740 7.2e-20 100.9 85 60.0
Nitab4.5_0000025g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.1e-19 99.4 79 62.0
Peaxi162Scf00045g01638 Petunia axillaris HOM05D000888 ORTHO05D000740 2.1e-19 99.4 78 60.3
Nitab4.5_0012696g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.0e-18 97.1 77 59.7
Nitab4.5_0000555g0110 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.8e-18 96.3 77 63.6
Nitab4.5_0000555g0080 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.0e-18 95.5 78 59.0
PGSC0003DMG402009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 3.9e-18 95.1 77 58.4
Nitab4.5_0007342g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.7e-18 94.4 77 59.7
Sopen08g002250 Solanum pennellii HOM05D000888 ORTHO05D000740 8.8e-18 94.0 77 58.4
Nitab4.5_0000025g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.1e-17 93.6 77 58.4
Sopen08g002220 Solanum pennellii HOM05D000888 ORTHO05D000740 1.1e-17 93.6 77 55.8
CAN.G1238.29 Capsicum annuum HOM05D000888 ORTHO05D000740 2.5e-17 92.4 77 57.1
Nitab4.5_0010282g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.5e-17 92.4 77 57.1
Nitab4.5_0000025g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.3e-17 92.0 100 47.0
Nitab4.5_0013923g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.3e-17 92.0 77 61.0
Solyc08g006240.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 3.3e-17 92.0 77 55.8
CAN.G137.58 Capsicum annuum HOM05D000888 ORTHO05D000740 4.3e-17 91.7 77 57.1
Nitab4.5_0012696g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.3e-17 91.7 80 56.2
CAN.G757.1 Capsicum annuum HOM05D000888 ORTHO05D000740 1.7e-16 89.7 80 53.8
CAN.G757.6 Capsicum annuum HOM05D000888 ORTHO05D000740 1.7e-16 89.7 82 48.8
Peaxi162Scf00045g01642 Petunia axillaris HOM05D000888 ORTHO05D000740 2.8e-16 89.0 77 55.8
Solyc08g006270.1 Solanum lycopersicum HOM05D000888 ORTHO05D000740 2.8e-16 89.0 77 55.8
Nitab4.5_0008877g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.3e-16 87.8 77 55.8
CAN.G1342.9 Capsicum annuum HOM05D000888 ORTHO05D000740 8.2e-16 87.4 60 65.0
Peaxi162Scf00205g00721 Petunia axillaris HOM05D000888 ORTHO05D000740 1.8e-15 86.3 75 58.7
Sopen08g002190 Solanum pennellii HOM05D000888 ORTHO05D000740 1.8e-15 86.3 77 55.8
PGSC0003DMG401009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 3.1e-15 85.5 77 51.9
Peaxi162Scf00045g01537 Petunia axillaris HOM05D000888 ORTHO05D000740 4.1e-15 85.1 77 53.2
Sopen08g002170 Solanum pennellii HOM05D000888 ORTHO05D000740 9.1e-15 84.0 77 50.6
Nitab4.5_0008877g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.5e-14 83.2 78 50.0
PGSC0003DMG400009538 Solanum tuberosum HOM05D000888 ORTHO05D000740 1.5e-14 83.2 77 53.2
CAN.G137.57 Capsicum annuum HOM05D000888 ORTHO05D000740 1.0e-13 80.5 77 45.5
Solyc08g006280.2 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.0e-13 80.5 84 44.0
Sopen08g002260 Solanum pennellii HOM05D000888 ORTHO05D000740 1.0e-13 80.5 84 44.0
CAN.G241.28 Capsicum annuum HOM05D000888 ORTHO05D000740 2.2e-13 79.3 76 50.0
Nitab4.5_0012583g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.8e-13 78.6 79 46.8
Nitab4.5_0008877g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.0e-13 78.2 76 47.4
Solyc08g006210.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 5.0e-13 78.2 77 44.2
Peaxi162Scf00346g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 8.5e-13 77.4 77 48.1
Sopen08g002180 Solanum pennellii HOM05D000888 ORTHO05D000740 8.5e-13 77.4 77 44.2
Nitab4.5_0010282g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.4e-12 76.6 67 62.7
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 5.5e-12 74.7 78 43.6
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 5.5e-12 74.7 78 43.6
Peaxi162Scf01723g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 5.5e-12 74.7 77 46.8
Peaxi162Scf01636g00008 Petunia axillaris HOM05D000888 ORTHO05D000740 1.6e-11 73.2 77 48.1
Peaxi162Scf00192g01414 Petunia axillaris HOM05D000888 ORTHO05D000740 2.7e-11 72.4 79 44.3
Sopen08g002240 Solanum pennellii HOM05D000888 ORTHO05D000740 2.7e-11 72.4 77 41.6
CAN.G757.4 Capsicum annuum HOM05D000888 ORTHO05D000740 4.7e-11 71.6 77 41.6
Solyc08g006230.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 6.1e-11 71.2 76 50.0
CAN.G1632.18 Capsicum annuum HOM05D000888 ORTHO05D000740 7.9e-11 70.9 77 41.6
CSS0028692 Camellia sinensis var. sinensis HOM05D000888 ORTHO05D000740 2.3e-10 69.3 80 45.0
CAN.G137.44 Capsicum annuum HOM05D000888 ORTHO05D000740 5.1e-10 68.2 77 45.5
Cc07_g12890 Coffea canephora HOM05D000888 ORTHO05D000740 2.0e-09 66.2 79 41.8
Lsat_1_v5_gn_1_43540 Lactuca sativa HOM05D000888 ORTHO05D000740 9.7e-09 63.9 82 43.9
HanXRQChr01g0030511 Helianthus annuus HOM05D000888 ORTHO05D000740 1.3e-08 63.5 77 42.9
Cc05_g09340 Coffea canephora HOM05D000888 ORTHO05D000740 2.2e-08 62.8 78 34.6
Solyc08g006190.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 2.8e-08 62.4 81 35.8
CAN.G1941.1 Capsicum annuum HOM05D000888 ORTHO05D000740 4.8e-08 61.6 77 41.6
Actinidia06436 Actinidia chinensis HOM05D000888 ORTHO05D000740 6.3e-08 61.2 79 40.5
CAN.G220.23 Capsicum annuum HOM05D000888 ORTHO05D000740 6.3e-08 61.2 74 39.2
Nitab4.5_0000025g0140 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.3e-08 61.2 77 40.3
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 6.3e-08 61.2 77 41.6
Peaxi162Scf00192g01413 Petunia axillaris HOM05D000888 ORTHO05D000740 6.3e-08 61.2 69 46.4
CAN.G1342.8 Capsicum annuum HOM05D000888 ORTHO05D000740 1.1e-07 60.5 78 38.5
HanXRQChr01g0014891 Helianthus annuus HOM05D000888 ORTHO05D000740 1.4e-07 60.1 81 38.3
Sc07g0007340 Simmondsia chinensis HOM05D000888 ORTHO05D000740 1.8e-07 59.7 80 40.0
CAN.G241.37 Capsicum annuum HOM05D000888 ORTHO05D000740 4.1e-07 58.5 77 36.4
Lsat_1_v5_gn_1_43600 Lactuca sativa HOM05D000888 ORTHO05D000740 4.1e-07 58.5 78 42.3
Thecc.09G009500 Theobroma cacao HOM05D000888 ORTHO05D000740 4.1e-07 58.5 77 36.4
Cc08_g06160 Coffea canephora HOM05D000888 ORTHO05D000740 5.3e-07 58.2 76 35.5
Sopen08g002450 Solanum pennellii HOM05D000301 ORTHO05D000303 5.3e-07 58.2 64 39.1
EL10Ac2g02424 Beta vulgaris HOM05D000888 ORTHO05D000740 7.0e-07 57.8 78 35.9
AUR62026865 Chenopodium quinoa HOM05D000888 ORTHO05D000740 9.1e-07 57.4 78 38.5
Nitab4.5_0006661g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.2e-06 57.0 80 37.5
PGSC0003DMG400026314 Solanum tuberosum HOM05D000888 ORTHO05D000740 1.5e-06 56.6 64 37.5
CAN.G673.4 Capsicum annuum HOM05D000888 ORTHO05D000740 2.6e-06 55.8 78 33.3
Cc05_g09350 Coffea canephora HOM05D000888 ORTHO05D000740 2.6e-06 55.8 80 35.0
Cc08_g08270 Coffea canephora HOM05D000888 ORTHO05D000740 2.6e-06 55.8 81 35.8
EL10Ac3g05995 Beta vulgaris HOM05D000888 ORTHO05D000740 3.4e-06 55.5 82 40.2
BcaB04g18619 Brassica carinata HOM05D000888 ORTHO05D000740 7.7e-06 54.3 76 38.2
CAN.G241.36 Capsicum annuum HOM05D000888 ORTHO05D000740 7.7e-06 54.3 81 35.8


User provided reference genes

Program Settings