Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.1e-146 522.7 337 100.0
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.4e-110 402.9 373 79.9
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 3.2e-110 402.5 375 79.5
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 4.0e-105 385.6 213 88.7
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 9.8e-104 380.9 374 77.0
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 4.9e-103 378.6 384 75.0
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 6.6e-100 368.2 213 86.4
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 1.3e-95 354.0 213 83.1
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 4.1e-94 349.0 214 79.0
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 5.4e-94 348.6 214 79.0
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 9.2e-94 347.8 213 79.8
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 1.6e-93 347.1 214 79.4
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 4.6e-93 345.5 214 79.4
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 8.6e-92 341.3 214 79.4
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 1.9e-91 340.1 212 78.8
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.3e-91 339.0 213 77.9
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 9.5e-91 337.8 213 77.9
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 1.2e-90 337.4 213 77.5
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 2.1e-90 336.7 213 77.5
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 4.7e-90 335.5 213 77.0
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 1.1e-89 334.3 213 78.9
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 1.4e-89 334.0 190 84.7
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 1.4e-89 334.0 214 77.6
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 1.8e-89 333.6 214 76.6
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.8e-89 333.6 213 77.5
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.3e-89 333.2 214 77.6
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.3e-89 333.2 214 77.6
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 3.1e-89 332.8 213 75.6
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 3.1e-89 332.8 214 77.1
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 5.2e-89 332.0 214 78.5
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 5.2e-89 332.0 214 78.0
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 6.8e-89 331.6 213 77.5
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 6.8e-89 331.6 213 77.5
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 6.8e-89 331.6 213 77.5
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 1.2e-88 330.9 214 78.0
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 1.5e-88 330.5 213 76.1
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 2.6e-88 329.7 213 76.5
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 3.4e-88 329.3 214 77.6
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 4.4e-88 328.9 214 76.6
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 4.4e-88 328.9 214 76.6
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.4e-88 328.9 231 72.3
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 5.8e-88 328.6 188 83.0
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 9.9e-88 327.8 212 75.5
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 9.9e-88 327.8 190 83.7
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 9.9e-88 327.8 213 74.2
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 1.7e-87 327.0 214 76.6
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.2e-87 326.6 213 73.7
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.9e-87 326.2 190 82.6
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 2.9e-87 326.2 190 82.1
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 3.7e-87 325.9 370 70.0
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 3.7e-87 325.9 214 75.7
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 3.7e-87 325.9 190 83.2
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 4.9e-87 325.5 190 82.1
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 4.9e-87 325.5 213 73.2
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 4.9e-87 325.5 379 68.9
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 6.4e-87 325.1 213 76.5
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 6.4e-87 325.1 214 75.2
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 6.4e-87 325.1 190 82.6
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 6.4e-87 325.1 213 75.1
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 8.4e-87 324.7 190 82.1
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 1.1e-86 324.3 191 81.2
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 1.1e-86 324.3 216 75.9
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 1.9e-86 323.6 190 79.5
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.9e-86 323.6 214 75.2
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 2.4e-86 323.2 188 81.9
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 3.2e-86 322.8 190 79.5
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 3.2e-86 322.8 390 58.5
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 3.2e-86 322.8 190 78.9
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 5.4e-86 322.0 213 72.8
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 7.1e-86 321.6 190 78.9
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 7.1e-86 321.6 213 72.8
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 7.1e-86 321.6 213 72.8
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 7.1e-86 321.6 213 72.8
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 7.1e-86 321.6 214 76.2
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 1.2e-85 320.9 190 78.9
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 1.2e-85 320.9 214 75.2
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 2.1e-85 320.1 213 73.2
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 2.7e-85 319.7 213 75.1
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 2.7e-85 319.7 189 80.4
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 2.7e-85 319.7 214 72.4
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 3.5e-85 319.3 214 73.8
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 4.6e-85 318.9 190 77.9
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 4.6e-85 318.9 217 73.7
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 4.6e-85 318.9 207 75.4
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 1.0e-84 317.8 190 77.4
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 3.0e-84 316.2 190 77.4
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 6.6e-84 315.1 213 73.7
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 6.6e-84 315.1 213 73.7
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 1.5e-83 313.9 378 67.5
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.5e-83 313.9 214 73.4
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.9e-83 313.5 227 68.7
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 2.5e-83 313.2 200 75.5
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 4.3e-83 312.4 207 74.4
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 5.6e-83 312.0 190 77.9
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 1.2e-82 310.8 197 74.6
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 1.2e-82 310.8 213 73.2
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 4.7e-82 308.9 190 77.9
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 3.1e-81 306.2 191 77.0
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 3.1e-81 306.2 213 69.5
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 5.2e-81 305.4 213 70.0
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 8.9e-81 304.7 266 62.8
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 1.2e-80 304.3 263 62.7
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 1.5e-80 303.9 211 69.7
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 9.9e-80 301.2 218 67.0
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 9.9e-80 301.2 189 75.7
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 3.8e-79 299.3 190 73.7
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 8.4e-79 298.1 190 73.2
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.1e-78 297.7 177 78.5
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 1.9e-78 297.0 190 75.3
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.7e-77 293.1 200 73.0
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 7.8e-77 291.6 201 70.6
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 3.0e-76 289.7 200 70.5
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 1.3e-71 274.2 178 74.2
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 2.9e-71 273.1 181 77.3
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.2e-70 269.2 346 47.4
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 3.3e-67 259.6 332 48.8
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 3.6e-66 256.1 214 66.4
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 8.1e-66 255.0 190 60.0
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 1.5e-51 207.6 185 51.4
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 2.5e-51 206.8 184 52.7
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 5.3e-49 199.1 223 48.9
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.8e-44 184.1 161 63.4
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 5.1e-44 182.6 97 86.6
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.3e-39 167.9 94 83.0
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 2.0e-35 154.1 118 66.9
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 3.8e-31 139.8 152 52.6
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 4.7e-21 106.3 70 68.6
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 4.7e-21 106.3 70 68.6
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 8.2e-18 95.5 135 45.2
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 4.0e-12 76.6 53 60.4
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 3.4e-11 73.6 77 57.1
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 1.1e-09 68.6 67 52.2
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 6.5e-07 59.3 60 53.3
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 1.9e-06 57.8 42 66.7
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 3.2e-06 57.0 148 27.0
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 5.5e-06 56.2 148 26.4


User provided reference genes

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