Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003058g0070 Nicotiana tabacum HOM05D013006 ORTHO05D000007 6.2e-85 317.4 157 100.0
Nitab4.5_0003058g0080 Nicotiana tabacum HOM05D013006 ORTHO05D000007 7.1e-65 250.8 157 85.4
Nitab4.5_0003058g0090 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.2e-64 250.0 157 84.7
Nitab4.5_0001082g0100 Nicotiana tabacum HOM05D013006 ORTHO05D000007 3.7e-29 132.1 97 75.3
Nitab4.5_0000258g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-28 129.8 97 67.0
Nitab4.5_0005113g0010 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.2e-22 110.5 79 70.9
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-18 96.7 124 41.9
Nitab4.5_0002314g0130 Nicotiana tabacum HOM05D013006 ORTHO05D000007 5.0e-18 95.1 78 60.3
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.6e-18 94.4 124 41.1
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-17 93.6 124 40.3
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-17 92.4 124 39.5
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-17 90.9 111 43.2
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-16 88.6 111 45.9
Nitab4.5_0000386g0180 Nicotiana tabacum HOM05D028151 ORTHO05D000007 1.0e-15 87.4 64 71.9
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-15 86.3 124 39.5
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-15 84.7 104 43.3
Nitab4.5_0002314g0120 Nicotiana tabacum HOM05D028151 ORTHO05D000007 1.2e-14 84.0 75 60.0
Nitab4.5_0000676g0040 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.5e-14 83.6 62 69.4
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-14 83.6 124 34.7
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-14 82.8 111 37.8
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 2.6e-14 82.8 111 41.4
Nitab4.5_0000971g0170 Nicotiana tabacum HOM05D013006 ORTHO05D000007 3.4e-14 82.4 60 65.0
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.4e-14 82.4 125 37.6
Nitab4.5_0009093g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-14 82.0 103 38.8
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-13 80.5 111 38.7
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.3e-13 77.8 104 39.4
PGSC0003DMG400013852 Solanum tuberosum HOM05D000024 ORTHO05D000007 8.3e-13 77.8 106 37.7
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-12 77.4 111 36.9
Nitab4.5_0000041g0250 Nicotiana tabacum HOM05D028151 ORTHO05D000007 2.4e-12 76.3 88 48.9
Nitab4.5_0003188g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-12 76.3 106 39.6
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-12 74.7 124 37.1
PGSC0003DMG400042385 Solanum tuberosum HOM05D000024 ORTHO05D000007 7.0e-12 74.7 115 33.9
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-11 73.9 111 41.4
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 1.2e-11 73.9 107 42.1
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-11 73.6 106 37.7
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.0e-11 73.2 108 35.2
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-11 72.4 108 35.2
Nitab4.5_0000885g0130 Nicotiana tabacum HOM05D013006 ORTHO05D000007 3.5e-11 72.4 46 76.1
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-11 72.4 111 36.9
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 3.5e-11 72.4 105 38.1
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-11 72.0 124 35.5
Nitab4.5_0014470g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-11 72.0 115 31.3
Nitab4.5_0000712g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-11 71.6 111 37.8
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-11 71.6 103 37.9
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-11 71.6 113 36.3
Sopen00g001100 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-11 71.6 109 33.0
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-11 71.2 112 35.7
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.8e-11 71.2 115 36.5
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 7.8e-11 71.2 109 33.0
Sopen06g013970 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-10 70.9 105 34.3
Nitab4.5_0006711g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-10 70.5 105 38.1
Nitab4.5_0000606g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 70.1 58 51.7
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-10 70.1 107 41.1
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-10 69.7 105 33.3
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-10 69.7 105 33.3
Sopen00g009370 Solanum pennellii HOM05D000024 ORTHO05D000006 2.3e-10 69.7 105 33.3
Sopen01g008290 Solanum pennellii HOM05D000047 ORTHO05D000589 2.9e-10 69.3 105 34.3
PGSC0003DMG400043914 Solanum tuberosum HOM05D008663 ORTHO05D017125 3.8e-10 68.9 109 34.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-10 68.6 121 33.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-10 68.6 105 33.3
Sopen03g013510 Solanum pennellii HOM05D000014 ORTHO05D000016 5.0e-10 68.6 105 32.4
Sopen06g013950 Solanum pennellii HOM05D000003 ORTHO05D000004 6.6e-10 68.2 105 32.4
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 8.6e-10 67.8 105 33.3
Nitab4.5_0006025g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.4 112 33.0
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-09 67.4 111 35.1
Sopen08g013110 Solanum pennellii HOM05D000024 ORTHO05D000007 1.1e-09 67.4 105 33.3
Nitab4.5_0001444g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-09 67.0 100 42.0
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-09 67.0 110 35.5
Sopen08g016660 Solanum pennellii HOM05D000004 ORTHO05D000034 1.9e-09 66.6 88 43.2
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 66.2 103 34.0
Nitab4.5_0005004g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-09 66.2 115 29.6
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.5e-09 66.2 105 32.4
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.5e-09 66.2 105 33.3
PGSC0003DMG400047130 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.5e-09 66.2 107 29.9
Nitab4.5_0000527g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-09 65.9 90 41.1
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-09 65.9 108 35.2
Sopen09g030960 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-09 65.5 109 32.1
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 4.3e-09 65.5 109 33.0
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 4.3e-09 65.5 105 31.4
Nitab4.5_0002586g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-09 65.1 99 37.4
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-09 65.1 103 34.0
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.6e-09 65.1 107 33.6
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 5.6e-09 65.1 109 34.9
PGSC0003DMG400041037 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.6e-09 65.1 105 34.3
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-09 64.7 124 32.3
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.3e-09 64.7 58 51.7
Sopen11g002790 Solanum pennellii HOM05D000024 ORTHO05D000007 7.3e-09 64.7 109 34.9
Nitab4.5_0000902g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 64.3 115 30.4
Nitab4.5_0002487g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 64.3 106 36.8
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.5e-09 64.3 124 31.5
Peaxi162Scf00700g00051 Petunia axillaris HOM05D000070 ORTHO05D002524 9.5e-09 64.3 109 32.1
Nitab4.5_0005104g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-08 63.9 115 27.8
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 63.5 108 33.3
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 63.5 111 34.2
PGSC0003DMG400034636 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.6e-08 63.5 109 32.1
PGSC0003DMG400042088 Solanum tuberosum HOM05D000024 ORTHO05D011127 1.6e-08 63.5 109 33.0
Sopen04g015570 Solanum pennellii HOM05D000024 ORTHO05D000007 2.8e-08 62.8 105 31.4
Cc00_g22890 Coffea canephora HOM05D000024 ORTHO05D000007 3.6e-08 62.4 105 39.0
Nitab4.5_0000695g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-08 62.4 101 32.7
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-08 62.4 106 34.0
Sopen09g022950 Solanum pennellii HOM05D000003 ORTHO05D000004 4.7e-08 62.0 105 33.3
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-08 61.2 103 36.9
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-08 61.2 126 32.5
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-08 61.2 104 33.7
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 8.0e-08 61.2 105 31.4
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.8 110 32.7
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 60.8 73 39.7
Sopen02g005190 Solanum pennellii HOM05D000004 ORTHO05D000004 1.0e-07 60.8 121 28.9
Sopen11g018190 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-07 60.8 109 32.1
PGSC0003DMG400041338 Solanum tuberosum HOM05D000024 ORTHO05D000007 1.0e-07 60.8 105 32.4
Sopen00g003400 Solanum pennellii HOM05D000024 ORTHO05D000007 1.4e-07 60.5 112 29.5
Nitab4.5_0000541g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 60.1 100 34.0
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-07 60.1 108 33.3
Nitab4.5_0008416g0020 Nicotiana tabacum HOM05D013006 ORTHO05D000007 1.8e-07 60.1 45 62.2
Nitab4.5_0007908g0010 Nicotiana tabacum HOM05D013006 ORTHO05D000007 2.3e-07 59.7 44 70.5
Nitab4.5_0000134g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-07 59.3 73 43.8
Nitab4.5_0009832g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.8e-07 58.2 109 33.9
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 6.8e-07 58.2 104 30.8
Nitab4.5_0000023g0230 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-07 57.8 81 35.8
SHI34390 Sapria himalayana HOM05D000024 ORTHO05D000007 8.9e-07 57.8 111 35.1
Nitab4.5_0006080g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 57.0 96 33.3
Nitab4.5_0002372g0050 Nicotiana tabacum HOM05D013006 ORTHO05D000007 2.0e-06 56.6 42 64.3
Nitab4.5_0000640g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-06 56.2 129 31.8
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 5.8e-06 55.1 53 41.5
Nitab4.5_0003208g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.8e-06 55.1 96 33.3
SHI36717 Sapria himalayana HOM05D000024 ORTHO05D000007 5.8e-06 55.1 106 34.9
Nitab4.5_0000045g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-06 54.7 78 38.5
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-06 54.7 58 43.1
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-06 54.7 108 32.4
Nitab4.5_0004168g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-06 54.7 102 29.4
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.5e-06 54.7 108 34.3
SHI01372 Sapria himalayana HOM05D000024 ORTHO05D000007 7.5e-06 54.7 111 30.6
Nitab4.5_0000033g0390 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-06 54.3 73 41.1
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-06 54.3 45 48.9
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.8e-06 54.3 94 33.0
Sabra06G0000300 Salix brachista HOM05D000024 ORTHO05D000007 9.8e-06 54.3 107 29.0
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 9.8e-06 54.3 94 36.2
Sopen11g013340 Solanum pennellii HOM05D000024 ORTHO05D000007 9.8e-06 54.3 88 33.0
PGSC0003DMG400036258 Solanum tuberosum HOM05D012066 ORTHO05D017133 9.8e-06 54.3 84 39.3


User provided reference genes

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