Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 7.0e-309 1063.1 547 100.0
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.9e-266 922.2 548 90.0
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.1e-192 677.2 655 59.2
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 6.8e-179 631.3 661 55.7
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 8.8e-179 630.9 661 55.5
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 6.9e-139 498.4 666 45.5
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 3.3e-125 453.0 650 41.7
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 5.8e-122 442.2 659 41.9
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 8.4e-121 438.3 647 42.2
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.7e-119 433.3 663 42.4
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 7.9e-119 431.8 645 41.9
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.0e-118 431.4 625 43.0
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 3.3e-117 426.4 622 43.7
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.5e-114 417.5 642 40.0
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.3e-113 414.5 650 40.2
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 7.1e-112 408.7 653 40.0
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.6e-111 407.5 667 39.4
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.3e-110 403.7 646 39.2
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 6.7e-110 402.1 715 38.5
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.8e-108 396.7 640 38.8
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 4.8e-108 396.0 645 37.5
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 2.4e-107 393.7 607 42.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 2.4e-107 393.7 647 38.2
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 6.9e-107 392.1 625 41.1
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.2e-105 387.1 650 39.2
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.4e-104 384.4 633 39.7
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 4.2e-104 382.9 646 39.3
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 4.2e-104 382.9 654 38.5
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 7.2e-104 382.1 667 34.9
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 7.2e-104 382.1 655 38.6
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 9.3e-104 381.7 634 38.2
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 1.6e-103 380.9 645 37.2
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 6.1e-103 379.0 641 37.3
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 1.3e-102 377.9 644 37.4
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.3e-102 377.9 650 38.0
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 2.3e-102 377.1 636 38.4
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.5e-101 373.6 650 36.3
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.5e-101 373.6 655 38.6
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 4.3e-101 372.9 643 36.1
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 5.7e-101 372.5 641 38.5
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 7.4e-101 372.1 632 38.0
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.2e-100 370.5 649 38.7
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 2.2e-100 370.5 660 37.0
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.4e-99 367.1 665 35.9
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 3.1e-99 366.7 641 37.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 4.1e-99 366.3 633 37.8
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 9.1e-99 365.2 680 36.0
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.2e-98 364.8 663 36.3
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 2.0e-98 364.0 696 36.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.0e-98 364.0 655 38.0
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 3.4e-98 363.2 636 37.1
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.7e-97 360.9 635 38.4
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-96 358.2 663 35.7
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 1.4e-96 357.8 651 35.8
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 4.6e-95 352.8 642 37.7
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 8.8e-94 348.6 635 36.1
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.5e-93 347.8 694 33.7
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 3.1e-91 340.1 653 36.4
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 5.3e-91 339.3 640 36.7
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 6.9e-91 339.0 655 33.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 5.9e-90 335.9 649 35.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 7.7e-90 335.5 644 37.1
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.2e-88 330.1 661 34.3
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 3.9e-86 323.2 613 36.5
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.8e-84 317.0 644 35.4
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 6.5e-81 305.8 669 31.2
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.2e-79 301.6 638 33.4
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.8e-78 297.7 560 35.0
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.0e-78 297.0 516 37.6
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.2e-77 295.0 347 47.6
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.2e-77 295.0 347 47.6
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 3.3e-77 293.5 632 33.5
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.7e-77 292.7 652 33.1
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 9.1e-75 285.4 639 33.5
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.3e-73 281.6 635 32.8
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 3.8e-73 280.0 639 34.0
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 3.2e-72 276.9 645 32.6
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.1e-71 274.2 650 31.2
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 6.1e-71 272.7 494 37.4
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 6.8e-70 269.2 543 35.7
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.5e-69 268.1 633 31.8
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 2.6e-69 267.3 667 31.2
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 7.5e-69 265.8 648 30.9
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.3e-68 265.0 657 30.6
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.8e-68 263.8 557 32.3
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.8e-68 263.8 614 30.8
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 6.3e-68 262.7 515 36.7
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 8.3e-68 262.3 651 31.3
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.8e-67 261.2 292 49.7
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 4.1e-67 260.0 658 30.1
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.2e-61 241.9 655 29.9
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 5.4e-59 233.0 150 80.7
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 7.3e-56 222.6 152 75.7
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 6.8e-54 216.1 501 33.1
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.6e-53 214.2 538 31.6
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 7.5e-53 212.6 365 38.4
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.4e-46 191.8 226 47.3
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.1e-46 190.7 422 33.2
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.2e-46 189.9 416 33.4
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.7e-44 183.7 422 33.2
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 1.2e-42 178.7 129 73.6
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.6e-41 172.6 396 33.3
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 8.9e-38 162.5 276 37.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.0e-33 149.1 199 45.2
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 5.6e-32 143.3 154 48.1
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 8.9e-30 136.0 491 26.9
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.6e-29 134.4 164 45.1
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 6.6e-25 119.8 77 70.1
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 8.7e-17 92.8 607 23.1
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 6.2e-15 86.7 231 27.7
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 3.1e-14 84.3 70 58.6
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 8.4e-12 76.3 123 41.5
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.2e-11 74.3 304 23.7
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.2e-10 72.4 315 25.7
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.7e-10 71.2 60 55.0
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 2.7e-10 71.2 232 25.0
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 7.9e-10 69.7 68 51.5
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.0e-09 69.3 59 55.9
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 6.7e-09 66.6 60 53.3
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 8.7e-09 66.2 98 41.8
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.1e-06 59.3 48 58.3


User provided reference genes

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