Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002789g0040 Nicotiana tabacum HOM05D004725 ORTHO05D005683 1.2e-109 399.8 206 100.0
Nitab4.5_0000160g0190 Nicotiana tabacum HOM05D004725 ORTHO05D005683 5.6e-102 374.4 232 87.1
PGSC0003DMG400007347 Solanum tuberosum HOM05D004725 ORTHO05D005683 1.6e-101 372.9 224 87.9
Solyc11g065900.2 Solanum lycopersicum HOM05D004725 ORTHO05D005683 4.8e-101 371.3 224 87.9
Sopen11g025640 Solanum pennellii HOM05D004725 ORTHO05D005683 4.8e-101 371.3 224 87.9
Peaxi162Scf00057g02232 Petunia axillaris HOM05D004725 ORTHO05D005683 7.9e-96 354.0 233 81.1
Cc00_g03440 Coffea canephora HOM05D004725 ORTHO05D005683 1.7e-82 309.7 218 74.8
CAN.G598.3 Capsicum annuum HOM05D004725 ORTHO05D005683 1.4e-81 306.6 165 95.8
Oeu038772.1 Olea europaea HOM05D004725 ORTHO05D005683 3.5e-80 302.0 210 76.7
MSTRG.3853 Avicennia marina HOM05D004725 ORTHO05D005683 4.8e-77 291.6 224 70.5
Oeu001165.1 Olea europaea HOM05D004725 ORTHO05D005683 6.3e-77 291.2 248 66.5
DCAR_030461 Daucus carota HOM05D004725 ORTHO05D005683 8.2e-77 290.8 223 70.9
SalBow8G1743 Salvia bowleyana HOM05D004725 ORTHO05D005683 1.2e-75 287.0 224 69.2
SGA_v2.0_scaffold157G37322 Striga asiatica HOM05D004725 ORTHO05D005683 2.0e-75 286.2 224 69.6
Lj3A833G37 Lonicera japonica HOM05D004725 ORTHO05D005683 1.3e-74 283.5 225 68.9
Migut.G00073 Erythranthe guttata HOM05D004725 ORTHO05D005683 1.7e-74 283.1 224 69.2
Lsat_1_v5_gn_8_139661 Lactuca sativa HOM05D004725 ORTHO05D005683 2.7e-72 275.8 225 65.8
GSVIVG01034975001 Vitis vinifera HOM05D004725 ORTHO05D005683 4.6e-72 275.0 221 68.3
Nn3g21748 Nelumbo nucifera HOM05D004725 ORTHO05D005683 7.9e-72 274.2 222 66.7
CSS0037380 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 1.1e-70 270.4 225 65.8
unitig_37.g12782 Utricularia gibba HOM05D004725 ORTHO05D005683 4.8e-69 265.0 224 64.3
Dinv15152 Davidia involucrata HOM05D004725 ORTHO05D005683 1.1e-68 263.8 204 68.6
Actinidia31555 Actinidia chinensis HOM05D004725 ORTHO05D005683 9.1e-68 260.8 227 64.3
TAR376G0735 Trochodendron aralioides HOM05D004725 ORTHO05D005683 3.4e-67 258.8 224 63.8
Aqoxy6G02121 Aquilegia oxysepala HOM05D004725 ORTHO05D005683 1.3e-66 256.9 206 68.0
HanXRQChr17g0554971 Helianthus annuus HOM05D004725 ORTHO05D005683 3.8e-66 255.4 211 65.4
ECA236G4776 Erigeron canadensis HOM05D004725 ORTHO05D005683 5.0e-66 255.0 225 61.8
HanXRQChr10g0291591 Helianthus annuus HOM05D004725 ORTHO05D005683 5.0e-66 255.0 211 64.9
TPR.G27119 Trifolium pratense HOM05D004725 ORTHO05D005683 1.8e-63 246.5 228 59.2
Sc25g0003230 Simmondsia chinensis HOM05D004725 ORTHO05D005683 6.7e-63 244.6 224 60.7
Psat1g138600 Pisum sativum HOM05D004725 ORTHO05D005683 1.5e-62 243.4 219 59.8
CANSAT35G1772 Cannabis sativa HOM05D004725 ORTHO05D005683 2.0e-62 243.0 235 57.9
CDE02G0725 Ceratophyllum demersum HOM05D004725 ORTHO05D005683 2.0e-62 243.0 211 64.0
Lj3g0003769 Lotus japonicus HOM05D004725 ORTHO05D005683 2.6e-62 242.7 228 57.9
MBI18_g03518_MAGBIO Magnolia biondii HOM05D004725 ORTHO05D005683 3.3e-62 242.3 222 63.1
CiPaw.02G073900 Carya illinoinensis HOM05D004725 ORTHO05D005683 4.4e-62 241.9 217 59.4
Glyma.08G194400 Glycine max HOM05D004725 ORTHO05D005683 1.3e-61 240.4 226 61.1
SalBow6G0528 Salvia bowleyana HOM05D004725 ORTHO05D005683 4.8e-61 238.4 224 62.1
Os05g0143400 Oryza sativa ssp. japonica HOM05D004725 ORTHO05D005683 5.3e-60 235.0 202 63.4
Phvul.010G140100 Phaseolus vulgaris HOM05D004725 ORTHO05D005683 6.9e-60 234.6 223 58.7
vmacro08028 Vaccinium macrocarpon HOM05D004725 ORTHO05D005683 2.0e-59 233.0 236 57.2
CSS0018454 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 3.4e-59 232.3 217 59.9
PSO782G1146 Papaver somniferum HOM05D004725 ORTHO05D005683 4.5e-59 231.9 226 60.2
THA.LOC104827096 Tarenaya hassleriana HOM05D004725 ORTHO05D005683 7.7e-59 231.1 225 57.3
AL8G22680 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 1.0e-58 230.7 220 56.4
Zm00001eb108600 Zea mays HOM05D004725 ORTHO05D005683 2.9e-58 229.2 203 60.6
Carub.0008s0897 Capsella rubella HOM05D004725 ORTHO05D005683 5.0e-58 228.4 221 56.1
Ciclev10005849m.g Citrus clementina HOM05D004725 ORTHO05D005683 5.0e-58 228.4 222 57.2
VMungo0331G0107 Vigna mungo HOM05D004725 ORTHO05D005683 6.5e-58 228.0 223 58.3
AT5G49010 Arabidopsis thaliana HOM05D004725 ORTHO05D005683 1.4e-57 226.9 220 55.5
Carub.0008s0882 Capsella rubella HOM05D004725 ORTHO05D005683 3.2e-57 225.7 225 54.7
Potri.008G103800 Populus trichocarpa HOM05D004725 ORTHO05D005683 3.2e-57 225.7 220 58.2
PSO384G4206 Papaver somniferum HOM05D004725 ORTHO05D005683 4.2e-57 225.3 212 60.4
Sabra08G0078400 Salix brachista HOM05D004725 ORTHO05D005683 7.2e-57 224.6 220 57.3
Manes.03G206000 Manihot esculenta HOM05D004725 ORTHO05D005683 9.4e-57 224.2 216 57.9
PSO063G5877 Papaver somniferum HOM05D004725 ORTHO05D005683 9.4e-57 224.2 225 58.7
Haze_01314 Corylus avellana HOM05D004725 ORTHO05D005683 1.2e-56 223.8 160 70.0
Medtr2g044210 Medicago truncatula HOM05D004725 ORTHO05D005683 1.0e-55 220.7 172 65.1
QL06p012630 Quercus lobata HOM05D004725 ORTHO05D005683 1.0e-55 220.7 172 65.7
CARHR056790 Cardamine hirsuta HOM05D004725 ORTHO05D005683 3.0e-55 219.2 211 56.4
CsaV3_3G008790 Cucumis sativus L. HOM05D004725 ORTHO05D005683 3.0e-55 219.2 229 52.8
ClCG05G001400 Citrullus lanatus HOM05D004725 ORTHO05D005683 3.9e-55 218.8 224 54.5
SEGI_00745 Sequoiadendron giganteum HOM05D004725 ORTHO05D005683 3.9e-55 218.8 211 55.0
Thhalv10004892m.g Eutrema salsugineum HOM05D004725 ORTHO05D005683 5.2e-55 218.4 210 54.8
Dinv44275 Davidia involucrata HOM05D004725 ORTHO05D005683 6.7e-55 218.0 158 73.4
AL8G22360 Arabidopsis lyrata HOM05D004725 ORTHO05D005683 8.8e-55 217.6 237 51.9
Sp2g19380 Schrenkiella parvula HOM05D004725 ORTHO05D005683 1.1e-54 217.2 210 54.8
arahy.Tifrunner.gnm1.ann1.ASV3U0 Arachis hypogaea HOM05D004725 ORTHO05D005683 2.0e-54 216.5 257 50.2
Glyma.07G011200 Glycine max HOM05D004725 ORTHO05D005683 2.0e-54 216.5 167 68.3
Sed0009995 Sechium edule HOM05D004725 ORTHO05D005683 2.0e-54 216.5 224 54.0
Eucgr.D00314 Eucalyptus grandis HOM05D004725 ORTHO05D005683 9.7e-54 214.2 228 53.5
Aa31LG11G8130 Aethionema arabicum HOM05D004725 ORTHO05D005683 1.3e-53 213.8 210 54.8
COL.COLO4_34597 Corchorus olitorius HOM05D004725 ORTHO05D005683 2.2e-53 213.0 164 67.1
RcHm_v2.0_Chr4g0425721 Rosa chinensis HOM05D004725 ORTHO05D005683 2.2e-53 213.0 235 51.5
Rhsim04G0240300 Rhododendron simsii HOM05D004725 ORTHO05D005683 2.8e-53 212.6 251 52.6
BolC7t44486H Brassica oleracea HOM05D004725 ORTHO05D005683 6.3e-53 211.5 210 53.8
Gohir.A10G173400 Gossypium hirsutum HOM05D004725 ORTHO05D005683 6.3e-53 211.5 172 65.7
FvH4_4g13700 Fragaria vesca HOM05D004725 ORTHO05D005683 8.2e-53 211.1 233 51.9
A06p38630 Brassica napus HOM05D004725 ORTHO05D005683 1.4e-52 210.3 210 54.3
BraA06t26778Z Brassica rapa HOM05D004725 ORTHO05D005683 1.4e-52 210.3 210 54.3
Thecc.04G302700 Theobroma cacao HOM05D004725 ORTHO05D005683 1.4e-52 210.3 172 65.7
C07p39630 Brassica napus HOM05D004725 ORTHO05D005683 1.8e-52 209.9 210 54.3
Gorai.011G201500 Gossypium raimondii HOM05D004725 ORTHO05D005683 1.8e-52 209.9 172 65.1
Gohir.D10G179900 Gossypium hirsutum HOM05D004725 ORTHO05D005683 4.1e-52 208.8 172 65.1
COL.COLO4_09634 Corchorus olitorius HOM05D004725 ORTHO05D005683 5.3e-52 208.4 164 65.9
TWI09G0594 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 1.6e-51 206.8 222 55.0
Ca_09654_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 2.6e-51 206.1 181 61.9
Duzib212G0103 Durio zibethinus HOM05D004725 ORTHO05D005683 2.6e-51 206.1 158 66.5
Ah.13g071340 Amaranthus hybridus HOM05D004725 ORTHO05D005683 3.5e-51 205.7 196 57.7
Prupe.1G115500 Prunus persica HOM05D004725 ORTHO05D005683 5.9e-51 204.9 167 65.3
FAN07G1636 Fragaria x ananassa HOM05D004725 ORTHO05D005683 7.7e-51 204.5 235 51.1
GSVIVG01034912001 Vitis vinifera HOM05D004725 ORTHO05D005683 7.7e-51 204.5 203 59.1
ATR0691G022 Amborella trichopoda HOM05D004725 ORTHO05D005683 5.5e-49 198.4 151 68.9
BcaC06g30733 Brassica carinata HOM05D004725 ORTHO05D005683 2.1e-48 196.4 157 63.1
arahy.Tifrunner.gnm1.ann1.NMZ4WG Arachis hypogaea HOM05D004725 ORTHO05D005683 6.1e-48 194.9 177 59.3
Rhsim05G0134600 Rhododendron simsii HOM05D004725 ORTHO05D005683 6.1e-48 194.9 307 43.0
MD13G1151200 Malus domestica HOM05D004725 ORTHO05D005683 8.0e-48 194.5 214 54.2
SHI00123 Sapria himalayana HOM05D004725 ORTHO05D005683 3.0e-47 192.6 216 51.4
MELO3C006096.2 Cucumis melo HOM05D004725 ORTHO05D005683 5.2e-47 191.8 244 46.7
CAN.G327.11 Capsicum annuum HOM05D004725 ORTHO05D005683 1.2e-46 190.7 165 64.8
Atru.chr4.3042 Acer truncatum HOM05D004725 ORTHO05D005683 5.7e-46 188.3 138 68.8
PGR031G0191 Punica granatum HOM05D004725 ORTHO05D005683 5.7e-46 188.3 227 48.0
HPP92_027744 Vanilla planifolia HOM05D004725 ORTHO05D005683 5.7e-46 188.3 175 60.6
FAN12G0808 Fragaria x ananassa HOM05D004725 ORTHO05D005683 7.5e-46 188.0 234 49.1
SMO351G0117 Selaginella moellendorffii HOM05D004725 ORTHO05D005683 2.2e-45 186.4 209 49.3
BcaC06g30731 Brassica carinata HOM05D004725 ORTHO05D005683 2.4e-44 183.0 142 64.1
EL10Ac3g05524 Beta vulgaris HOM05D004725 ORTHO05D005683 3.8e-42 175.6 189 55.0
Ca_02282_v3 Cicer arietinum L. HOM05D004725 ORTHO05D005683 2.5e-41 172.9 129 69.8
Pp3c12_20580 Physcomitrium patens HOM05D004725 ORTHO05D005683 2.7e-40 169.5 229 43.7
CARHR182700 Cardamine hirsuta HOM05D004725 ORTHO05D005683 3.6e-40 169.1 187 49.7
AUR62039263 Chenopodium quinoa HOM05D004725 ORTHO05D005683 3.6e-40 169.1 226 45.6
Lalb_Chr20g0110441 Lupinus albus HOM05D004725 ORTHO05D005683 1.0e-39 167.5 112 74.1
Mapoly0029s0136 Marchantia polymorpha HOM05D004725 ORTHO05D005683 3.0e-39 166.0 222 43.7
Cpa.g.sc9.42 Carica papaya HOM05D004725 ORTHO05D005683 1.5e-38 163.7 161 58.4
AagrBONN_evm.TU.Sc2ySwM_228.2917 Anthoceros agrestis HOM05D004725 ORTHO05D005683 1.7e-37 160.2 215 42.3
FAN12G0673 Fragaria x ananassa HOM05D004725 ORTHO05D005683 1.7e-37 160.2 261 41.4
MD16G1152100 Malus domestica HOM05D004725 ORTHO05D005683 2.8e-37 159.5 164 55.5
Hma1.2p1_0013F.1_g008380 Hydrangea macrophylla HOM05D004725 ORTHO05D005683 2.3e-34 149.8 131 60.3
CBR_g34308 Chara braunii HOM05D004725 ORTHO05D005683 3.0e-31 139.4 213 36.2
FAN07G0549 Fragaria x ananassa HOM05D004725 ORTHO05D005683 3.5e-27 125.9 107 59.8
CSS0006068 Camellia sinensis var. sinensis HOM05D004725 ORTHO05D005683 2.3e-26 123.2 87 67.8
FAN22G2356 Fragaria x ananassa HOM05D004725 ORTHO05D005683 3.6e-24 115.9 92 63.0
HPP92_026067 Vanilla planifolia HOM05D004725 ORTHO05D005683 8.9e-23 111.3 110 58.2
Potri.010G147050 Populus trichocarpa HOM05D004725 ORTHO05D005683 2.0e-22 110.2 218 37.6
HPP92_026068 Vanilla planifolia HOM05D004725 ORTHO05D005683 2.6e-22 109.8 117 53.8
Lalb_Chr20g0115601 Lupinus albus HOM05D004725 ORTHO05D005683 4.4e-22 109.0 100 56.0
FvH4_4g20000 Fragaria vesca HOM05D004725 ORTHO05D005683 1.2e-19 100.9 162 42.0
MCO14G052 Micromonas commoda HOM05D004725 ORTHO05D005683 1.6e-19 100.5 213 34.3
Actinidia18458 Actinidia chinensis HOM05D004725 ORTHO05D005683 1.1e-15 87.8 57 73.7
Nitab4.5_0007792g0050 Nicotiana tabacum HOM05D004725 ORTHO05D005683 1.1e-15 87.8 91 58.2
RcHm_v2.0_Chr7g0210081 Rosa chinensis HOM05D004725 ORTHO05D005683 1.1e-15 87.8 99 47.5
AUR62016226 Chenopodium quinoa HOM05D004725 ORTHO05D005683 2.3e-15 86.7 200 37.5
Zm00001eb143530 Zea mays HOM05D004725 ORTHO05D005683 1.7e-13 80.5 87 54.0
Zm00001eb401350 Zea mays HOM05D004725 ORTHO05D005683 1.7e-13 80.5 87 54.0
Cre09.g393600 Chlamydomonas reinhardtii HOM05D004725 ORTHO05D005683 6.4e-13 78.6 172 33.7
TWI73G0983 Tripterygium wilfordii HOM05D004725 ORTHO05D005683 6.4e-13 78.6 66 62.1
RcHm_v2.0_Chr6g0255221 Rosa chinensis HOM05D004725 ORTHO05D005683 1.4e-12 77.4 84 54.8
CARHR287810 Cardamine hirsuta HOM05D004725 ORTHO05D005683 3.2e-12 76.3 162 38.3
Atru.chr3.3242 Acer truncatum HOM05D004725 ORTHO05D005683 2.0e-11 73.6 53 73.6
GSVIVG01034926001 Vitis vinifera HOM05D004725 ORTHO05D005683 3.3e-09 66.2 74 55.4
Zm00001eb228430 Zea mays HOM05D004725 ORTHO05D005683 4.3e-09 65.9 91 45.1
Zm00001eb417800 Zea mays HOM05D004725 ORTHO05D005683 6.8e-07 58.5 62 54.8
PRCOL_00004769 Prasinoderma coloniale HOM05D004725 ORTHO05D005683 8.9e-07 58.2 214 27.1


User provided reference genes

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