Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 1.2e-76 289.7 134 100.0
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 3.4e-47 191.8 130 72.3
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 4.4e-39 164.9 146 56.8
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 8.0e-33 144.1 123 57.7
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 1.5e-31 139.8 130 53.1
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 2.6e-31 139.0 124 55.6
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 3.4e-31 138.7 129 48.8
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 5.8e-31 137.9 127 55.9
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 5.8e-31 137.9 127 55.9
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 1.3e-30 136.7 128 49.2
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 3.7e-30 135.2 132 50.8
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 6.4e-30 134.4 127 48.0
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.1e-29 133.7 127 54.3
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 1.1e-29 133.7 127 54.3
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.4e-29 132.5 132 47.7
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 4.1e-29 131.7 132 47.7
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.1e-29 131.7 132 47.7
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 5.4e-29 131.3 122 54.1
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 7.0e-29 131.0 126 46.8
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 9.2e-29 130.6 130 47.7
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 2.7e-28 129.0 129 49.6
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 3.5e-28 128.6 126 47.6
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 4.6e-28 128.3 114 52.6
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 4.6e-28 128.3 127 48.8
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 7.8e-28 127.5 127 44.9
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 1.3e-27 126.7 130 47.7
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 1.7e-27 126.3 122 50.0
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.3e-27 125.9 133 46.6
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 3.0e-27 125.6 123 48.8
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 3.0e-27 125.6 121 52.9
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 3.9e-27 125.2 133 46.6
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 3.9e-27 125.2 134 46.3
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 5.0e-27 124.8 132 44.7
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.9e-26 122.9 124 47.6
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 2.5e-26 122.5 129 44.2
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 2.1e-25 119.4 126 42.1
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.8e-25 119.0 133 44.4
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 6.2e-25 117.9 128 45.3
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 8.1e-25 117.5 134 44.0
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.4e-24 116.7 134 44.8
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-24 116.7 128 43.8
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.4e-24 116.7 127 44.1
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 1.8e-24 116.3 129 41.1
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 1.8e-24 116.3 119 47.9
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 2.3e-24 115.9 127 45.7
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 2.3e-24 115.9 127 43.3
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 2.3e-24 115.9 129 45.0
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 3.1e-24 115.5 134 44.0
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 3.1e-24 115.5 124 49.2
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 3.1e-24 115.5 129 44.2
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 4.0e-24 115.2 129 41.1
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 4.0e-24 115.2 128 43.0
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 4.0e-24 115.2 129 45.0
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 4.0e-24 115.2 129 45.0
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 5.2e-24 114.8 124 48.4
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 6.8e-24 114.4 130 43.1
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 6.8e-24 114.4 126 40.5
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 8.9e-24 114.0 126 46.0
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 2.0e-23 112.8 127 45.7
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 3.4e-23 112.1 130 45.4
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 4.4e-23 111.7 136 43.4
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 7.5e-23 110.9 118 46.6
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 7.5e-23 110.9 134 45.5
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 7.5e-23 110.9 130 46.9
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 9.8e-23 110.5 131 43.5
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 1.3e-22 110.2 124 46.0
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.2e-22 109.4 127 44.9
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 2.9e-22 109.0 115 44.3
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 3.7e-22 108.6 133 42.9
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 3.7e-22 108.6 132 42.4
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 6.4e-22 107.8 130 40.8
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 6.4e-22 107.8 92 59.8
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 1.4e-21 106.7 126 38.1
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 1.4e-21 106.7 112 46.4
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 4.1e-21 105.1 130 44.6
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 7.1e-21 104.4 125 38.4
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 9.2e-21 104.0 119 46.2
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 1.2e-20 103.6 130 43.1
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.6e-20 103.2 117 43.6
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 2.7e-20 102.4 127 42.5
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 4.6e-20 101.7 120 43.3
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 7.8e-20 100.9 130 40.8
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 1.0e-19 100.5 120 45.8
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 1.0e-19 100.5 125 39.2
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.3e-19 100.1 100 47.0
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 1.3e-19 100.1 130 40.8
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 3.0e-19 99.0 134 39.6
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 5.1e-19 98.2 127 41.7
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 5.1e-19 98.2 129 40.3
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 6.6e-19 97.8 129 35.7
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 8.6e-19 97.4 126 40.5
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 8.6e-19 97.4 92 51.1
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 1.5e-18 96.7 122 42.6
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 1.9e-18 96.3 135 34.8
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 2.5e-18 95.9 130 37.7
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 3.3e-18 95.5 128 36.7
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 4.3e-18 95.1 130 40.8
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 5.6e-18 94.7 107 43.0
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 1.6e-17 93.2 113 43.4
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 1.6e-17 93.2 134 34.3
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 2.1e-17 92.8 122 41.8
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 2.8e-17 92.4 106 47.2
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.6e-17 92.0 122 41.0
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 4.7e-17 91.7 92 47.8
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 6.2e-17 91.3 134 38.1
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 8.1e-17 90.9 132 43.2
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 1.4e-16 90.1 130 40.0
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 1.4e-16 90.1 113 41.6
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 1.8e-16 89.7 117 40.2
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.6e-15 85.9 119 42.0
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.6e-15 85.9 119 42.0
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 3.4e-15 85.5 101 49.5
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 4.4e-15 85.1 115 39.1
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 7.6e-15 84.3 131 41.2
Peaxi162Scf00104g00047 Petunia axillaris HOM05D000462 ORTHO05D005846 9.9e-15 84.0 109 44.0
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 1.3e-14 83.6 129 38.0
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.7e-14 83.2 131 39.7
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 1.7e-14 83.2 137 35.0
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 4.9e-14 81.6 94 41.5
SalBow4G0706 Salvia bowleyana HOM05D009568 ORTHO05D011026 6.4e-14 81.3 124 37.9
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 8.4e-14 80.9 133 38.3
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 1.4e-13 80.1 108 39.8
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.9e-13 79.7 105 39.0
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.4e-13 79.3 131 38.2
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 2.4e-13 79.3 99 41.4
Peaxi162Scf01016g00003 Petunia axillaris HOM05D000462 ORTHO05D005846 3.2e-13 79.0 100 44.0
Nitab4.5_0006031g0060 Nicotiana tabacum HOM05D010896 ORTHO05D011162 4.1e-13 78.6 80 42.5
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 1.6e-12 76.6 135 37.0
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.1e-12 76.3 135 37.0
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 2.7e-12 75.9 93 39.8
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.7e-12 75.9 108 38.0
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 3.5e-12 75.5 99 37.4
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 4.6e-12 75.1 77 46.8
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 1.0e-11 73.9 121 35.5
Nitab4.5_0000216g0220 Nicotiana tabacum HOM05D010896 ORTHO05D011162 5.1e-11 71.6 79 41.8
TPR.G34039 Trifolium pratense HOM05D000462 ORTHO05D005846 5.1e-11 71.6 85 38.8
Nitab4.5_0002937g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 6.6e-11 71.2 94 39.4
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-10 70.1 61 54.1
SGA_v2.0_scaffold98G29378 Striga asiatica HOM05D000462 ORTHO05D005846 3.3e-10 68.9 112 33.0
Nitab4.5_0015349g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 7.3e-10 67.8 79 39.2
Nitab4.5_0005799g0040 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.2e-09 67.0 92 37.0
SalBow6G3582 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.1e-09 66.2 141 32.6
Solyc01g060370.2 Solanum lycopersicum HOM05D000462 ORTHO05D005846 6.2e-09 64.7 56 53.6
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 8.1e-09 64.3 75 41.3
Nitab4.5_0003145g0040 Nicotiana tabacum HOM05D008575 ORTHO05D011162 1.1e-08 63.9 107 33.6
Nitab4.5_0004837g0030 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.8e-08 63.2 77 40.3
Nitab4.5_0003057g0010 Nicotiana tabacum HOM05D008575 ORTHO05D011162 4.0e-08 62.0 111 31.5
Nitab4.5_0013716g0010 Nicotiana tabacum HOM05D008575 ORTHO05D011162 8.9e-08 60.8 102 35.3
FvH4_7g07710 Fragaria vesca HOM05D000462 ORTHO05D005846 1.2e-07 60.5 112 34.8
SGA_v2.0_scaffold15G07217 Striga asiatica HOM05D000395 ORTHO05D000088 2.0e-07 59.7 85 34.1
Nitab4.5_0003568g0030 Nicotiana tabacum HOM05D008575 ORTHO05D011162 3.4e-07 58.9 93 33.3
Nitab4.5_0004193g0050 Nicotiana tabacum HOM05D008575 ORTHO05D011162 3.4e-07 58.9 105 32.4
Nitab4.5_0006917g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 3.4e-07 58.9 76 38.2
RhsimUnG0104200 Rhododendron simsii HOM05D000395 ORTHO05D000088 5.8e-07 58.2 89 32.6
Nitab4.5_0007949g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 7.6e-07 57.8 83 36.1
Manes.13G130950 Manihot esculenta HOM05D000395 ORTHO05D000088 9.9e-07 57.4 84 39.3
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 9.9e-07 57.4 48 56.2
Nitab4.5_0002709g0040 Nicotiana tabacum HOM05D008575 ORTHO05D011162 1.3e-06 57.0 97 33.0
Nitab4.5_0003980g0050 Nicotiana tabacum HOM05D008575 ORTHO05D011162 1.3e-06 57.0 105 30.5
Aqoxy5G02385 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 1.7e-06 56.6 118 35.6
GSVIVG01031852001 Vitis vinifera HOM05D000395 ORTHO05D000088 1.7e-06 56.6 98 31.6
COL.COLO4_30629 Corchorus olitorius HOM05D000395 ORTHO05D000088 2.9e-06 55.8 105 34.3
Eucgr.H02901 Eucalyptus grandis HOM05D000395 ORTHO05D000088 2.9e-06 55.8 98 34.7
Nitab4.5_0001401g0160 Nicotiana tabacum HOM05D000395 ORTHO05D000088 2.9e-06 55.8 99 36.4
Nitab4.5_0013716g0020 Nicotiana tabacum HOM05D008575 ORTHO05D011162 3.8e-06 55.5 97 32.0
Sed0004402 Sechium edule HOM05D000395 ORTHO05D000088 4.9e-06 55.1 85 34.1
Nitab4.5_0002333g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 6.4e-06 54.7 60 45.0
Thecc.01G047200 Theobroma cacao HOM05D000395 ORTHO05D000088 6.4e-06 54.7 121 31.4
COL.COLO4_21442 Corchorus olitorius HOM05D012915 ORTHO05D012666 8.4e-06 54.3 90 32.2
DCAR_021667 Daucus carota HOM05D000395 ORTHO05D000088 8.4e-06 54.3 64 43.8
Nitab4.5_0000540g0100 Nicotiana tabacum HOM05D008575 ORTHO05D011162 8.4e-06 54.3 72 38.9
Peaxi162Scf00016g01352 Petunia axillaris HOM05D000395 ORTHO05D000088 8.4e-06 54.3 99 32.3
Sopen07g028530 Solanum pennellii HOM05D000395 ORTHO05D000088 8.4e-06 54.3 99 32.3
TWI09G0236 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 8.4e-06 54.3 97 35.1
TWI09G1611 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 8.4e-06 54.3 103 35.9


User provided reference genes

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