Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 0.0e+00 1790.8 908 100.0
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 0.0e+00 1598.9 876 92.9
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 0.0e+00 1284.6 871 76.2
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.1e-269 933.7 841 56.2
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 4.3e-247 858.6 859 52.5
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 1.6e-246 856.7 838 54.2
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 1.3e-238 830.5 841 51.6
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 6.3e-238 828.2 875 51.4
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 6.1e-233 811.6 887 49.0
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 1.0e-232 810.8 875 49.9
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 6.7e-232 808.1 875 49.6
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 4.3e-231 805.4 875 49.7
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 1.9e-226 790.0 866 49.1
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 1.9e-226 790.0 874 48.9
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 1.2e-225 787.3 867 48.3
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 1.6e-225 786.9 872 47.7
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.1e-225 786.6 845 49.2
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 2.7e-225 786.2 851 49.6
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 2.7e-225 786.2 867 48.3
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 3.6e-225 785.8 840 49.2
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 2.0e-223 780.0 872 47.8
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 4.4e-223 778.9 859 48.3
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 3.1e-221 772.7 854 48.2
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 9.1e-221 771.2 839 48.9
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 9.1e-221 771.2 841 48.8
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 6.5e-219 765.0 844 48.8
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 6.5e-219 765.0 888 47.5
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 1.1e-218 764.2 839 48.9
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.8e-216 756.9 843 48.9
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 3.0e-216 756.1 846 47.3
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 1.1e-215 754.2 892 46.1
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 3.7e-214 749.2 844 47.5
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 3.5e-212 742.7 888 48.5
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 3.5e-212 742.7 753 50.9
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 6.5e-211 738.4 865 45.5
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 6.5e-211 738.4 863 46.8
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 6.5e-211 738.4 839 47.4
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 1.1e-210 737.6 865 45.5
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 5.5e-210 735.3 844 46.6
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 2.7e-209 733.0 875 44.7
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 3.6e-209 732.6 844 47.9
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 3.0e-208 729.6 844 46.7
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 9.8e-207 724.5 866 45.4
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 9.8e-207 724.5 865 44.9
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 1.3e-206 724.2 868 45.7
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 1.7e-206 723.8 843 46.1
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 2.2e-206 723.4 846 46.8
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 1.1e-205 721.1 868 45.6
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 3.1e-205 719.5 859 45.8
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 4.5e-204 715.7 837 44.9
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 7.7e-204 714.9 857 45.4
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 1.3e-203 714.1 842 44.7
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.0e-203 712.2 865 44.2
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 8.5e-203 711.4 839 45.6
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 1.5e-202 710.7 831 46.6
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 3.6e-201 706.1 832 45.0
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 8.0e-201 704.9 865 45.0
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.4e-200 704.1 878 45.4
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 1.8e-200 703.7 914 43.4
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 3.0e-200 703.0 865 44.0
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 4.0e-200 702.6 844 46.1
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 6.8e-200 701.8 840 46.3
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 3.4e-199 699.5 920 42.9
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 4.4e-199 699.1 840 44.9
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 1.3e-198 697.6 846 44.6
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.7e-195 687.2 866 44.2
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 5.6e-194 682.2 864 42.8
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 1.5e-191 674.1 846 46.0
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 5.7e-191 672.2 845 45.3
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 1.4e-189 667.5 914 41.6
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 3.3e-186 656.4 847 42.5
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 7.3e-186 655.2 767 46.2
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 2.3e-184 650.2 851 43.1
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 5.2e-184 649.0 844 42.1
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.0e-180 637.1 878 41.8
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.7e-180 636.7 878 41.7
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 1.3e-179 634.4 851 42.2
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 2.3e-179 633.6 880 41.8
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 1.3e-171 607.8 839 41.8
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.7e-171 607.4 849 41.6
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.2e-166 590.5 894 39.9
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 6.4e-166 589.0 841 41.6
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.7e-163 580.9 858 39.9
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 1.9e-162 577.4 830 38.1
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 9.9e-159 565.1 853 40.7
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 1.9e-157 560.8 878 38.6
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 7.1e-157 558.9 843 38.7
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 9.3e-157 558.5 843 38.7
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 8.7e-155 552.0 900 36.9
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 3.3e-154 550.1 843 38.2
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 4.3e-154 549.7 843 38.1
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 5.6e-154 549.3 843 38.2
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.3e-153 548.1 671 44.1
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 1.5e-151 541.2 844 37.8
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 2.0e-151 540.8 897 36.7
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 3.4e-151 540.0 859 37.3
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 2.9e-150 537.0 881 37.9
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 4.2e-149 533.1 854 37.1
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 1.6e-148 531.2 839 37.2
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 3.5e-148 530.0 753 42.5
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 4.6e-148 529.6 740 39.2
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 1.3e-147 528.1 839 37.3
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.8e-147 527.7 1299 30.2
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 4.3e-146 523.1 839 36.1
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 2.0e-143 514.2 909 35.1
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.9e-142 510.4 515 52.2
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.9e-141 507.7 887 36.4
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 1.0e-131 475.3 872 36.1
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.3e-129 468.4 884 34.7
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 8.2e-129 465.7 1340 28.1
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 1.9e-125 454.5 572 45.8
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 4.2e-125 453.4 461 50.1
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 5.5e-125 453.0 850 34.9
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 2.9e-118 430.6 406 53.9
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 3.1e-104 384.0 653 36.3
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 7.2e-101 372.9 329 55.9
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.2e-98 365.5 440 46.1
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 9.4e-93 345.9 317 53.9
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 1.6e-87 328.6 306 52.6
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 3.5e-87 327.4 423 40.7
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 7.7e-87 326.2 1103 25.0
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 4.7e-84 317.0 791 28.8
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 3.5e-79 300.8 385 41.3
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 3.6e-76 290.8 362 45.3
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 4.7e-76 290.4 453 36.6
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 1.5e-74 285.4 357 43.1
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 3.4e-74 284.3 410 38.0
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 1.8e-72 278.5 816 27.1
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 2.3e-70 271.6 349 44.1
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.4e-67 262.3 377 41.1
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.3e-65 255.8 362 41.4
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 1.7e-65 255.4 275 48.4
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 6.2e-60 236.9 472 32.0
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 7.1e-56 223.4 178 56.7
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 3.5e-55 221.1 591 26.9
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.1e-54 217.2 498 30.7
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.1e-52 211.8 347 36.6
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 4.7e-52 210.7 175 59.4
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.4e-51 209.1 413 33.7
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 3.5e-47 194.5 250 41.6
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 9.0e-43 179.9 251 39.8
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 1.2e-39 169.5 358 31.3
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 1.0e-38 166.4 332 37.0
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 6.6e-38 163.7 120 62.5
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 1.9e-37 162.2 272 38.6
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.5e-34 152.5 133 54.9
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.2e-33 148.7 301 32.9
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 3.2e-32 144.8 184 47.3
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.7e-28 131.3 147 46.3
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 2.4e-27 128.6 101 60.4
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 6.9e-27 127.1 325 28.6
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 6.9e-27 127.1 157 41.4
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 1.3e-25 122.9 231 39.8
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.9e-25 121.7 88 68.2
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 4.9e-25 120.9 129 52.7
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 1.4e-24 119.4 82 72.0
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 5.5e-24 117.5 116 51.7
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 1.6e-23 115.9 125 49.6
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 3.5e-23 114.8 242 30.6
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 7.9e-23 113.6 81 61.7
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 7.9e-23 113.6 184 38.0
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 6.7e-22 110.5 135 44.4
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 3.3e-21 108.2 170 38.2
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 4.3e-21 107.8 80 58.8
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 4.9e-17 94.4 150 37.3
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 1.2e-15 89.7 209 34.0
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 3.0e-14 85.1 125 39.2
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 1.9e-13 82.4 140 32.1
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 1.8e-11 75.9 95 46.3
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 1.5e-10 72.8 103 39.8
Actinidia02458 Actinidia chinensis HOM05D003469 ORTHO05D004084 6.5e-09 67.4 67 58.2
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 6.5e-09 67.4 61 50.8
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 6.5e-09 67.4 124 32.3
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 5.5e-08 64.3 90 36.7


User provided reference genes

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