Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.9e-123 445.3 233 100.0
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 5.2e-88 328.2 242 79.3
Peaxi162Scf00234g00811 Petunia axillaris HOM05D004189 ORTHO05D004092 2.5e-50 203.0 208 64.9
CAN.G166.11 Capsicum annuum HOM05D004189 ORTHO05D004092 9.7e-42 174.5 205 59.0
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 1.5e-39 167.2 203 56.7
Solyc01g009660.3 Solanum lycopersicum HOM05D004189 ORTHO05D004092 4.2e-37 159.1 203 55.2
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 1.7e-22 110.5 390 30.0
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 6.5e-22 108.6 388 30.7
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 1.4e-21 107.5 365 30.4
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 4.2e-21 105.9 383 30.3
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 6.7e-19 98.6 363 29.5
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 8.8e-19 98.2 366 29.5
PGSC0003DMG400030008 Solanum tuberosum HOM05D004189 ORTHO05D004092 3.7e-17 92.8 123 52.0
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 9.1e-16 88.2 376 27.4
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 1.2e-15 87.8 335 29.6
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 2.6e-15 86.7 314 29.0
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 8.5e-14 81.6 119 45.4
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 8.5e-14 81.6 307 28.0
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 2.5e-13 80.1 142 41.5
ClCG09G012920 Citrullus lanatus HOM05D004189 ORTHO05D004092 2.1e-12 77.0 240 32.1
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 2.1e-12 77.0 337 27.0
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 4.7e-12 75.9 120 43.3
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 4.7e-12 75.9 337 27.3
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 1.4e-11 74.3 171 37.4
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 1.4e-11 74.3 121 43.8
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 1.8e-11 73.9 342 26.9
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 2.3e-11 73.6 121 43.8
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 3.0e-11 73.2 176 36.4
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 4.0e-11 72.8 110 49.1
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 5.2e-11 72.4 117 42.7
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 1.2e-10 71.2 166 38.6
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 1.5e-10 70.9 135 40.7
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 2.6e-10 70.1 108 47.2
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 2.6e-10 70.1 115 41.7
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 4.4e-10 69.3 119 42.9
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 5.7e-10 68.9 172 35.5
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 5.7e-10 68.9 134 41.0
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 9.7e-10 68.2 114 42.1
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 9.7e-10 68.2 153 39.2
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 1.7e-09 67.4 113 42.5
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 2.2e-09 67.0 173 35.3
SGA_v2.0_scaffold60G21043 Striga asiatica HOM05D004189 ORTHO05D004092 2.8e-09 66.6 169 32.0
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 4.8e-09 65.9 180 33.9
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 4.8e-09 65.9 114 42.1
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 4.8e-09 65.9 135 38.5
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 8.2e-09 65.1 116 37.9
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 1.1e-08 64.7 175 32.0
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 1.4e-08 64.3 113 42.5
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.8e-08 63.9 354 24.9
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 2.4e-08 63.5 136 37.5
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 4.1e-08 62.8 119 39.5
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 5.3e-08 62.4 198 31.3
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 5.3e-08 62.4 121 42.1
SGA_v2.0_scaffold10G05341 Striga asiatica HOM05D026728 ORTHO05D004092 5.3e-08 62.4 192 28.6
DCAR_018199 Daucus carota HOM05D004189 ORTHO05D004092 9.1e-08 61.6 136 37.5
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 9.1e-08 61.6 171 31.0
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 2.0e-07 60.5 125 37.6
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 2.7e-07 60.1 178 32.6
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 2.7e-07 60.1 200 32.0
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 3.5e-07 59.7 160 31.2
Ah.07g207200 Amaranthus hybridus HOM05D032681 ORTHO05D004092 4.5e-07 59.3 155 36.1
MELO3C003321.2 Cucumis melo HOM05D004189 ORTHO05D004092 7.7e-07 58.5 261 28.4
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 1.3e-06 57.8 162 34.6
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 1.7e-06 57.4 188 30.3
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.7e-06 57.4 177 31.6
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 2.2e-06 57.0 158 32.9
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 2.2e-06 57.0 148 34.5
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 2.2e-06 57.0 175 33.7
SalBow4G1418 Salvia bowleyana HOM05D026728 ORTHO05D004092 2.9e-06 56.6 226 28.8
SalBow4G1950 Salvia bowleyana HOM05D026728 ORTHO05D004092 2.9e-06 56.6 226 28.8
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 3.8e-06 56.2 162 27.2
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 3.8e-06 56.2 161 33.5
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 5.0e-06 55.8 226 31.9
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 5.0e-06 55.8 100 46.0
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 6.5e-06 55.5 112 42.0
Glyma.16G192000 Glycine max HOM05D004189 ORTHO05D004092 6.5e-06 55.5 133 31.6
Psat6g199400 Pisum sativum HOM05D004189 ORTHO05D004092 6.5e-06 55.5 134 34.3
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.5e-06 55.1 102 35.3
FAN10G2376 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.5e-06 55.1 67 41.8
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.5e-06 55.1 67 41.8
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 8.5e-06 55.1 135 34.8


User provided reference genes

Program Settings