Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 3.4e-158 561.6 279 100.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.6e-144 516.2 283 92.6
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.4e-103 380.2 231 84.8
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 8.5e-85 317.8 206 72.8
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.6e-83 313.5 245 61.6
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 1.0e-82 310.8 205 71.7
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 8.7e-82 307.8 254 61.8
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.1e-81 307.4 229 67.7
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.9e-81 306.6 242 62.4
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 3.3e-81 305.8 200 72.5
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 9.7e-81 304.3 242 62.8
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 9.7e-81 304.3 242 62.8
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.3e-80 303.9 219 68.9
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 2.2e-80 303.1 243 62.6
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 3.7e-80 302.4 199 71.9
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 6.3e-80 301.6 221 65.2
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 2.4e-79 299.7 241 62.7
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 9.1e-79 297.7 244 61.9
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 1.5e-78 297.0 238 63.0
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 5.9e-78 295.0 205 68.3
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 5.9e-78 295.0 204 68.6
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 7.7e-78 294.7 213 66.2
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 7.7e-78 294.7 242 60.3
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 7.7e-78 294.7 242 60.3
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.3e-77 293.9 220 65.9
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.3e-77 293.9 234 62.0
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.7e-77 293.5 250 59.6
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.2e-77 293.1 203 68.5
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 2.9e-77 292.7 233 62.2
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 2.9e-77 292.7 250 59.6
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 8.5e-77 291.2 224 64.7
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.4e-76 290.4 186 70.4
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.4e-76 290.4 189 70.9
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 1.4e-76 290.4 215 65.6
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.4e-76 290.4 201 66.7
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 1.4e-76 290.4 230 60.9
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.9e-76 290.0 199 68.8
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 3.2e-76 289.3 233 62.7
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 3.2e-76 289.3 223 62.8
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 4.2e-76 288.9 189 70.4
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 4.2e-76 288.9 258 56.6
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 7.2e-76 288.1 195 68.7
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 9.4e-76 287.7 202 69.3
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 9.4e-76 287.7 226 64.6
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 1.2e-75 287.3 192 69.3
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 2.1e-75 286.6 227 61.7
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 2.7e-75 286.2 189 69.8
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.6e-75 285.8 193 69.4
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 6.1e-75 285.0 211 63.5
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 6.1e-75 285.0 213 63.8
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.0e-74 284.3 250 57.6
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.8e-74 283.5 189 69.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 3.0e-74 282.7 235 59.6
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.9e-74 282.3 205 64.9
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 3.9e-74 282.3 203 64.5
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 5.1e-74 282.0 199 67.8
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 8.8e-74 281.2 189 68.8
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 8.8e-74 281.2 211 64.0
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 1.5e-73 280.4 219 62.1
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 2.6e-73 279.6 248 57.3
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 4.4e-73 278.9 233 60.9
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 2.8e-72 276.2 213 61.0
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.1e-71 274.2 226 59.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.8e-71 273.5 184 68.5
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.7e-69 266.9 213 60.6
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 6.1e-67 258.5 266 53.4
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.0e-66 257.7 208 60.6
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.5e-65 253.8 237 57.0
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.3e-64 250.8 202 61.9
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.4e-63 247.3 194 63.4
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 5.9e-62 241.9 210 60.5
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 4.7e-59 232.3 193 55.4
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 1.8e-58 230.3 196 56.1
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 5.2e-58 228.8 197 57.4
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 8.2e-56 221.5 228 48.2
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 3.5e-54 216.1 228 49.6
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 5.9e-54 215.3 159 64.8
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.5e-52 210.7 192 54.2
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.6e-49 199.9 197 54.3
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 8.3e-48 194.9 174 58.6
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 1.1e-47 194.5 126 70.6
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.3e-45 186.8 133 67.7
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 6.3e-40 168.7 193 46.6
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 3.1e-39 166.4 218 42.2
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 4.1e-39 166.0 121 66.1
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 2.7e-38 163.3 95 73.7
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 9.8e-33 144.8 172 49.4
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.2e-27 125.6 80 72.5
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 8.9e-26 121.7 114 56.1
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 5.8e-25 119.0 111 55.9
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 9.8e-25 118.2 121 53.7
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 2.9e-24 116.7 198 36.9
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.3e-21 107.8 94 57.4
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.1e-11 73.9 61 57.4
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 4.0e-10 69.7 96 39.6
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 6.0e-06 55.8 159 28.3


User provided reference genes

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