Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.2e-303 1045.8 583 100.0
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.9e-289 998.0 583 94.9
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 8.5e-204 714.1 583 72.7
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.2e-202 710.3 583 72.2
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 6.1e-202 708.0 583 72.0
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 1.5e-184 650.2 580 64.3
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 3.3e-184 649.0 509 73.9
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 6.6e-164 581.6 580 55.5
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 1.5e-163 580.5 580 59.0
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 1.3e-159 567.4 587 54.9
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.2e-157 560.8 599 52.6
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 8.0e-154 548.1 581 53.0
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 8.0e-154 548.1 580 55.2
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 1.5e-152 543.9 575 55.3
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.9e-150 537.0 579 54.1
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 1.0e-148 531.2 585 55.9
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 8.6e-148 528.1 578 53.8
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 2.0e-144 516.9 580 53.6
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.3e-143 514.2 555 55.3
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 7.1e-142 508.4 586 51.4
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 2.5e-139 500.0 553 52.1
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.1e-138 496.9 541 49.9
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 8.1e-138 495.0 576 52.1
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 1.1e-137 494.6 576 52.3
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.8e-137 493.8 576 50.7
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 2.2e-135 486.9 593 48.2
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 3.2e-134 483.0 580 48.4
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 7.1e-134 481.9 579 48.4
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 9.2e-134 481.5 577 50.3
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 2.1e-133 480.3 574 49.0
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 2.7e-133 479.9 578 49.1
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 6.0e-133 478.8 560 48.4
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 1.0e-132 478.0 579 50.6
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 1.7e-132 477.2 589 48.7
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 3.0e-132 476.5 532 49.8
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 5.6e-131 472.2 584 48.8
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.7e-130 469.2 580 47.2
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 2.4e-129 466.8 551 49.0
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 3.1e-129 466.5 580 47.6
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.2e-129 465.7 554 48.7
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 6.8e-129 465.3 572 51.2
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.4e-128 463.0 536 51.5
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 1.3e-127 461.1 602 50.8
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 3.8e-127 459.5 645 45.4
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 8.4e-127 458.4 564 47.2
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 3.2e-126 456.4 589 48.0
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 7.1e-126 455.3 565 46.2
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 9.3e-126 454.9 589 48.4
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 9.3e-126 454.9 580 48.8
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 9.3e-126 454.9 580 49.0
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 1.2e-125 454.5 561 46.9
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 1.7e-124 450.7 585 46.5
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 1.7e-124 450.7 553 46.1
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.9e-124 449.5 543 48.3
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 6.6e-124 448.7 565 46.7
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 6.6e-124 448.7 576 46.0
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 3.3e-123 446.4 580 47.6
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 3.3e-123 446.4 580 45.2
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 3.3e-123 446.4 553 45.8
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 1.3e-122 444.5 580 47.1
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.3e-122 444.5 580 47.2
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 1.3e-122 444.5 553 47.6
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.1e-122 443.7 580 47.1
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 2.1e-122 443.7 580 48.8
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 3.6e-122 443.0 562 45.9
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 1.1e-121 441.4 564 45.6
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 4.0e-121 439.5 554 49.1
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 4.0e-121 439.5 534 46.4
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.0e-120 437.2 565 46.4
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 8.4e-119 431.8 583 46.8
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.2e-118 429.9 580 46.7
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 3.5e-117 426.4 565 46.9
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 6.0e-117 425.6 552 44.2
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.7e-116 424.1 579 47.5
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 2.3e-116 423.7 583 45.5
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 1.1e-115 421.4 578 45.7
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 1.5e-115 421.0 589 44.1
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.6e-115 419.1 583 44.4
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 9.6e-115 418.3 576 43.4
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 9.6e-115 418.3 576 43.4
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 1.3e-114 417.9 581 46.8
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 3.6e-114 416.4 547 43.3
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 6.2e-114 415.6 534 43.4
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 6.2e-114 415.6 589 43.3
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 1.1e-113 414.8 576 43.2
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.1e-113 413.3 437 55.6
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 4.0e-113 412.9 535 44.1
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 4.0e-113 412.9 588 42.9
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 6.9e-113 412.1 532 44.5
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 9.0e-113 411.8 545 44.0
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 2.6e-112 410.2 543 43.1
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.8e-111 406.4 580 44.3
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 8.4e-111 405.2 570 46.5
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 7.1e-110 402.1 580 44.0
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.8e-108 397.5 564 44.3
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 5.6e-107 392.5 585 42.7
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.8e-106 390.2 548 44.5
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 2.4e-105 387.1 535 41.5
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 9.0e-105 385.2 472 49.2
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 4.5e-104 382.9 580 39.7
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 2.2e-103 380.6 537 43.8
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 8.4e-103 378.6 576 39.4
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 8.4e-103 378.6 576 39.2
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 1.1e-102 378.3 576 39.9
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 1.1e-102 378.3 583 43.6
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 1.6e-101 374.4 583 42.2
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 2.1e-101 374.0 591 42.1
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 7.9e-101 372.1 576 38.7
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 6.7e-100 369.0 578 38.9
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 6.7e-100 369.0 578 39.1
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 7.4e-99 365.5 535 41.3
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 2.0e-96 357.5 466 45.5
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 8.5e-95 352.1 359 57.1
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 4.6e-93 346.3 483 47.4
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.3e-92 344.7 384 51.6
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 7.7e-88 328.9 390 47.4
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 5.5e-86 322.8 551 39.0
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 5.5e-86 322.8 429 44.1
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 2.3e-84 317.4 468 41.9
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 8.8e-84 315.5 535 38.1
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.5e-83 314.7 574 40.2
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 9.7e-83 312.0 558 38.5
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 6.9e-81 305.8 262 61.8
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.6e-77 294.7 474 40.3
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 3.0e-76 290.4 474 40.9
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 3.2e-70 270.4 262 55.0
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 6.7e-68 262.7 569 32.3
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 4.4e-67 260.0 408 37.0
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.3e-58 231.9 446 35.4
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 6.3e-58 229.6 249 49.4
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.2e-55 221.1 296 45.9
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 3.6e-45 187.2 248 42.3
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 4.7e-45 186.8 262 47.3
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 4.7e-45 186.8 343 35.9
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.8e-44 183.0 260 42.7
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 4.9e-42 176.8 423 31.4
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 4.6e-40 170.2 171 60.8
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 7.8e-40 169.5 153 59.5
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.9e-38 164.9 150 60.7
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 2.5e-38 164.5 507 26.2
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.5e-38 164.5 150 60.0
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 2.3e-36 157.9 468 27.6
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 7.5e-35 152.9 163 57.1
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 3.7e-34 150.6 586 24.9
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 3.2e-33 147.5 551 25.8
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 3.9e-31 140.6 162 44.4
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.1e-30 139.0 179 48.0
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 6.2e-29 133.3 552 23.7
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.2e-28 130.2 146 46.6
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 1.9e-25 121.7 138 47.1
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.4e-25 121.3 112 58.0
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 4.1e-25 120.6 151 41.7
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.1e-24 118.2 143 44.8
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 4.6e-24 117.1 123 53.7
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.3e-23 114.8 164 41.5
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.2e-21 109.0 163 41.7
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 2.1e-21 108.2 556 25.0
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.4e-20 105.5 100 56.0
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 2.3e-20 104.8 128 49.2
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 6.8e-20 103.2 105 51.4
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.0e-19 101.7 108 47.2
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 4.1e-17 94.0 177 34.5
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 5.1e-15 87.0 135 37.0
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.6e-15 86.7 83 55.4
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.1e-14 85.9 120 45.8
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 4.3e-14 84.0 472 23.3
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 1.2e-13 82.4 253 24.9
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 1.2e-13 82.4 133 34.6
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 4.7e-13 80.5 81 51.9
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.4e-12 79.0 73 53.4
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.2e-11 75.9 66 60.6
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.0e-11 75.1 110 36.4
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 2.2e-10 71.6 55 63.6
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 2.9e-10 71.2 75 49.3
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 3.2e-09 67.8 67 50.7
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 3.2e-09 67.8 110 33.6
Solyc01g150163.1 Solanum lycopersicum HOM05D003578 ORTHO05D004021 3.2e-09 67.8 85 50.6
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.3e-07 61.6 65 47.7
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.3e-07 61.6 65 47.7
GSVIVG01023070001 Vitis vinifera HOM05D003578 ORTHO05D004021 8.7e-07 59.7 56 53.6
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 1.5e-06 58.9 60 53.3
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 3.3e-06 57.8 77 36.4
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 9.6e-06 56.2 53 49.1


User provided reference genes

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