Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.7e-83 312.8 170 100.0
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 2.9e-72 275.4 170 88.8
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.4e-68 261.9 170 82.9
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.3e-67 257.3 170 81.8
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.6e-65 253.1 170 81.2
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 3.5e-65 251.9 170 80.6
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 1.3e-64 250.0 170 81.8
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.9e-64 248.8 170 77.1
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 3.8e-64 248.4 170 80.6
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 3.2e-63 245.4 170 77.1
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 4.2e-63 245.0 171 78.9
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 4.2e-63 245.0 170 76.5
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 5.5e-63 244.6 170 77.6
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 7.2e-63 244.2 170 78.2
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.2e-62 243.4 170 77.6
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.2e-62 243.4 169 75.7
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 2.1e-62 242.7 170 78.2
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 4.7e-62 241.5 170 77.1
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 4.7e-62 241.5 171 76.6
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 4.7e-62 241.5 170 78.8
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 6.1e-62 241.1 170 77.6
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 8.0e-62 240.7 170 74.7
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 1.4e-61 240.0 162 78.4
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.8e-61 239.6 170 78.2
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 1.8e-61 239.6 170 75.9
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 3.0e-61 238.8 170 75.9
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 3.0e-61 238.8 170 74.7
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 5.2e-61 238.0 170 75.9
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 6.8e-61 237.7 170 77.1
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 6.8e-61 237.7 170 75.3
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 6.8e-61 237.7 170 75.3
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 8.8e-61 237.3 172 77.9
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 1.2e-60 236.9 170 76.5
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 1.2e-60 236.9 171 76.0
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.5e-60 236.5 171 76.0
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 2.6e-60 235.7 172 77.3
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 7.5e-60 234.2 170 74.7
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 1.3e-59 233.4 170 74.7
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.3e-59 233.4 170 72.9
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.3e-59 233.4 170 74.7
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.7e-59 233.0 170 71.2
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.7e-59 233.0 170 74.1
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.2e-59 232.6 170 74.7
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.8e-59 232.3 173 75.7
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 3.7e-59 231.9 170 74.1
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 4.9e-59 231.5 172 72.1
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 4.9e-59 231.5 171 74.9
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 4.9e-59 231.5 170 72.9
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 4.9e-59 231.5 170 72.4
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 4.9e-59 231.5 170 74.7
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.1e-58 230.3 170 72.9
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 1.4e-58 229.9 170 73.5
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.4e-58 229.9 171 73.1
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.4e-58 229.9 170 74.7
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 1.4e-58 229.9 170 72.9
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 1.8e-58 229.6 171 73.7
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 2.4e-58 229.2 170 73.5
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 3.1e-58 228.8 170 74.7
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 3.1e-58 228.8 170 72.4
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 3.1e-58 228.8 171 76.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 3.1e-58 228.8 171 76.6
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 5.4e-58 228.0 170 73.5
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 5.4e-58 228.0 171 71.9
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 7.0e-58 227.6 170 72.9
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 2.7e-57 225.7 170 71.8
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 3.5e-57 225.3 170 73.5
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 1.0e-56 223.8 173 73.4
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.0e-56 223.8 167 70.1
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 1.3e-56 223.4 171 73.1
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 1.3e-56 223.4 172 72.1
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 1.3e-56 223.4 171 71.3
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 1.3e-56 223.4 170 69.4
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.3e-56 223.4 170 71.2
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.3e-56 222.6 170 72.4
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 2.3e-56 222.6 171 71.3
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 2.9e-56 222.2 171 72.5
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 2.9e-56 222.2 170 71.8
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 2.9e-56 222.2 170 71.8
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 2.9e-56 222.2 170 71.8
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 8.6e-56 220.7 172 69.8
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 1.1e-55 220.3 170 71.8
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.1e-55 220.3 170 71.8
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.1e-55 220.3 166 74.1
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.1e-55 220.3 170 71.2
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 1.5e-55 219.9 172 70.3
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.5e-55 219.9 171 73.7
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.9e-55 219.5 171 71.3
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 7.3e-55 217.6 172 69.8
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 7.3e-55 217.6 170 70.0
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 9.5e-55 217.2 173 68.2
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 1.2e-54 216.9 170 69.4
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 1.2e-54 216.9 170 69.4
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.2e-54 216.9 172 71.5
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.6e-54 216.5 170 69.4
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.6e-54 215.3 171 71.3
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.7e-54 214.9 172 69.8
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 8.0e-54 214.2 171 69.6
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 8.0e-54 214.2 170 67.6
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 8.0e-54 214.2 170 69.4
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 1.0e-53 213.8 170 68.8
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 1.0e-53 213.8 170 68.8
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.0e-53 213.8 167 70.1
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-53 213.4 170 70.0
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.3e-53 212.6 172 69.2
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 69.6
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 67.6
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.0e-53 211.8 171 69.6
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 5.2e-53 211.5 171 67.8
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 5.2e-53 211.5 171 67.8
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 5.2e-53 211.5 171 67.8
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 6.8e-53 211.1 170 68.2
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 6.8e-53 211.1 171 67.3
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 1.5e-52 209.9 171 67.3
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 2.0e-52 209.5 170 68.8
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 2.0e-52 209.5 171 69.6
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 2.0e-52 209.5 170 68.8
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.6e-52 209.1 170 67.6
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.6e-52 209.1 156 76.3
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.4e-52 208.8 170 68.8
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 3.4e-52 208.8 170 68.8
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.4e-52 208.8 170 68.8
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 4.4e-52 208.4 170 68.8
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 4.4e-52 208.4 170 68.8
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 4.4e-52 208.4 170 68.8
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 4.4e-52 208.4 170 68.8
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 5.7e-52 208.0 171 69.0
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 7.5e-52 207.6 170 68.2
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 7.5e-52 207.6 170 68.8
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.7e-51 206.5 163 67.5
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.9e-51 205.7 168 67.3
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 2.9e-51 205.7 166 67.5
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 6.4e-51 204.5 160 71.2
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 8.3e-51 204.1 172 68.0
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.8e-50 203.0 167 67.7
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 3.2e-50 202.2 170 63.5
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 2.0e-49 199.5 147 78.2
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 3.5e-49 198.7 169 66.9
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 2.3e-48 196.1 163 65.6
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 2.4e-42 176.0 171 60.8
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 3.2e-42 175.6 102 79.4
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 2.7e-41 172.6 172 60.5
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 6.0e-41 171.4 100 79.0
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 2.3e-40 169.5 171 60.8
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 3.9e-40 168.7 102 76.5
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 5.0e-40 168.3 100 77.0
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 7.3e-39 164.5 121 74.4
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.0e-36 156.4 171 52.0
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 1.3e-35 153.7 176 53.4
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 4.1e-34 148.7 167 50.3
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 4.6e-33 145.2 178 48.9
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 6.0e-33 144.8 217 45.6
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.0e-32 144.1 170 45.9
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.6e-32 141.0 70 92.9
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.9e-31 139.8 70 92.9
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 5.6e-31 138.3 174 45.4
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 4.0e-29 132.1 171 49.7
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 3.8e-27 125.6 178 48.9
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 3.8e-27 125.6 141 50.4
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 1.9e-26 123.2 141 51.1
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 1.3e-24 117.1 173 45.7
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-22 110.5 67 79.1
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.6e-22 110.2 81 69.1
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 6.9e-21 104.8 173 40.5
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 8.1e-14 81.3 44 81.8
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 1.4e-13 80.5 70 77.1
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 2.8e-06 56.2 66 65.2


User provided reference genes

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