Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 1.7e-66 255.8 122 100.0
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 6.6e-66 253.8 122 99.2
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 5.7e-62 240.7 122 93.4
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 5.7e-62 240.7 122 93.4
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 2.2e-61 238.8 122 94.3
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 2.8e-61 238.4 122 93.4
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 1.2e-56 223.0 122 84.4
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 1.2e-56 223.0 122 84.4
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 1.4e-55 219.5 120 84.2
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 8.9e-55 216.9 118 84.7
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 1.5e-54 216.1 109 93.6
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 1.6e-51 206.1 120 77.5
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 3.0e-50 201.8 120 73.3
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 1.5e-46 189.5 120 70.8
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 4.9e-45 184.5 122 68.9
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 1.2e-43 179.9 124 68.5
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 2.5e-41 172.2 122 64.8
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 3.3e-41 171.8 122 63.9
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 2.8e-40 168.7 122 65.6
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 2.2e-37 159.1 120 59.2
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 4.6e-35 151.4 105 66.7
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 1.7e-34 149.4 117 59.8
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 1.2e-32 143.3 120 55.8
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 2.1e-32 142.5 117 56.4
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 3.6e-32 141.7 127 55.1
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 1.8e-31 139.4 126 51.6
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 2.4e-31 139.0 117 54.7
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 8.9e-31 137.1 122 53.3
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 2.6e-30 135.6 120 55.0
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 3.4e-30 135.2 120 55.0
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 4.4e-30 134.8 120 55.8
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 5.8e-30 134.4 120 54.2
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 9.9e-30 133.7 120 52.5
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.3e-29 133.3 120 53.3
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.9e-29 132.1 120 53.3
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 2.9e-29 132.1 120 50.8
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 2.9e-29 132.1 118 55.9
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.9e-29 132.1 119 52.9
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 6.4e-29 131.0 111 55.0
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 8.4e-29 130.6 126 48.4
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 8.4e-29 130.6 126 48.4
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 8.4e-29 130.6 126 50.0
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 1.1e-28 130.2 120 52.5
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 2.4e-28 129.0 120 52.5
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 3.2e-28 128.6 120 52.5
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 4.2e-28 128.3 111 54.1
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 5.4e-28 127.9 119 51.3
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 9.3e-28 127.1 122 53.3
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 1.2e-27 126.7 127 50.4
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 1.6e-27 126.3 122 53.3
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 2.1e-27 125.9 116 52.6
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 2.1e-27 125.9 116 52.6
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 2.1e-27 125.9 116 52.6
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 2.1e-27 125.9 116 52.6
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 2.1e-27 125.9 120 50.8
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 2.7e-27 125.6 116 52.6
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 2.7e-27 125.6 116 52.6
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 2.7e-27 125.6 116 53.4
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 2.7e-27 125.6 112 52.7
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 2.7e-27 125.6 118 53.4
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 2.7e-27 125.6 120 49.2
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 3.5e-27 125.2 116 52.6
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 3.5e-27 125.2 116 51.7
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 4.6e-27 124.8 120 50.0
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 6.0e-27 124.4 116 51.7
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 6.0e-27 124.4 120 53.3
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 7.8e-27 124.0 116 51.7
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 7.8e-27 124.0 116 51.7
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 7.8e-27 124.0 116 51.7
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 7.8e-27 124.0 120 49.2
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 1.0e-26 123.6 127 45.7
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 1.0e-26 123.6 120 48.3
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 1.3e-26 123.2 116 51.7
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 1.3e-26 123.2 116 51.7
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 1.7e-26 122.9 127 49.6
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 1.7e-26 122.9 116 51.7
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 2.3e-26 122.5 120 50.0
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 3.0e-26 122.1 120 48.3
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 3.0e-26 122.1 116 51.7
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 3.9e-26 121.7 120 48.3
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 3.9e-26 121.7 120 50.0
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 3.9e-26 121.7 120 50.0
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 3.9e-26 121.7 120 50.0
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 6.6e-26 120.9 121 52.1
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 8.7e-26 120.6 116 50.9
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 8.7e-26 120.6 120 47.5
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 1.1e-25 120.2 113 49.6
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 1.5e-25 119.8 120 47.5
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 2.5e-25 119.0 115 48.7
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 2.5e-25 119.0 113 50.4
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 3.3e-25 118.6 120 47.5
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 4.3e-25 118.2 120 50.0
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 1.3e-24 116.7 117 51.3
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 3.6e-24 115.2 122 49.2
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 4.8e-24 114.8 127 44.9
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 6.2e-24 114.4 117 50.4
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 2.4e-23 112.5 115 47.8
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 3.4e-22 108.6 114 47.4
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 9.9e-22 107.1 127 43.3
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 9.3e-20 100.5 112 42.0
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 1.2e-19 100.1 129 39.5
Lj4A21T59 Lonicera japonica HOM05D005168 ORTHO05D006358 6.0e-19 97.8 77 58.4
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 7.9e-19 97.4 125 40.0
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 2.3e-18 95.9 97 45.4
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 3.0e-18 95.5 117 43.6
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.9e-17 92.8 74 59.5
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 9.9e-14 80.5 155 30.3
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.7e-13 79.7 87 48.3
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 2.2e-13 79.3 90 44.4
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 1.1e-12 77.0 121 33.1
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 1.4e-12 76.6 115 33.0
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 2.4e-12 75.9 117 34.2
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 2.4e-12 75.9 53 60.4
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 5.4e-12 74.7 62 53.2
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 1.6e-11 73.2 52 55.8
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 2.1e-11 72.8 80 46.2
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 6.0e-11 71.2 58 53.4
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.3e-10 69.3 82 41.5
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 1.1e-09 67.0 59 45.8
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.5e-09 66.6 45 62.2
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 1.9e-09 66.2 78 43.6
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 3.3e-09 65.5 91 40.7
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 7.4e-09 64.3 71 47.9
Lsat_1_v5_gn_2_14240 Lactuca sativa HOM05D005168 ORTHO05D006358 1.4e-07 60.1 38 63.2
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 1.8e-07 59.7 40 60.0
MCO15G369 Micromonas commoda HOM05D005168 ORTHO05D006358 1.8e-07 59.7 131 28.2
Glyma.08G301902 Glycine max HOM05D005168 ORTHO05D006358 6.9e-07 57.8 84 36.9
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 1.5e-06 56.6 54 44.4
Glyma.06G213500 Glycine max HOM05D005168 ORTHO05D006358 2.0e-06 56.2 66 43.9
MSTRG.17362 Avicennia marina HOM05D006029 ORTHO05D007439 2.6e-06 55.8 119 30.3
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 2.6e-06 55.8 116 33.6
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 3.4e-06 55.5 84 35.7
ECA238G0944 Erigeron canadensis HOM05D005168 ORTHO05D006358 5.8e-06 54.7 66 42.4


User provided reference genes

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