Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003227g0010 Nicotiana tabacum HOM05D004082 ORTHO05D004729 0.0e+00 1200.3 564 100.0
PGSC0003DMG401024737 Solanum tuberosum HOM05D004082 ORTHO05D004729 0.0e+00 1117.1 560 93.0
Peaxi162Scf00037g00423 Petunia axillaris HOM05D004082 ORTHO05D004729 0.0e+00 1110.5 560 92.0
Solyc01g099090.3 Solanum lycopersicum HOM05D004082 ORTHO05D004729 0.0e+00 1096.6 561 91.6
Sopen01g042650 Solanum pennellii HOM05D004082 ORTHO05D004729 0.0e+00 1092.4 561 91.8
CAN.G1034.45 Capsicum annuum HOM05D004082 ORTHO05D004729 0.0e+00 1087.8 560 90.7
Nitab4.5_0000137g0200 Nicotiana tabacum HOM05D004082 ORTHO05D004729 1.5e-301 1038.9 512 96.7
vmacro22529 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 8.3e-273 943.3 562 78.6
vmacro05017 Vaccinium macrocarpon HOM05D004082 ORTHO05D004729 5.4e-272 940.6 562 78.6
CSS0005144 Camellia sinensis var. sinensis HOM05D004082 ORTHO05D004729 3.5e-271 937.9 563 77.8
DCAR_022172 Daucus carota HOM05D004082 ORTHO05D004729 4.6e-271 937.6 563 77.1
Potri.013G021200 Populus trichocarpa HOM05D004082 ORTHO05D004729 1.9e-269 932.2 563 76.7
Haze_04194 Corylus avellana HOM05D004082 ORTHO05D004729 2.8e-268 928.3 564 77.3
Dinv40289 Davidia involucrata HOM05D004082 ORTHO05D004729 1.0e-267 926.4 549 79.4
Sabra13G0023600 Salix brachista HOM05D004082 ORTHO05D004729 1.4e-267 926.0 563 76.6
GSVIVG01000073001 Vitis vinifera HOM05D004082 ORTHO05D004729 1.2e-266 922.9 562 76.7
MD12G1218800 Malus domestica HOM05D004082 ORTHO05D004729 1.5e-266 922.5 565 77.9
Duzib106G1815 Durio zibethinus HOM05D004082 ORTHO05D004729 9.8e-266 919.8 565 76.8
CiPaw.07G018100 Carya illinoinensis HOM05D004082 ORTHO05D004729 6.4e-265 917.1 563 76.6
Thecc.05G302900 Theobroma cacao HOM05D004082 ORTHO05D004729 6.4e-265 917.1 564 76.6
Manes.08G120500 Manihot esculenta HOM05D004082 ORTHO05D004729 4.1e-264 914.4 563 75.5
Cc02_g33390 Coffea canephora HOM05D004082 ORTHO05D004729 7.0e-264 913.7 565 76.1
Lj5C472G3 Lonicera japonica HOM05D004082 ORTHO05D004729 7.0e-264 913.7 561 76.8
Nn1g02247 Nelumbo nucifera HOM05D004082 ORTHO05D004729 1.2e-263 912.9 563 75.1
Duzib177G1172 Durio zibethinus HOM05D004082 ORTHO05D004729 1.6e-263 912.5 564 76.2
Lj5g0001168 Lotus japonicus HOM05D004082 ORTHO05D004729 2.0e-263 912.1 556 77.3
Lj5C530G2 Lonicera japonica HOM05D004082 ORTHO05D004729 2.7e-263 911.8 561 76.3
TAR636G3250 Trochodendron aralioides HOM05D004082 ORTHO05D004729 2.3e-262 908.7 563 75.0
Oeu038297.1 Olea europaea HOM05D004082 ORTHO05D004729 3.9e-262 907.9 566 76.9
QL03p007071 Quercus lobata HOM05D004082 ORTHO05D004729 3.9e-262 907.9 563 75.8
MSTRG.27997 Avicennia marina HOM05D004082 ORTHO05D004729 6.6e-262 907.1 562 74.9
Prupe.6G325300 Prunus persica HOM05D004082 ORTHO05D004729 8.6e-262 906.7 564 75.5
Ciclev10000150m.g Citrus clementina HOM05D004082 ORTHO05D004729 1.1e-261 906.4 563 75.5
Gohir.A13G107600 Gossypium hirsutum HOM05D004082 ORTHO05D004729 1.9e-261 905.6 565 75.6
FAN05G3196 Fragaria x ananassa HOM05D004082 ORTHO05D004729 4.3e-261 904.4 562 76.0
Gorai.013G124100 Gossypium raimondii HOM05D004082 ORTHO05D004729 9.5e-261 903.3 565 75.6
Gohir.D13G110800 Gossypium hirsutum HOM05D004082 ORTHO05D004729 1.2e-260 902.9 565 75.4
Cpa.g.sc48.57 Carica papaya HOM05D004082 ORTHO05D004729 2.1e-260 902.1 563 75.3
DCAR_003333 Daucus carota HOM05D004082 ORTHO05D004729 2.1e-260 902.1 562 74.0
FAN09G0543 Fragaria x ananassa HOM05D004082 ORTHO05D004729 4.7e-260 901.0 562 75.8
FAN05G5148 Fragaria x ananassa HOM05D004082 ORTHO05D004729 1.4e-259 899.4 562 75.8
TWI56G0720 Tripterygium wilfordii HOM05D004082 ORTHO05D004729 2.3e-259 898.7 565 74.3
RcHm_v2.0_Chr3g0454891 Rosa chinensis HOM05D004082 ORTHO05D004729 3.1e-259 898.3 564 74.5
PGR031G3794 Punica granatum HOM05D004082 ORTHO05D004729 8.9e-259 896.7 569 75.6
CANSAT54G2367 Cannabis sativa HOM05D004082 ORTHO05D004729 1.7e-257 892.5 566 74.7
ECA236G4884 Erigeron canadensis HOM05D004082 ORTHO05D004729 2.2e-257 892.1 563 74.6
FvH4_6g05900 Fragaria vesca HOM05D004082 ORTHO05D004729 3.7e-257 891.3 563 75.1
TPR.G6044 Trifolium pratense HOM05D004082 ORTHO05D004729 1.1e-256 889.8 561 73.6
HanXRQChr02g0046191 Helianthus annuus HOM05D004082 ORTHO05D004729 1.4e-256 889.4 564 73.9
Psat6g151160 Pisum sativum HOM05D004082 ORTHO05D004729 7.1e-256 887.1 561 74.2
RhsimUnG0226200 Rhododendron simsii HOM05D004082 ORTHO05D004729 9.2e-256 886.7 580 73.6
Prupe.6G325400 Prunus persica HOM05D004082 ORTHO05D004729 2.1e-255 885.6 564 74.5
Sc16g0008480 Simmondsia chinensis HOM05D004082 ORTHO05D004729 3.5e-255 884.8 565 73.8
Glyma.20G233900 Glycine max HOM05D004082 ORTHO05D004729 2.5e-253 878.6 564 73.9
Ca_10110_v3 Cicer arietinum L. HOM05D004082 ORTHO05D004729 9.5e-253 876.7 563 73.5
Migut.O00505 Erythranthe guttata HOM05D004082 ORTHO05D004729 3.6e-252 874.8 563 74.1
Medtr1g082890 Medicago truncatula HOM05D004082 ORTHO05D004729 5.2e-251 870.9 563 73.4
FAN14G3006 Fragaria x ananassa HOM05D004082 ORTHO05D004729 2.0e-250 869.0 545 76.0
Gorai.007G297200 Gossypium raimondii HOM05D004082 ORTHO05D004729 3.4e-250 868.2 563 73.2
VMungo0720G1572 Vigna mungo HOM05D004082 ORTHO05D004729 4.4e-250 867.8 556 73.9
Gohir.D11G275400 Gossypium hirsutum HOM05D004082 ORTHO05D004729 5.8e-250 867.5 563 73.2
Phvul.007G180100 Phaseolus vulgaris HOM05D004082 ORTHO05D004729 1.7e-249 865.9 556 74.1
Ah.06g189390 Amaranthus hybridus HOM05D004082 ORTHO05D004729 3.8e-249 864.8 558 72.9
Eucgr.H04490 Eucalyptus grandis HOM05D004082 ORTHO05D004729 3.8e-249 864.8 574 72.0
Glyma.10G154400 Glycine max HOM05D004082 ORTHO05D004729 3.8e-249 864.8 564 72.5
SGA_v2.0_scaffold81G26069 Striga asiatica HOM05D004082 ORTHO05D004729 3.8e-249 864.8 563 71.6
Gohir.A11G265200 Gossypium hirsutum HOM05D004082 ORTHO05D004729 6.4e-249 864.0 557 72.9
Migut.N02007 Erythranthe guttata HOM05D004082 ORTHO05D004729 1.9e-248 862.4 562 73.3
Aqoxy5G00500 Aquilegia oxysepala HOM05D004082 ORTHO05D004729 5.4e-248 860.9 563 73.0
Lalb_Chr02g0148261 Lupinus albus HOM05D004082 ORTHO05D004729 5.4e-248 860.9 562 72.2
MD12G1218900 Malus domestica HOM05D004082 ORTHO05D004729 5.4e-248 860.9 564 71.5
SalBow3G1583 Salvia bowleyana HOM05D004082 ORTHO05D004729 5.4e-248 860.9 563 73.0
EL10Ac4g09354 Beta vulgaris HOM05D004082 ORTHO05D004729 6.6e-246 854.0 561 72.2
VMungo0540G1737 Vigna mungo HOM05D004082 ORTHO05D004729 6.6e-246 854.0 563 72.6
arahy.Tifrunner.gnm1.ann1.DUKX6J Arachis hypogaea HOM05D004082 ORTHO05D004729 8.6e-246 853.6 569 71.0
arahy.Tifrunner.gnm1.ann1.MMBS5J Arachis hypogaea HOM05D004082 ORTHO05D004729 1.1e-245 853.2 564 70.6
Phvul.006G092100 Phaseolus vulgaris HOM05D004082 ORTHO05D004729 1.5e-245 852.8 563 72.3
Glyma.19G235500 Glycine max HOM05D004082 ORTHO05D004729 1.9e-245 852.4 559 72.1
Hund07072 Selenicereus undatus HOM05D004082 ORTHO05D004729 3.3e-245 851.7 565 71.3
Medtr7g113570 Medicago truncatula HOM05D004082 ORTHO05D004729 2.1e-244 849.0 556 72.3
Lj1g0013013 Lotus japonicus HOM05D004082 ORTHO05D004729 8.1e-244 847.0 566 70.3
Psat3g011080 Pisum sativum HOM05D004082 ORTHO05D004729 8.1e-244 847.0 570 72.5
arahy.Tifrunner.gnm1.ann1.0R76NZ Arachis hypogaea HOM05D004082 ORTHO05D004729 3.1e-243 845.1 564 70.0
Sed0016495 Sechium edule HOM05D004082 ORTHO05D004729 9.0e-243 843.6 564 69.7
arahy.Tifrunner.gnm1.ann1.7P2G6T Arachis hypogaea HOM05D004082 ORTHO05D004729 1.5e-242 842.8 569 70.3
TWI56G1006 Tripterygium wilfordii HOM05D004082 ORTHO05D004729 2.6e-242 842.0 566 70.0
Hund21813 Selenicereus undatus HOM05D004082 ORTHO05D004729 3.4e-242 841.6 572 69.9
AUR62000827 Chenopodium quinoa HOM05D004082 ORTHO05D004729 7.6e-242 840.5 562 70.8
Lalb_Chr18g0045631 Lupinus albus HOM05D004082 ORTHO05D004729 1.7e-241 839.3 563 71.6
Ca_09358_v3 Cicer arietinum L. HOM05D004082 ORTHO05D004729 2.9e-241 838.6 563 71.0
TPR.G33180 Trifolium pratense HOM05D004082 ORTHO05D004729 4.9e-241 837.8 569 71.4
Glyma.03G238100 Glycine max HOM05D004082 ORTHO05D004729 5.4e-240 834.3 566 70.5
COL.COLO4_13463 Corchorus olitorius HOM05D004082 ORTHO05D004729 1.6e-239 832.8 559 71.7
CsaV3_1G038970 Cucumis sativus L. HOM05D004082 ORTHO05D004729 2.7e-239 832.0 563 69.6
MELO3C015324.2 Cucumis melo HOM05D004082 ORTHO05D004729 3.5e-239 831.6 559 69.8
Lsat_1_v5_gn_9_86081 Lactuca sativa HOM05D004082 ORTHO05D004729 1.5e-237 826.2 569 69.9
PSO832G1048 Papaver somniferum HOM05D004082 ORTHO05D004729 3.3e-237 825.1 562 70.1
CDE05G1313 Ceratophyllum demersum HOM05D004082 ORTHO05D004729 9.6e-237 823.5 557 70.2
Migut.B01033 Erythranthe guttata HOM05D004082 ORTHO05D004729 8.4e-233 810.4 562 67.3
ClCG03G016970 Citrullus lanatus HOM05D004082 ORTHO05D004729 2.4e-232 808.9 569 67.7
Os05g0391500 Oryza sativa ssp. japonica HOM05D004082 ORTHO05D004729 1.3e-230 803.1 568 68.1
Aqoxy2G03354 Aquilegia oxysepala HOM05D004082 ORTHO05D004729 2.5e-229 798.9 562 65.8
AUR62005147 Chenopodium quinoa HOM05D004082 ORTHO05D004729 1.1e-227 793.5 562 67.6
HPP92_001021 Vanilla planifolia HOM05D004082 ORTHO05D004729 4.0e-227 791.6 557 67.7
Lj9A80G16 Lonicera japonica HOM05D004082 ORTHO05D004729 1.5e-226 789.6 519 74.4
Zm00001eb287240 Zea mays HOM05D004082 ORTHO05D004729 1.7e-225 786.2 568 66.5
THA.LOC104805875 Tarenaya hassleriana HOM05D004082 ORTHO05D004729 1.2e-223 780.0 568 66.9
Sp1g07620 Schrenkiella parvula HOM05D004082 ORTHO05D004729 3.9e-222 775.0 565 66.9
AL1G19440 Arabidopsis lyrata HOM05D004082 ORTHO05D004729 6.7e-222 774.2 559 67.1
Aa31sc136G30 Aethionema arabicum HOM05D004082 ORTHO05D004729 1.1e-221 773.5 566 65.5
AT1G09010 Arabidopsis thaliana HOM05D004082 ORTHO05D004729 4.3e-221 771.5 559 67.4
Carub.0001s0833 Capsella rubella HOM05D004082 ORTHO05D004729 4.3e-221 771.5 565 66.2
C05p07040 Brassica napus HOM05D004082 ORTHO05D004729 7.4e-221 770.8 562 67.3
BolC5t29459H Brassica oleracea HOM05D004082 ORTHO05D004729 7.4e-221 770.8 562 67.3
BcaB07g34118 Brassica carinata HOM05D004082 ORTHO05D004729 1.3e-220 770.0 562 66.9
A06p05830 Brassica napus HOM05D004082 ORTHO05D004729 6.2e-220 767.7 565 66.4
unitig_52.g17387 Utricularia gibba HOM05D004082 ORTHO05D004729 1.4e-219 766.5 559 67.1
BraA06t23793Z Brassica rapa HOM05D004082 ORTHO05D004729 1.8e-219 766.1 565 66.2
CARHR008900 Cardamine hirsuta HOM05D004082 ORTHO05D004729 2.2e-217 759.2 565 65.0
A08p34860 Brassica napus HOM05D004082 ORTHO05D004729 4.6e-215 751.5 562 64.9
BraA08t35397Z Brassica rapa HOM05D004082 ORTHO05D004729 4.6e-215 751.5 562 64.8
C08p12400 Brassica napus HOM05D004082 ORTHO05D004729 6.3e-212 741.1 562 64.2
BolC8t48880H Brassica oleracea HOM05D004082 ORTHO05D004729 6.3e-212 741.1 562 64.2
SHI18140 Sapria himalayana HOM05D004082 ORTHO05D004729 8.5e-209 730.7 592 60.0
Thhalv10006730m.g Eutrema salsugineum HOM05D004082 ORTHO05D004729 3.6e-207 725.3 565 64.1
BcaC07g38465 Brassica carinata HOM05D004082 ORTHO05D004729 8.2e-204 714.1 562 63.9
BcaC05g24752 Brassica carinata HOM05D004082 ORTHO05D004729 2.0e-197 693.0 564 62.8
BcaC07g38468 Brassica carinata HOM05D004082 ORTHO05D004729 1.8e-187 659.8 562 59.1
arahy.Tifrunner.gnm1.ann1.HF1TD9 Arachis hypogaea HOM05D004082 ORTHO05D004729 2.4e-179 632.9 357 80.4
Mapoly0034s0073 Marchantia polymorpha HOM05D004082 ORTHO05D004729 2.6e-157 559.7 558 51.1
CAN.G623.33 Capsicum annuum HOM05D004082 ORTHO05D004729 1.7e-156 557.0 372 76.1
AagrBONN_evm.TU.Sc2ySwM_368.1060 Anthoceros agrestis HOM05D004082 ORTHO05D004729 4.4e-149 532.3 560 49.3
SMO367G0677 Selaginella moellendorffii HOM05D004082 ORTHO05D004729 3.5e-146 522.7 556 49.8
ATR0626G266 Amborella trichopoda HOM05D004082 ORTHO05D004729 4.9e-140 502.3 377 64.5
Pp3c8_17060 Physcomitrium patens HOM05D004082 ORTHO05D004729 7.3e-136 488.4 556 48.7
Pp3c15_10050 Physcomitrium patens HOM05D004082 ORTHO05D004729 4.3e-128 462.6 556 46.8
Atru.chr1.88 Acer truncatum HOM05D004082 ORTHO05D004729 2.4e-126 456.8 410 57.6
CBR_g23107 Chara braunii HOM05D004082 ORTHO05D004729 2.5e-120 436.8 403 53.3
CAN.G22.21 Capsicum annuum HOM05D004082 ORTHO05D004729 2.8e-55 220.7 148 75.0
Atru.chr2.403 Acer truncatum HOM05D004082 ORTHO05D004729 1.6e-45 188.3 147 60.5
CAN.G623.34 Capsicum annuum HOM05D004082 ORTHO05D004729 8.3e-39 166.0 86 83.7
QL03p006635 Quercus lobata HOM05D004082 ORTHO05D004729 2.7e-37 161.0 103 71.8
QL03p006592 Quercus lobata HOM05D004082 ORTHO05D004729 4.6e-37 160.2 103 71.8
Hund21239 Selenicereus undatus HOM05D004082 ORTHO05D004729 9.5e-35 152.5 164 47.0
SGA_v2.0_scaffold54G19617 Striga asiatica HOM05D004082 ORTHO05D004729 1.6e-34 151.8 149 53.7
PRCOL_00002375 Prasinoderma coloniale HOM05D004082 ORTHO05D004729 3.7e-31 140.6 314 30.3
QL03p006553 Quercus lobata HOM05D004082 ORTHO05D004729 5.4e-30 136.7 255 38.0
ATR0626G076 Amborella trichopoda HOM05D004082 ORTHO05D004729 9.2e-30 136.0 98 65.3
QL03p073950 Quercus lobata HOM05D004082 ORTHO05D004729 9.2e-22 109.4 118 49.2
SGA_v2.0_scaffold54G19618 Striga asiatica HOM05D004082 ORTHO05D004729 1.1e-17 95.9 127 42.5
Cfa025543 Carpinus fangiana HOM05D004082 ORTHO05D004729 6.0e-13 80.1 270 27.8
Atru.chr2.402 Acer truncatum HOM05D004082 ORTHO05D004729 1.1e-09 69.3 40 80.0
CSS0034197 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 2.6e-08 64.7 78 43.6


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