Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003216g0020 Nicotiana tabacum HOM05D006539 ORTHO05D008694 1.4e-173 612.8 307 100.0
Nitab4.5_0008573g0030 Nicotiana tabacum HOM05D006539 ORTHO05D008694 7.2e-146 520.8 347 81.0
Solyc02g088540.3 Solanum lycopersicum HOM05D006539 ORTHO05D008694 9.2e-117 424.1 372 63.7
Sopen02g033260 Solanum pennellii HOM05D006539 ORTHO05D008694 1.3e-115 420.2 372 63.4
Peaxi162Scf00166g00943 Petunia axillaris HOM05D006539 ORTHO05D008694 5.8e-111 404.8 364 62.9
CAN.G206.194 Capsicum annuum HOM05D006539 ORTHO05D008694 2.2e-110 402.9 374 62.3
PGSC0003DMG400001350 Solanum tuberosum HOM05D006539 ORTHO05D008694 3.8e-86 322.4 293 60.8
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.3e-83 313.2 385 49.6
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 2.8e-81 306.2 385 49.1
Rhsim10G0046900 Rhododendron simsii HOM05D006539 ORTHO05D008694 4.0e-80 302.4 386 48.7
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 3.8e-78 295.8 377 49.3
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 3.8e-78 295.8 331 54.4
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 1.2e-76 290.8 376 49.2
Oeu000853.1 Olea europaea HOM05D006539 ORTHO05D008694 1.2e-76 290.8 370 49.7
Eucgr.I01991 Eucalyptus grandis HOM05D006539 ORTHO05D008694 2.7e-76 289.7 375 49.3
Migut.H00658 Erythranthe guttata HOM05D006539 ORTHO05D008694 3.9e-75 285.8 376 47.6
Nn4g23332 Nelumbo nucifera HOM05D006539 ORTHO05D008694 6.7e-75 285.0 380 48.2
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 4.3e-74 282.3 376 49.2
MSTRG.23905 Avicennia marina HOM05D006539 ORTHO05D008694 1.6e-73 280.4 379 45.1
RcHm_v2.0_Chr2g0166661 Rosa chinensis HOM05D006539 ORTHO05D008694 2.1e-73 280.0 375 47.7
SalBow1G8487 Salvia bowleyana HOM05D006539 ORTHO05D008694 6.3e-73 278.5 380 46.3
Manes.02G050600 Manihot esculenta HOM05D006539 ORTHO05D008694 1.1e-72 277.7 381 49.1
vmacro05668 Vaccinium macrocarpon HOM05D006539 ORTHO05D008694 9.0e-72 274.6 386 47.9
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 2.2e-70 270.0 378 45.0
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 6.5e-70 268.5 397 47.1
FAN05G4473 Fragaria x ananassa HOM05D006539 ORTHO05D008694 8.5e-70 268.1 372 46.2
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 1.9e-69 266.9 379 47.5
TWI32G0765 Tripterygium wilfordii HOM05D006539 ORTHO05D008694 2.5e-69 266.5 373 47.7
MD17G1055800 Malus domestica HOM05D006539 ORTHO05D008694 3.2e-69 266.2 375 46.7
DCAR_011065 Daucus carota HOM05D006539 ORTHO05D008694 4.2e-69 265.8 366 48.1
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 4.2e-69 265.8 365 46.3
Haze_14476 Corylus avellana HOM05D003516 ORTHO05D004068 7.2e-69 265.0 324 51.9
Aqoxy3G00450 Aquilegia oxysepala HOM05D006539 ORTHO05D008694 9.3e-69 264.6 380 46.3
CANSAT64G0188 Cannabis sativa HOM05D006539 ORTHO05D008694 2.1e-68 263.5 382 48.4
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.1e-68 263.5 371 46.1
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 2.7e-68 263.1 367 47.1
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 4.6e-68 262.3 372 45.7
GSVIVG01011483001 Vitis vinifera HOM05D006539 ORTHO05D008694 6.1e-68 261.9 385 44.9
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 1.8e-67 260.4 367 46.0
PSO478G0472 Papaver somniferum HOM05D006539 ORTHO05D008694 1.1e-66 257.7 377 44.3
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 2.5e-66 256.5 377 47.2
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 3.3e-66 256.1 371 45.8
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 3.3e-66 256.1 282 52.5
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 3.3e-66 256.1 367 46.3
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 4.3e-66 255.8 377 47.2
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 5.7e-66 255.4 317 47.3
Potri.004G122300 Populus trichocarpa HOM05D006539 ORTHO05D008694 5.7e-66 255.4 381 44.1
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 7.4e-66 255.0 368 44.6
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 9.7e-66 254.6 368 46.2
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 1.6e-65 253.8 363 45.5
SGA_v2.0_scaffold4G02416 Striga asiatica HOM05D006539 ORTHO05D008694 2.2e-65 253.4 369 44.2
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 4.8e-65 252.3 317 48.9
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 8.2e-65 251.5 315 48.3
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 1.8e-64 250.4 366 45.1
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 1.8e-64 250.4 282 50.4
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 1.8e-64 250.4 366 45.4
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 3.1e-64 249.6 366 46.2
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 4.1e-64 249.2 373 44.0
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 9.1e-64 248.1 303 50.2
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 2.9e-62 243.0 367 43.9
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 2.9e-62 243.0 367 45.0
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 3.8e-62 242.7 367 43.6
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 1.4e-61 240.7 370 43.0
AUR62018139 Chenopodium quinoa HOM05D006539 ORTHO05D008694 4.2e-61 239.2 263 52.5
Ciclev10013894m.g Citrus clementina HOM05D006539 ORTHO05D008694 9.4e-61 238.0 286 50.3
TPR.G33480 Trifolium pratense HOM05D006539 ORTHO05D008694 1.2e-60 237.7 282 48.6
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.6e-60 237.3 346 46.5
FvH4_6g47560 Fragaria vesca HOM05D006539 ORTHO05D008694 2.1e-60 236.9 261 52.5
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.7e-60 236.5 252 53.6
Medtr7g012240 Medicago truncatula HOM05D006539 ORTHO05D008694 4.6e-60 235.7 269 49.4
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 6.1e-60 235.3 367 43.6
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 6.1e-60 235.3 303 48.2
Hund15564 Selenicereus undatus HOM05D006539 ORTHO05D008694 1.4e-59 234.2 249 54.2
Lalb_Chr10g0093241 Lupinus albus HOM05D006539 ORTHO05D008694 2.3e-59 233.4 379 42.2
arahy.Tifrunner.gnm1.ann1.54MYG6 Arachis hypogaea HOM05D006539 ORTHO05D008694 3.0e-59 233.0 312 45.2
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 3.0e-59 233.0 379 42.0
ATR0111G028 Amborella trichopoda HOM05D006539 ORTHO05D008694 1.5e-58 230.7 296 45.6
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 1.5e-58 230.7 277 48.7
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 1.5e-58 230.7 277 49.5
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 2.0e-58 230.3 379 43.5
Ca_06802_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 4.8e-57 225.7 365 41.9
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 6.3e-57 225.3 277 48.0
FAN09G1445 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.5e-55 220.7 345 43.5
Psat3g198480 Pisum sativum HOM05D006539 ORTHO05D008694 7.7e-55 218.4 396 38.9
Os07g0598100 Oryza sativa ssp. japonica HOM05D006539 ORTHO05D008694 1.3e-54 217.6 294 47.6
Dinv33805 Davidia involucrata HOM05D006539 ORTHO05D008694 1.7e-54 217.2 273 49.8
unitig_899.g15160 Utricularia gibba HOM05D006539 ORTHO05D008694 2.9e-54 216.5 319 44.2
Lj1g0006679 Lotus japonicus HOM05D006539 ORTHO05D008694 6.5e-54 215.3 274 46.7
Zm00001eb326670 Zea mays HOM05D006539 ORTHO05D008694 6.5e-54 215.3 296 44.9
CSS0042966 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 3.2e-53 213.0 274 48.9
CSS0047989 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D008694 3.2e-53 213.0 274 48.9
HPP92_013411 Vanilla planifolia HOM05D006539 ORTHO05D008694 3.2e-53 213.0 277 46.6
AUR62034477 Chenopodium quinoa HOM05D006539 ORTHO05D008694 3.9e-51 206.1 410 36.6
SEGI_40704 Sequoiadendron giganteum HOM05D006539 ORTHO05D008694 2.3e-43 180.3 284 39.8
HPP92_006554 Vanilla planifolia HOM05D006539 ORTHO05D008694 2.6e-42 176.8 201 49.8
MELO3C009837.2 Cucumis melo HOM05D006539 ORTHO05D008694 4.8e-41 172.6 369 37.7
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 6.1e-36 155.6 235 39.6
Mapoly0088s0068 Marchantia polymorpha HOM05D006539 ORTHO05D008694 3.0e-35 153.3 245 38.0
Pp3c12_19160 Physcomitrium patens HOM05D006539 ORTHO05D008694 3.7e-33 146.4 302 33.1
SMO228G0204 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 2.4e-32 143.7 237 35.0
HPP92_013415 Vanilla planifolia HOM05D006539 ORTHO05D008694 2.2e-30 137.1 187 43.9
AUR62044515 Chenopodium quinoa HOM05D006539 ORTHO05D008694 4.2e-29 132.9 80 71.2
arahy.Tifrunner.gnm1.ann1.B86ER2 Arachis hypogaea HOM05D006539 ORTHO05D009236 5.5e-29 132.5 230 39.6
Ca_06844_v3 Cicer arietinum L. HOM05D006539 ORTHO05D008694 5.7e-26 122.5 173 43.9
CBR_g38172 Chara braunii HOM05D006539 ORTHO05D008694 3.7e-25 119.8 281 31.3
Pp3c3_25470 Physcomitrium patens HOM05D006539 ORTHO05D008694 8.3e-25 118.6 223 31.8
SMO116G0014 Selaginella moellendorffii HOM05D006539 ORTHO05D008694 8.3e-25 118.6 182 36.3
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.0e-19 101.7 257 24.5
PRCOL_00002708 Prasinoderma coloniale HOM05D006539 ORTHO05D008694 1.2e-18 98.2 191 30.9
FAN02G0136 Fragaria x ananassa HOM05D006539 ORTHO05D008694 1.5e-18 97.8 85 57.6
MD07G1179900 Malus domestica HOM05D006539 ORTHO05D008694 1.2e-12 78.2 206 35.9
MCO16G092 Micromonas commoda HOM05D006539 ORTHO05D008694 4.0e-11 73.2 167 29.9
MD11G1144500 Malus domestica HOM05D006539 ORTHO05D008694 2.0e-10 70.9 155 35.5
CSS0026858 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 4.4e-10 69.7 49 73.5
CSS0050509 Camellia sinensis var. sinensis HOM05D006539 ORTHO05D043354 4.4e-10 69.7 49 73.5
HPP92_013416 Vanilla planifolia HOM05D006539 ORTHO05D008694 9.8e-10 68.6 103 44.7
Ciclev10013255m.g Citrus clementina HOM05D006539 ORTHO05D008694 4.9e-09 66.2 38 81.6
MD07G1180000 Malus domestica HOM05D006539 ORTHO05D248072 4.9e-09 66.2 35 77.1
QL02p073352 Quercus lobata HOM05D006539 ORTHO05D008694 4.6e-07 59.7 37 73.0
QL02p073354 Quercus lobata HOM05D006539 ORTHO05D008694 1.3e-06 58.2 108 41.7


User provided reference genes

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