Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002940g0040 Nicotiana tabacum HOM05D003114 ORTHO05D003519 3.3e-245 851.3 429 100.0
Nitab4.5_0008571g0020 Nicotiana tabacum HOM05D003114 ORTHO05D003519 9.2e-115 417.9 220 98.2
Peaxi162Scf01340g00219 Petunia axillaris HOM05D003114 ORTHO05D003519 1.2e-111 407.5 219 95.9
Solyc07g025170.3 Solanum lycopersicum HOM05D003114 ORTHO05D003519 6.2e-111 405.2 219 95.0
Sopen07g012830 Solanum pennellii HOM05D003114 ORTHO05D003519 6.2e-111 405.2 219 95.0
Cc10_g03540 Coffea canephora HOM05D003114 ORTHO05D003519 8.4e-100 368.2 219 86.8
Dinv36027 Davidia involucrata HOM05D003114 ORTHO05D003519 2.4e-99 366.7 233 83.3
Dinv39367 Davidia involucrata HOM05D003114 ORTHO05D003519 5.4e-99 365.5 219 86.3
Actinidia38026 Actinidia chinensis HOM05D003114 ORTHO05D003519 2.7e-98 363.2 219 85.4
Solyc12g088990.2 Solanum lycopersicum HOM05D003114 ORTHO05D003519 7.8e-98 361.7 219 85.4
Sopen12g030890 Solanum pennellii HOM05D003114 ORTHO05D003519 7.8e-98 361.7 219 85.4
CAN.G1002.6 Capsicum annuum HOM05D003114 ORTHO05D003519 1.1e-96 357.8 219 83.6
Migut.C00667 Erythranthe guttata HOM05D003114 ORTHO05D003519 3.3e-96 356.3 219 83.1
Migut.E01196 Erythranthe guttata HOM05D003114 ORTHO05D003519 3.3e-96 356.3 219 84.0
Nitab4.5_0000453g0100 Nicotiana tabacum HOM05D003114 ORTHO05D003519 5.6e-96 355.5 219 83.1
Nitab4.5_0000790g0060 Nicotiana tabacum HOM05D003114 ORTHO05D003519 9.6e-96 354.8 219 83.1
Oeu009593.2 Olea europaea HOM05D003114 ORTHO05D003519 1.3e-95 354.4 219 84.5
Rhsim12G0123700 Rhododendron simsii HOM05D003114 ORTHO05D003519 2.8e-95 353.2 219 83.6
Eucgr.A00473 Eucalyptus grandis HOM05D003114 ORTHO05D003519 4.8e-95 352.4 219 83.6
SGA_v2.0_scaffold24G10278 Striga asiatica HOM05D003114 ORTHO05D003519 6.2e-95 352.1 219 83.1
Ciclev10000230m.g Citrus clementina HOM05D003114 ORTHO05D003519 1.1e-94 351.3 219 83.6
Potri.014G039100 Populus trichocarpa HOM05D003114 ORTHO05D003519 3.1e-94 349.7 221 84.2
GSVIVG01009623001 Vitis vinifera HOM05D003114 ORTHO05D003519 3.1e-94 349.7 219 83.1
Peaxi162Scf00064g00324 Petunia axillaris HOM05D003114 ORTHO05D003519 4.0e-94 349.4 221 82.4
Oeu015606.1 Olea europaea HOM05D003114 ORTHO05D003519 5.3e-94 349.0 219 82.6
Duzib041G0357 Durio zibethinus HOM05D003114 ORTHO05D003519 9.0e-94 348.2 219 82.2
Hma1.2p1_0260F.1_g104360 Hydrangea macrophylla HOM05D003114 ORTHO05D003519 9.0e-94 348.2 219 83.6
CiPaw.15G069400 Carya illinoinensis HOM05D003114 ORTHO05D003519 2.6e-93 346.7 219 82.6
SalBow8G4186 Salvia bowleyana HOM05D003114 ORTHO05D003519 3.4e-93 346.3 219 81.7
Thecc.08G020200 Theobroma cacao HOM05D003114 ORTHO05D003519 4.5e-93 345.9 219 82.2
QL02p007130 Quercus lobata HOM05D003114 ORTHO05D003519 9.9e-93 344.7 219 81.7
TWI12G1412 Tripterygium wilfordii HOM05D003114 ORTHO05D003519 1.3e-92 344.4 219 82.2
Atru.chr13.574 Acer truncatum HOM05D003114 ORTHO05D003519 2.9e-92 343.2 216 82.4
Duzib093G1140 Durio zibethinus HOM05D003114 ORTHO05D003519 2.9e-92 343.2 219 82.2
PSO170G0663 Papaver somniferum HOM05D003114 ORTHO05D003519 2.9e-92 343.2 219 79.0
PSO700G0395 Papaver somniferum HOM05D003114 ORTHO05D003519 2.9e-92 343.2 219 79.0
MSTRG.22284 Avicennia marina HOM05D003114 ORTHO05D003519 3.8e-92 342.8 219 81.3
Potri.002G131400 Populus trichocarpa HOM05D003114 ORTHO05D003519 6.4e-92 342.0 220 81.8
COL.COLO4_26390 Corchorus olitorius HOM05D003114 ORTHO05D003519 8.4e-92 341.7 219 80.4
TAR381G0473 Trochodendron aralioides HOM05D003114 ORTHO05D003519 8.4e-92 341.7 222 80.6
MELO3C003892.2 Cucumis melo HOM05D003114 ORTHO05D003519 1.1e-91 341.3 219 81.7
CsaV3_3G044820 Cucumis sativus L. HOM05D003114 ORTHO05D003519 1.1e-91 341.3 219 81.7
Migut.N02678 Erythranthe guttata HOM05D003114 ORTHO05D003519 1.1e-91 341.3 219 80.4
HanXRQChr02g0045841 Helianthus annuus HOM05D003114 ORTHO05D003519 1.1e-91 341.3 221 81.4
Sabra02G0103300 Salix brachista HOM05D003114 ORTHO05D003519 1.9e-91 340.5 220 82.7
CANSAT25G1109 Cannabis sativa HOM05D003114 ORTHO05D003519 2.4e-91 340.1 219 80.4
Gohir.A05G197600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 4.2e-91 339.3 219 80.4
Gohir.D05G200600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 4.2e-91 339.3 219 80.4
Gorai.009G205900 Gossypium raimondii HOM05D003114 ORTHO05D003519 4.2e-91 339.3 219 80.4
ClCG05G019260 Citrullus lanatus HOM05D003114 ORTHO05D003519 5.4e-91 339.0 219 81.3
AL1G53790 Arabidopsis lyrata HOM05D003114 ORTHO05D003519 9.3e-91 338.2 219 78.1
CiPaw.16G052700 Carya illinoinensis HOM05D003114 ORTHO05D003519 9.3e-91 338.2 222 81.1
Lsat_1_v5_gn_1_19460 Lactuca sativa HOM05D003114 ORTHO05D003519 9.3e-91 338.2 221 81.0
Aqoxy6G00963 Aquilegia oxysepala HOM05D003114 ORTHO05D003519 1.2e-90 337.8 219 79.0
Haze_17610 Corylus avellana HOM05D003114 ORTHO05D003519 1.2e-90 337.8 219 80.8
Manes.18G031300 Manihot esculenta HOM05D003114 ORTHO05D003519 1.6e-90 337.4 219 80.4
Lj4C782G7 Lonicera japonica HOM05D003114 ORTHO05D003519 2.7e-90 336.7 219 81.3
TWI36G0061 Tripterygium wilfordii HOM05D003114 ORTHO05D003519 2.7e-90 336.7 230 77.4
THA.LOC104803395 Tarenaya hassleriana HOM05D003114 ORTHO05D003519 4.6e-90 335.9 220 80.0
TAR625G0620 Trochodendron aralioides HOM05D003114 ORTHO05D003519 4.6e-90 335.9 221 79.6
MSTRG.1310 Avicennia marina HOM05D003114 ORTHO05D003519 7.9e-90 335.1 219 79.9
Carub.0001s3632 Capsella rubella HOM05D003114 ORTHO05D003519 1.0e-89 334.7 219 77.6
BcaC08g42958 Brassica carinata HOM05D003114 ORTHO05D003519 1.3e-89 334.3 219 77.2
C06p01990 Brassica napus HOM05D003114 ORTHO05D003519 1.3e-89 334.3 219 77.2
PGR083G1829 Punica granatum HOM05D003114 ORTHO05D003519 1.3e-89 334.3 221 78.7
Sed0016520 Sechium edule HOM05D003114 ORTHO05D003519 1.8e-89 334.0 221 80.5
BcaB07g33828 Brassica carinata HOM05D003114 ORTHO05D003519 3.0e-89 333.2 219 76.7
A10p06300 Brassica napus HOM05D003114 ORTHO05D003519 3.0e-89 333.2 219 76.7
BraA10t42896Z Brassica rapa HOM05D003114 ORTHO05D003519 3.0e-89 333.2 219 76.7
Thhalv10011225m.g Eutrema salsugineum HOM05D003114 ORTHO05D003519 3.0e-89 333.2 219 76.7
Aa31sc119G20 Aethionema arabicum HOM05D003114 ORTHO05D003519 3.9e-89 332.8 219 76.7
FvH4_2g40450 Fragaria vesca HOM05D003114 ORTHO05D003519 5.1e-89 332.4 219 79.9
Sp1g34560 Schrenkiella parvula HOM05D003114 ORTHO05D003519 5.1e-89 332.4 219 76.7
AT1G47550 Arabidopsis thaliana HOM05D003114 ORTHO05D003519 6.7e-89 332.0 219 77.2
CARHR037120 Cardamine hirsuta HOM05D003114 ORTHO05D003519 8.7e-89 331.6 219 77.2
Lj4C47G8 Lonicera japonica HOM05D003114 ORTHO05D003519 8.7e-89 331.6 220 79.5
ECA247G0467 Erigeron canadensis HOM05D003114 ORTHO05D003519 1.1e-88 331.3 219 78.1
MSTRG.24311 Avicennia marina HOM05D003114 ORTHO05D003519 1.5e-88 330.9 219 78.5
EL10Ac5g11704 Beta vulgaris HOM05D003114 ORTHO05D003519 1.9e-88 330.5 220 78.2
FAN20G2585 Fragaria x ananassa HOM05D003114 ORTHO05D003519 1.9e-88 330.5 219 79.5
Lj1g0027709 Lotus japonicus HOM05D003114 ORTHO05D003519 1.9e-88 330.5 220 80.0
Lalb_Chr08g0245771 Lupinus albus HOM05D003114 ORTHO05D003519 1.9e-88 330.5 219 80.4
MD08G1038000 Malus domestica HOM05D003114 ORTHO05D003519 2.5e-88 330.1 219 79.0
FAN27G1632 Fragaria x ananassa HOM05D003114 ORTHO05D003519 3.3e-88 329.7 219 79.0
FAN15G2607 Fragaria x ananassa HOM05D003114 ORTHO05D003519 5.6e-88 328.9 219 79.0
VMungo0647G1300 Vigna mungo HOM05D003114 ORTHO05D003519 7.4e-88 328.6 220 79.1
MD00G1038900 Malus domestica HOM05D003114 ORTHO05D003519 9.6e-88 328.2 219 79.0
RcHm_v2.0_Chr6g0300281 Rosa chinensis HOM05D003114 ORTHO05D003519 2.1e-87 327.0 220 78.2
Gohir.A11G224300 Gossypium hirsutum HOM05D003114 ORTHO05D003519 3.7e-87 326.2 230 74.8
Gohir.D11G228600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 3.7e-87 326.2 230 74.8
Medtr3g111590 Medicago truncatula HOM05D003114 ORTHO05D003519 4.8e-87 325.9 220 77.3
Nn5g29441 Nelumbo nucifera HOM05D003114 ORTHO05D003519 4.8e-87 325.9 223 76.7
Aqoxy5G01744 Aquilegia oxysepala HOM05D003114 ORTHO05D003519 8.1e-87 325.1 219 74.9
AT1G47560 Arabidopsis thaliana HOM05D003114 ORTHO05D003519 1.4e-86 324.3 219 75.8
Gorai.007G245700 Gossypium raimondii HOM05D003114 ORTHO05D003519 1.4e-86 324.3 230 74.3
Sed0021383 Sechium edule HOM05D003114 ORTHO05D003519 1.4e-86 324.3 219 78.1
CANSAT21G1752 Cannabis sativa HOM05D003114 ORTHO05D003519 1.8e-86 323.9 222 77.0
SGA_v2.0_scaffold14G07047 Striga asiatica HOM05D003114 ORTHO05D003519 1.8e-86 323.9 237 73.0
PSO541G3592 Papaver somniferum HOM05D003114 ORTHO05D003519 2.4e-86 323.6 219 76.3
PSO675G2900 Papaver somniferum HOM05D003114 ORTHO05D003519 9.0e-86 321.6 219 76.3
AUR62042151 Chenopodium quinoa HOM05D003114 ORTHO05D003519 1.5e-85 320.9 219 76.7
Lj5g0027441 Lotus japonicus HOM05D003114 ORTHO05D003519 2.0e-85 320.5 219 76.7
Phvul.001G017700 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 2.0e-85 320.5 229 74.7
Lalb_Chr24g0399101 Lupinus albus HOM05D003114 ORTHO05D003519 2.6e-85 320.1 219 75.8
PGR031G3129 Punica granatum HOM05D003114 ORTHO05D003519 4.5e-85 319.3 221 76.9
Glyma.04G034700 Glycine max HOM05D003114 ORTHO05D003519 5.8e-85 318.9 220 78.6
Psat0s3702g0080 Pisum sativum HOM05D003114 ORTHO05D003519 5.8e-85 318.9 220 75.9
Lalb_Chr22g0355341 Lupinus albus HOM05D003114 ORTHO05D003519 2.2e-84 317.0 219 75.8
Ca_13324_v3 Cicer arietinum L. HOM05D003114 ORTHO05D003519 4.9e-84 315.8 219 76.3
BolC6t35330H Brassica oleracea HOM05D003114 ORTHO05D003519 2.5e-83 313.5 226 72.6
Glyma.17G246600 Glycine max HOM05D003114 ORTHO05D003519 3.2e-83 313.2 233 74.2
Medtr1g021680 Medicago truncatula HOM05D003114 ORTHO05D003519 7.1e-83 312.0 219 74.9
Phvul.007G175100 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 2.1e-82 310.5 219 74.9
arahy.Tifrunner.gnm1.ann1.06HR6X Arachis hypogaea HOM05D003114 ORTHO05D003519 4.6e-82 309.3 224 75.9
Glyma.09G114500 Glycine max HOM05D003114 ORTHO05D003519 4.6e-82 309.3 232 72.4
arahy.Tifrunner.gnm1.ann1.I3NIKD Arachis hypogaea HOM05D003114 ORTHO05D003519 7.9e-82 308.5 224 75.9
MBI16_g36197_MAGBIO Magnolia biondii HOM05D003114 ORTHO05D003519 7.9e-82 308.5 243 71.6
Psat6g010640 Pisum sativum HOM05D003114 ORTHO05D003519 7.9e-82 308.5 222 74.8
arahy.Tifrunner.gnm1.ann1.E8QAF1 Arachis hypogaea HOM05D003114 ORTHO05D003519 1.0e-81 308.1 219 75.3
arahy.Tifrunner.gnm1.ann1.SVX42N Arachis hypogaea HOM05D003114 ORTHO05D003519 1.0e-81 308.1 219 75.3
SalBow7G0889 Salvia bowleyana HOM05D003114 ORTHO05D003519 1.0e-81 308.1 221 75.6
HPP92_006943 Vanilla planifolia HOM05D003114 ORTHO05D003519 2.3e-81 307.0 219 74.9
ATR0733G144 Amborella trichopoda HOM05D003114 ORTHO05D003519 2.5e-80 303.5 220 70.9
Nn6g32175 Nelumbo nucifera HOM05D003114 ORTHO05D003519 3.3e-80 303.1 221 73.8
DCAR_020951 Daucus carota HOM05D003114 ORTHO05D003519 4.3e-80 302.8 228 71.1
vmacro04486 Vaccinium macrocarpon HOM05D003114 ORTHO05D003519 4.3e-80 302.8 219 73.1
Gohir.A05G260500 Gossypium hirsutum HOM05D003114 ORTHO05D003519 2.1e-79 300.4 220 69.5
Phvul.009G055500 Phaseolus vulgaris HOM05D003114 ORTHO05D003519 3.7e-79 299.7 219 73.5
HanXRQChr16g0507961 Helianthus annuus HOM05D003114 ORTHO05D003519 6.2e-79 298.9 220 71.4
DCAR_019495 Daucus carota HOM05D003114 ORTHO05D003519 1.8e-78 297.4 234 68.4
Lalb_Chr14g0368971 Lupinus albus HOM05D003114 ORTHO05D003519 1.5e-77 294.3 220 73.2
Os11g0276000 Oryza sativa ssp. japonica HOM05D003114 ORTHO05D003519 4.2e-75 286.2 222 64.4
HPP92_017781 Vanilla planifolia HOM05D003114 ORTHO05D003519 4.6e-74 282.7 221 69.7
HanXRQChr09g0268391 Helianthus annuus HOM05D003114 ORTHO05D003519 6.1e-74 282.3 221 68.8
unitig_899.g15621 Utricularia gibba HOM05D003114 ORTHO05D003519 1.1e-72 278.1 219 65.3
AUR62038454 Chenopodium quinoa HOM05D003114 ORTHO05D003519 4.3e-72 276.2 220 68.6
ECA232G2779 Erigeron canadensis HOM05D003114 ORTHO05D003519 1.4e-70 271.2 221 67.9
Prupe.1G385700 Prunus persica HOM05D003114 ORTHO05D003519 4.1e-70 269.6 219 68.9
TPR.G27771 Trifolium pratense HOM05D003114 ORTHO05D003519 4.1e-70 269.6 167 83.2
Zm00001eb051220 Zea mays HOM05D003114 ORTHO05D003519 9.0e-70 268.5 228 66.7
Ca_15530_v3 Cicer arietinum L. HOM05D003114 ORTHO05D003519 3.2e-67 260.0 219 66.7
Cfa018458 Carpinus fangiana HOM05D003114 ORTHO05D003519 5.5e-67 259.2 161 80.7
Os03g0625700 Oryza sativa ssp. japonica HOM05D003114 ORTHO05D003519 9.4e-67 258.5 228 64.9
CDE07G1354 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 3.0e-65 253.4 232 62.1
Ah.02g115920 Amaranthus hybridus HOM05D003114 ORTHO05D003519 1.5e-64 251.1 245 62.0
DCAR_019500 Daucus carota HOM05D003114 ORTHO05D003519 4.8e-63 246.1 165 75.2
Lsat_1_v5_gn_4_122960 Lactuca sativa HOM05D003114 ORTHO05D003519 3.8e-60 236.5 171 71.3
unitig_26.g9826 Utricularia gibba HOM05D003114 ORTHO05D003519 2.8e-55 220.3 139 80.6
Gohir.D05G262600 Gossypium hirsutum HOM05D003114 ORTHO05D003519 3.7e-55 219.9 234 54.7
Gorai.009G274500 Gossypium raimondii HOM05D003114 ORTHO05D003519 6.3e-55 219.2 234 55.1
SHI08196 Sapria himalayana HOM05D003114 ORTHO05D003519 3.1e-54 216.9 155 72.3
VMungo1309G2059 Vigna mungo HOM05D003114 ORTHO05D003519 4.1e-54 216.5 139 76.3
CAN.G389.2 Capsicum annuum HOM05D003114 ORTHO05D003519 1.5e-51 208.0 109 93.6
Mapoly0013s0072 Marchantia polymorpha HOM05D003114 ORTHO05D003519 3.3e-48 196.8 227 51.1
HPP92_006946 Vanilla planifolia HOM05D003114 ORTHO05D003519 9.7e-48 195.3 160 65.6
SMO117G0063 Selaginella moellendorffii HOM05D003114 ORTHO05D003519 2.2e-47 194.1 225 48.9
Nitab4.5_0000077g0080 Nicotiana tabacum HOM05D000801 ORTHO05D000007 8.2e-47 192.2 115 81.7
AagrBONN_evm.TU.Sc2ySwM_228.1666 Anthoceros agrestis HOM05D003114 ORTHO05D003519 5.3e-46 189.5 222 50.5
AagrBONN_evm.TU.Sc2ySwM_228.1675 Anthoceros agrestis HOM05D003114 ORTHO05D003519 5.3e-46 189.5 222 50.5
Pp3c11_22450 Physcomitrium patens HOM05D003114 ORTHO05D003519 3.8e-44 183.3 212 50.5
Zm00001eb168780 Zea mays HOM05D003114 ORTHO05D003519 1.4e-41 174.9 134 70.1
CDE04G0236 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 8.8e-41 172.2 224 48.7
SEGI_15002 Sequoiadendron giganteum HOM05D003114 ORTHO05D003519 4.9e-31 139.8 143 51.7
Nitab4.5_0000054g0050 Nicotiana tabacum HOM05D000801 ORTHO05D286452 1.4e-30 138.3 93 71.0
Sc07g0007470 Simmondsia chinensis HOM05D003114 ORTHO05D003519 5.4e-30 136.3 94 77.7
CBR_g48206 Chara braunii HOM05D003114 ORTHO05D003519 1.1e-27 128.6 229 39.3
Pp3c1_15530 Physcomitrium patens HOM05D003114 ORTHO05D003519 4.7e-26 123.2 233 38.2
CBR_g3845 Chara braunii HOM05D003114 ORTHO05D003519 3.0e-25 120.6 184 40.8
Pp3c11_16180 Physcomitrium patens HOM05D003114 ORTHO05D003519 3.4e-24 117.1 177 41.8
Glyma.09G114700 Glycine max HOM05D003114 ORTHO05D003519 5.2e-17 93.2 48 89.6
Cfa018460 Carpinus fangiana HOM05D003114 ORTHO05D003519 1.9e-14 84.7 60 80.0
CDE06G1192 Ceratophyllum demersum HOM05D003114 ORTHO05D003519 2.3e-09 67.8 140 40.0
Dinv42783 Davidia involucrata HOM05D003114 ORTHO05D003519 3.1e-09 67.4 45 82.2
Dinv43318 Davidia involucrata HOM05D000086 ORTHO05D000983 3.1e-09 67.4 45 82.2
SHI08193 Sapria himalayana HOM05D003114 ORTHO05D003519 1.5e-08 65.1 52 65.4
Cpa.g.sc64.34 Carica papaya HOM05D003114 ORTHO05D003519 7.5e-08 62.8 52 65.4


User provided reference genes

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