Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 8.4e-186 653.7 359 100.0
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 1.3e-170 603.2 361 92.5
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 1.4e-143 513.5 361 79.8
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 3.0e-143 512.3 377 76.7
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 3.9e-135 485.3 352 78.1
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 2.9e-114 416.0 368 68.8
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 1.9e-92 343.6 356 59.3
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 3.1e-87 326.2 372 59.1
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.2e-85 320.1 383 53.3
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 3.0e-82 309.7 293 62.8
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 5.6e-81 305.4 375 52.5
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 1.8e-79 300.4 285 62.5
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 3.1e-79 299.7 360 53.6
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.6e-78 296.6 371 55.0
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 7.5e-78 295.0 285 59.6
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 3.7e-77 292.7 284 59.9
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 9.2e-76 288.1 289 60.6
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 1.2e-75 287.7 281 61.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 3.5e-75 286.2 297 59.9
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.0e-74 284.6 302 56.0
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 2.3e-74 283.5 291 60.5
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 6.6e-74 282.0 291 58.8
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.1e-73 281.2 293 59.0
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 2.5e-73 280.0 361 53.2
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 4.3e-73 279.3 284 56.0
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 4.3e-73 279.3 248 63.7
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 9.5e-73 278.1 221 71.9
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 6.2e-72 275.4 300 58.0
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 1.4e-71 274.2 290 58.3
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 2.6e-70 270.0 286 55.9
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 3.4e-70 269.6 290 54.8
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 5.8e-70 268.9 357 52.4
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.7e-69 267.3 277 57.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.9e-68 263.8 287 56.1
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 4.2e-68 262.7 289 55.7
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 5.4e-68 262.3 366 49.2
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 7.1e-68 261.9 359 50.7
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 9.2e-68 261.5 295 57.3
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 9.2e-68 261.5 291 56.4
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 1.6e-67 260.8 293 55.6
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 2.1e-67 260.4 275 58.9
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 3.5e-67 259.6 319 53.6
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 7.8e-67 258.5 357 51.0
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 1.0e-66 258.1 282 55.3
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 1.0e-66 258.1 368 48.9
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.7e-66 257.3 286 55.6
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 2.3e-66 256.9 270 55.6
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 3.9e-66 256.1 364 49.5
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 3.9e-66 256.1 288 54.2
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.1e-66 255.8 278 57.6
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 6.6e-66 255.4 292 53.1
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 6.6e-66 255.4 351 48.4
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 1.5e-65 254.2 296 56.4
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.9e-65 253.8 278 57.2
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.9e-65 253.8 358 48.3
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 1.9e-65 253.8 291 55.7
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 7.3e-65 251.9 378 48.4
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 9.6e-65 251.5 274 55.5
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 1.3e-64 251.1 407 47.7
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 3.6e-64 249.6 289 54.3
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 4.8e-64 249.2 291 54.0
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.1e-63 248.1 288 52.8
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.8e-63 247.3 297 52.2
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 1.8e-63 247.3 309 50.5
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 3.1e-63 246.5 272 54.4
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 4.0e-63 246.1 299 51.2
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 1.2e-62 244.6 283 55.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 1.5e-62 244.2 293 54.6
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 2.0e-62 243.8 261 57.1
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 2.0e-62 243.8 287 51.9
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 2.6e-62 243.4 273 56.4
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.6e-62 243.4 271 54.2
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 4.4e-62 242.7 293 52.2
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.4e-62 242.7 307 53.1
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 7.6e-62 241.9 275 54.2
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 9.9e-62 241.5 261 56.7
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 3.8e-61 239.6 289 50.9
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 4.9e-61 239.2 375 48.8
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 4.9e-61 239.2 282 53.2
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 4.9e-61 239.2 261 54.4
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 7.1e-60 235.3 292 52.1
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 6.0e-59 232.3 496 37.5
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 3.9e-58 229.6 278 50.4
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.7e-58 228.4 307 51.1
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 1.1e-57 228.0 280 52.5
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 1.1e-57 228.0 365 43.8
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.5e-57 226.9 279 52.3
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 4.3e-57 226.1 364 47.3
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 8.1e-56 221.9 280 50.4
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 1.4e-55 221.1 273 51.6
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 2.6e-54 216.9 299 46.8
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 2.9e-53 213.4 208 60.1
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.1e-52 211.5 292 46.6
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.4e-52 211.1 196 63.3
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.9e-52 210.7 276 51.1
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 5.4e-52 209.1 284 48.9
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.6e-51 207.6 271 48.0
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 5.1e-50 202.6 227 54.2
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 2.4e-47 193.7 351 40.2
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 1.2e-46 191.4 336 41.4
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 4.5e-46 189.5 238 50.4
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 3.8e-45 186.4 415 36.6
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.1e-44 184.9 296 43.6
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 3.0e-42 176.8 265 47.5
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.4e-39 167.9 353 36.5
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.0e-38 164.1 301 40.2
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 2.6e-38 163.7 156 58.3
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.1e-33 148.3 247 40.9
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 2.2e-32 144.1 256 42.2
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 8.2e-32 142.1 289 42.9
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 4.1e-31 139.8 264 37.9
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 2.8e-24 117.1 294 35.4
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 3.7e-24 116.7 239 36.8
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 1.5e-22 111.3 162 44.4
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.2e-21 107.5 275 33.5
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.9e-21 107.1 127 52.8
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.1e-20 105.1 85 67.1
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.4e-18 98.2 295 30.8
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 1.8e-10 71.2 105 44.8
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 1.8e-10 71.2 217 31.3
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 3.3e-09 67.0 231 30.3
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 7.7e-06 55.8 198 33.3


User provided reference genes

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