Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003040g0140 Nicotiana tabacum HOM05D010102 ORTHO05D012244 1.3e-140 503.1 256 100.0
Nitab4.5_0000782g0120 Nicotiana tabacum HOM05D010102 ORTHO05D012244 1.4e-70 270.4 283 57.6
Nitab4.5_0008408g0020 Nicotiana tabacum HOM05D010102 ORTHO05D012244 3.1e-65 252.7 290 54.8
Nitab4.5_0000782g0150 Nicotiana tabacum HOM05D010102 ORTHO05D012244 7.9e-37 158.3 103 82.5
Sopen03g029250 Solanum pennellii HOM05D010102 ORTHO05D012244 1.9e-35 153.7 286 39.9
Solyc03g098530.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 9.0e-33 144.8 280 38.9
Sopen03g029260 Solanum pennellii HOM05D010102 ORTHO05D012244 5.5e-30 135.6 272 37.5
Solyc03g098540.2 Solanum lycopersicum HOM05D010102 ORTHO05D012244 1.8e-28 130.6 341 34.3
Nitab4.5_0003040g0170 Nicotiana tabacum HOM05D010102 ORTHO05D012244 3.9e-28 129.4 90 73.3
Solyc03g098545.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 1.9e-27 127.1 320 33.8
Sopen03g029270 Solanum pennellii HOM05D010102 ORTHO05D012244 1.9e-27 127.1 127 49.6
Solyc03g098535.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 5.6e-27 125.6 320 33.4
Nitab4.5_0000782g0160 Nicotiana tabacum HOM05D010102 ORTHO05D012244 5.8e-24 115.5 83 78.3
Nitab4.5_0000068g0060 Nicotiana tabacum HOM05D010102 ORTHO05D012244 1.9e-22 110.5 157 46.5
Nitab4.5_0006900g0020 Nicotiana tabacum HOM05D010102 ORTHO05D012244 5.5e-22 109.0 114 55.3
Sopen03g029240 Solanum pennellii HOM05D010102 ORTHO05D012244 1.2e-21 107.8 89 53.9
COL.COLO4_08211 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.7e-19 99.0 165 41.2
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-19 99.0 160 39.4
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 7.4e-19 98.6 150 42.0
Sopen12g010870 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-17 93.6 119 47.1
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.5e-16 89.4 119 42.9
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 7.7e-16 88.6 137 42.3
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 1.7e-15 87.4 97 49.5
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.2e-15 87.0 155 36.1
CAN.G1408.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.4e-14 84.3 118 43.2
Nn2g14341 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.4e-14 84.3 154 34.4
Atru.chr3.1971 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-14 84.0 114 38.6
Atru.chr3.1984 Acer truncatum HOM05D000004 ORTHO05D000002 1.9e-14 84.0 114 38.6
CAN.G608.32 Capsicum annuum HOM05D000004 ORTHO05D000002 2.5e-14 83.6 165 37.6
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 4.2e-14 82.8 129 40.3
AUR62003850 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.2e-13 81.3 131 38.9
Ah.07g201970 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.6e-13 79.7 119 37.8
Lalb_Chr01g0016101 Lupinus albus HOM05D000004 ORTHO05D000002 3.6e-13 79.7 119 39.5
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 3.6e-13 79.7 115 39.1
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-13 79.7 115 39.1
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.9e-13 78.6 116 39.7
CAN.G370.89 Capsicum annuum HOM05D000004 ORTHO05D000002 1.8e-12 77.4 122 45.1
CAN.G656.37 Capsicum annuum HOM05D000004 ORTHO05D000002 1.8e-12 77.4 151 38.4
AUR62041979 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.8e-12 77.4 116 41.4
TPR.G32498 Trifolium pratense HOM05D000004 ORTHO05D000002 3.0e-12 76.6 119 37.8
AUR62007521 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.9e-12 76.3 116 40.5
CAN.G699.9 Capsicum annuum HOM05D000004 ORTHO05D000002 5.1e-12 75.9 80 50.0
Nitab4.5_0008911g0010 Nicotiana tabacum HOM05D013382 ORTHO05D000002 5.1e-12 75.9 119 42.0
Ah.05g171460 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.7e-12 75.5 97 47.4
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 6.7e-12 75.5 119 39.5
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.8e-12 75.1 152 38.2
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-11 74.7 155 34.8
AUR62043028 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.5e-11 74.3 141 34.8
Rhsim06G0000800 Rhododendron simsii HOM05D000004 ORTHO05D000002 2.0e-11 73.9 119 39.5
AUR62007645 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.3e-11 73.2 116 39.7
Rhsim11G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.3e-11 73.2 119 37.8
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.4e-11 72.0 156 33.3
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.4e-11 72.0 153 36.6
Ah.12g064200 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.3e-10 71.2 140 32.9
CANSAT35G1793 Cannabis sativa HOM05D000004 ORTHO05D000002 1.3e-10 71.2 156 34.0
AUR62033910 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.2e-10 70.5 142 36.6
AUR62043001 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.2e-10 70.5 117 37.6
Ah.15g098410 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.8e-10 70.1 97 39.2
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 2.8e-10 70.1 123 35.0
Sopen05g011810 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-10 70.1 109 35.8
Ah.06g187770 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.7e-10 69.7 89 43.8
PSO731G0132 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-10 69.7 135 32.6
Rhsim01G0051500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.7e-10 69.7 116 38.8
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.8e-10 69.3 149 35.6
CSS0034428 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.3e-10 68.9 160 33.1
AUR62016413 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.2e-10 68.6 97 41.2
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 8.2e-10 68.6 97 41.2
CSS0010655 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-09 68.2 149 33.6
CAN.G1058.16 Capsicum annuum HOM05D000004 ORTHO05D000002 1.1e-09 68.2 117 40.2
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 1.1e-09 68.2 116 37.9
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 1.4e-09 67.8 116 37.9
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-09 67.8 191 28.8
Rhsim12G0205800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-09 67.8 144 33.3
Rhsim13G0092800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.4e-09 67.8 144 33.3
CAN.G189.28 Capsicum annuum HOM05D000004 ORTHO05D000002 1.8e-09 67.4 108 39.8
AUR62040097 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.4e-09 67.0 123 35.8
CSS0019420 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.1e-09 66.6 119 38.7
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 3.1e-09 66.6 101 37.6
CAN.G128.5 Capsicum annuum HOM05D000004 ORTHO05D000002 4.1e-09 66.2 118 37.3
AUR62041119 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.1e-09 66.2 97 40.2
PSO017G6161 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 66.2 162 32.1
PSO339G1576 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 66.2 136 32.4
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 4.1e-09 66.2 148 33.8
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-09 65.9 159 35.2
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-09 65.9 135 33.3
PSO170G6409 Papaver somniferum HOM05D000004 ORTHO05D000002 6.9e-09 65.5 114 37.7
AUR62035839 Chenopodium quinoa HOM05D000380 ORTHO05D002061 9.1e-09 65.1 92 44.6
PSO063G0403 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-09 65.1 133 31.6
CANSAT54G0535 Cannabis sativa HOM05D000004 ORTHO05D000002 1.2e-08 64.7 161 32.3
PSO478G0834 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-08 64.7 115 37.4
PSO675G8662 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-08 64.7 137 31.4
AUR62040360 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.5e-08 64.3 144 31.2
COL.COLO4_35781 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.5e-08 64.3 155 35.5
PSO478G3301 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-08 64.3 116 35.3
SHI52922 Sapria himalayana HOM05D000004 ORTHO05D000002 1.5e-08 64.3 155 31.6
Psat5g251080 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-08 63.9 127 35.4
CAN.G674.43 Capsicum annuum HOM05D000004 ORTHO05D000002 2.6e-08 63.5 130 40.0
Nitab4.5_0003040g0160 Nicotiana tabacum HOM05D010102 ORTHO05D012244 2.6e-08 63.5 88 46.6
PSO782G2610 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-08 63.5 116 34.5
AUR62031087 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.4e-08 63.2 79 44.3
AUR62031752 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.4e-08 63.2 112 37.5
AUR62042640 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.4e-08 63.2 97 39.2
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.4e-08 63.2 161 29.8
PSO832G2519 Papaver somniferum HOM05D000004 ORTHO05D000002 3.4e-08 63.2 137 34.3
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 3.4e-08 63.2 97 37.1
PSO017G1409 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-08 62.8 116 33.6
PSO675G9287 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-08 62.8 115 35.7
PSO700G0030 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-08 62.8 114 35.1
ECA247G3748 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.9e-08 62.4 148 30.4
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-08 62.4 138 34.1
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 5.9e-08 62.4 152 32.9
CAN.G960.71 Capsicum annuum HOM05D000004 ORTHO05D000002 7.7e-08 62.0 88 40.9
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-08 62.0 126 34.1
CAN.G351.14 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-07 61.6 88 43.2
PSO063G0124 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-07 61.6 115 35.7
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-07 61.6 115 34.8
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 136 33.1
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 136 33.1
PSO782G4520 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 61.2 163 30.1
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-07 60.8 131 32.8
Nn5g28532 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.7e-07 60.8 157 33.8
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 60.8 115 34.8
Psat7g229840 Pisum sativum HOM05D000044 ORTHO05D000002 1.7e-07 60.8 132 32.6
CAN.G1059.2 Capsicum annuum HOM05D000004 ORTHO05D000002 2.2e-07 60.5 78 43.6
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 60.5 113 35.4
PSO493G0015 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 60.5 156 31.4
PSO675G5638 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 60.5 149 32.2
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 2.2e-07 60.5 120 35.0
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-07 60.1 114 35.1
PSO017G2019 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 60.1 146 31.5
PSO017G3809 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 60.1 169 30.8
PSO170G4770 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 60.1 136 33.1
PSO541G3547 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 60.1 136 33.1
PSO541G6020 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 60.1 149 32.2
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 2.9e-07 60.1 114 36.0
Sopen02g028910 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 60.1 77 46.8
Hma1.2p1_0487F.1_g163610 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.8e-07 59.7 94 40.4
MD14G1073100 Malus domestica HOM05D001739 ORTHO05D000002 3.8e-07 59.7 170 30.6
PSO017G0431 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-07 59.7 136 33.8
PSO478G0249 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-07 59.7 136 33.1
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 3.8e-07 59.7 132 31.8
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 5.0e-07 59.3 135 32.6
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 5.0e-07 59.3 135 32.6
ECA232G4351 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-07 59.3 172 30.2
PSO801G0540 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-07 59.3 116 33.6
Psat4g060720 Pisum sativum HOM05D000004 ORTHO05D000002 5.0e-07 59.3 114 36.0
Psat5g267400 Pisum sativum HOM05D000004 ORTHO05D000002 5.0e-07 59.3 132 31.1
Sopen04g022550 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 59.3 122 33.6
AUR62002516 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.5e-07 58.9 153 34.0
ECA240G1722 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-07 58.9 115 33.9
ECA246G5244 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-07 58.9 158 32.9
PSO063G0887 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-07 58.9 109 36.7
PSO170G2620 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-07 58.9 152 32.2
AUR62027767 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.5e-07 58.5 117 39.3
PSO384G1135 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-07 58.5 116 33.6
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 8.5e-07 58.5 97 38.1
Psat2g029440 Pisum sativum HOM05D000004 ORTHO05D000002 8.5e-07 58.5 116 35.3
Psat5g265160 Pisum sativum HOM05D000004 ORTHO05D000002 8.5e-07 58.5 97 35.1
SHI15690 Sapria himalayana HOM05D000004 ORTHO05D000002 8.5e-07 58.5 155 31.6
PSO339G1921 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 58.2 108 35.2
PSO541G0654 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 58.2 161 30.4
Rhsim07G0137500 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.1e-06 58.2 120 34.2
SHI20497 Sapria himalayana HOM05D000004 ORTHO05D000002 1.1e-06 58.2 121 33.9
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.8 205 27.3
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 57.8 151 29.8
PSO832G4448 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 57.8 156 30.8
Psat2g059920 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-06 57.8 114 35.1
COL.COLO4_23642 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.9e-06 57.4 126 34.1
PSO017G2872 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 57.4 120 34.2
PSO339G3572 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 57.4 120 34.2
PSO478G1777 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 57.4 120 34.2
Psat4g090320 Pisum sativum HOM05D000004 ORTHO05D000002 1.9e-06 57.4 114 33.3
RhsimUnG0001700 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.9e-06 57.4 115 34.8
PSO063G4083 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-06 57.0 116 33.6
PSO384G1149 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-06 57.0 141 33.3
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 3.2e-06 56.6 50 54.0
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 4.2e-06 56.2 128 34.4
Psat2g046080 Pisum sativum HOM05D000004 ORTHO05D000002 4.2e-06 56.2 115 33.9
Sopen08g010010 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-06 56.2 97 35.1
FvH4_7g29722 Fragaria vesca HOM05D000004 ORTHO05D000002 5.5e-06 55.8 121 33.1
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 5.5e-06 55.8 115 33.9
TWI09G0429 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 5.5e-06 55.8 167 29.9
Lj3C465G7 Lonicera japonica HOM05D000004 ORTHO05D000002 7.2e-06 55.5 128 34.4
PSO210G2668 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-06 55.5 156 30.1
CAN.G430.5 Capsicum annuum HOM05D000004 ORTHO05D000002 9.4e-06 55.1 115 34.8
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.4e-06 55.1 228 28.5
Rhsim02G0149500 Rhododendron simsii HOM05D000004 ORTHO05D000002 9.4e-06 55.1 119 35.3


User provided reference genes

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