Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002709g0050 Nicotiana tabacum HOM05D008048 ORTHO05D010199 6.9e-221 770.4 402 100.0
Peaxi162Scf00033g00292 Petunia axillaris HOM05D008048 ORTHO05D010199 5.8e-119 431.8 402 61.9
PGSC0003DMG400017154 Solanum tuberosum HOM05D008048 ORTHO05D010199 3.6e-113 412.5 402 58.2
Sopen09g033500 Solanum pennellii HOM05D008048 ORTHO05D010199 6.9e-112 408.3 402 57.2
CAN.G220.87 Capsicum annuum HOM05D008048 ORTHO05D010199 1.1e-106 391.0 402 54.0
Hma1.2p1_0385F.1_g141480 Hydrangea macrophylla HOM05D008048 ORTHO05D010199 1.3e-78 297.7 401 43.1
Haze_11446 Corylus avellana HOM05D008048 ORTHO05D010199 3.3e-74 283.1 401 42.4
Cfa014771 Carpinus fangiana HOM05D008048 ORTHO05D010199 5.7e-74 282.3 401 42.4
MSTRG.4161 Avicennia marina HOM05D008048 ORTHO05D010199 5.3e-72 275.8 402 41.8
TAR362G0870 Trochodendron aralioides HOM05D008048 ORTHO05D010199 1.2e-71 274.6 401 39.7
Lsat_1_v5_gn_6_68700 Lactuca sativa HOM05D008048 ORTHO05D010199 5.9e-71 272.3 403 43.7
CAN.G220.88 Capsicum annuum HOM05D008048 ORTHO05D010199 5.5e-69 265.8 168 79.8
QL06p020732 Quercus lobata HOM05D008048 ORTHO05D010199 1.2e-68 264.6 400 40.5
Dinv29814 Davidia involucrata HOM05D008048 ORTHO05D010199 2.1e-68 263.8 373 43.2
MELO3C023035.2 Cucumis melo HOM05D008048 ORTHO05D010199 7.9e-68 261.9 401 40.4
Migut.G00487 Erythranthe guttata HOM05D008048 ORTHO05D010199 5.1e-67 259.2 402 38.8
Potri.010G067000 Populus trichocarpa HOM05D008048 ORTHO05D010199 1.1e-66 258.1 401 40.4
CsaV3_2G012520 Cucumis sativus L. HOM05D008048 ORTHO05D010199 1.5e-66 257.7 401 40.1
Sed0019169 Sechium edule HOM05D008048 ORTHO05D010199 2.6e-66 256.9 401 39.7
Sabra08G0130700 Salix brachista HOM05D008048 ORTHO05D010199 3.3e-66 256.5 402 40.8
Ciclev10005562m.g Citrus clementina HOM05D008048 ORTHO05D010199 4.4e-66 256.1 401 38.9
Potri.008G170900 Populus trichocarpa HOM05D008048 ORTHO05D010199 7.4e-66 255.4 402 40.3
Sabra10G0040500 Salix brachista HOM05D008048 ORTHO05D010199 1.3e-65 254.6 401 40.1
Atru.chr4.1935 Acer truncatum HOM05D008048 ORTHO05D010199 3.7e-65 253.1 398 39.9
Prupe.1G046300 Prunus persica HOM05D008048 ORTHO05D010199 4.8e-65 252.7 401 40.6
Nn1g02915 Nelumbo nucifera HOM05D008048 ORTHO05D010199 1.1e-64 251.5 401 38.2
SalBow3G4414 Salvia bowleyana HOM05D008048 ORTHO05D010199 1.8e-64 250.8 401 41.4
Actinidia20832 Actinidia chinensis HOM05D008048 ORTHO05D010199 9.1e-64 248.4 374 42.2
COL.COLO4_15948 Corchorus olitorius HOM05D008048 ORTHO05D010199 9.1e-64 248.4 401 38.9
Oeu002289.1 Olea europaea HOM05D008048 ORTHO05D010199 1.2e-63 248.1 211 60.2
MD13G1219500 Malus domestica HOM05D008048 ORTHO05D010199 3.4e-63 246.5 401 40.1
Sc25g0003600 Simmondsia chinensis HOM05D008048 ORTHO05D010199 1.0e-62 245.0 402 39.3
Solyc09g090560.2 Solanum lycopersicum HOM05D008048 ORTHO05D010199 2.9e-62 243.4 159 78.6
Ah.04g155360 Amaranthus hybridus HOM05D008048 ORTHO05D010199 5.0e-62 242.7 401 38.9
Lalb_Chr19g0128481 Lupinus albus HOM05D008048 ORTHO05D010199 1.1e-61 241.5 403 40.0
AUR62002183 Chenopodium quinoa HOM05D008048 ORTHO05D010199 4.2e-61 239.6 402 39.1
RcHm_v2.0_Chr4g0394961 Rosa chinensis HOM05D008048 ORTHO05D010199 1.0e-59 235.0 405 39.3
Manes.15G044600 Manihot esculenta HOM05D008048 ORTHO05D010199 1.4e-59 234.6 401 35.9
Phvul.007G271100 Phaseolus vulgaris HOM05D008048 ORTHO05D010199 3.9e-59 233.0 402 38.6
MD16G1225000 Malus domestica HOM05D008048 ORTHO05D010199 5.7e-58 229.2 401 38.7
Aqoxy5G00167 Aquilegia oxysepala HOM05D008048 ORTHO05D010199 1.3e-57 228.0 401 36.9
VMungo0720G0410 Vigna mungo HOM05D008048 ORTHO05D010199 2.2e-57 227.3 403 37.2
MBI07_g18713_MAGBIO Magnolia biondii HOM05D008048 ORTHO05D010199 8.2e-57 225.3 401 34.9
PGR004G1266 Punica granatum HOM05D008048 ORTHO05D010199 2.4e-56 223.8 405 38.3
Duzib151G0082 Durio zibethinus HOM05D008048 ORTHO05D010199 1.6e-55 221.1 401 35.9
Psat6g106440 Pisum sativum HOM05D008048 ORTHO05D010199 1.6e-55 221.1 389 37.5
Gorai.002G026300 Gossypium raimondii HOM05D008048 ORTHO05D010199 2.0e-55 220.7 402 36.3
Gohir.A01G025700 Gossypium hirsutum HOM05D008048 ORTHO05D010199 1.0e-54 218.4 402 36.1
TWI73G0695 Tripterygium wilfordii HOM05D008048 ORTHO05D010199 1.7e-54 217.6 406 36.5
Rhsim04G0173500 Rhododendron simsii HOM05D008048 ORTHO05D010199 2.9e-54 216.9 211 52.6
Gohir.D01G023415 Gossypium hirsutum HOM05D008048 ORTHO05D010199 1.5e-53 214.5 402 35.8
Medtr1g045060 Medicago truncatula HOM05D008048 ORTHO05D010199 7.2e-53 212.2 402 37.3
TPR.G28751 Trifolium pratense HOM05D008048 ORTHO05D010199 9.4e-53 211.8 386 36.8
SGA_v2.0_scaffold67G22704 Striga asiatica HOM05D008048 ORTHO05D010199 1.6e-52 211.1 184 58.7
Lj6g0004811 Lotus japonicus HOM05D008048 ORTHO05D010199 1.4e-51 208.0 402 37.8
FAN17G0666 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.3e-51 207.2 405 36.5
FvH4_4g04390 Fragaria vesca HOM05D008048 ORTHO05D010199 9.7e-50 201.8 388 35.8
FAN22G2321 Fragaria x ananassa HOM05D008048 ORTHO05D010199 9.7e-50 201.8 405 35.8
Thecc.04G262100 Theobroma cacao HOM05D008048 ORTHO05D010199 2.7e-44 183.7 197 52.3
Lj6P622T54 Lonicera japonica HOM05D008048 ORTHO05D010199 8.8e-43 178.7 159 57.9
Glyma.20G086000 Glycine max HOM05D008048 ORTHO05D010199 2.6e-42 177.2 378 34.9
DCAR_027338 Daucus carota HOM05D008048 ORTHO05D010199 1.4e-40 171.4 187 48.7
CiPaw.02G108000 Carya illinoinensis HOM05D008048 ORTHO05D010199 1.8e-40 171.0 401 33.7
GSVIVG01027901001 Vitis vinifera HOM05D008048 ORTHO05D010199 4.4e-34 149.8 173 49.7
Cpa.g.sc44.13 Carica papaya HOM05D008048 ORTHO05D010199 9.8e-34 148.7 175 46.9
ATR0736G121 Amborella trichopoda HOM05D008048 ORTHO05D010199 5.6e-29 132.9 173 42.8
FAN12G1007 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.4e-24 117.5 107 57.9
FAN12G3146 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.4e-24 117.5 107 57.9
EL10Ac3g04955 Beta vulgaris HOM05D008048 ORTHO05D010199 5.4e-24 116.3 111 54.1
FAN12G0723 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.2e-23 115.2 151 47.0
FAN12G2845 Fragaria x ananassa HOM05D008048 ORTHO05D010199 1.2e-23 115.2 151 47.0
Mapoly0103s0043 Marchantia polymorpha HOM05D007245 ORTHO05D009049 6.4e-17 92.8 215 30.7
Ca_11923_v3 Cicer arietinum L. HOM05D008048 ORTHO05D010199 1.1e-16 92.0 109 41.3
Thecc.04G050800 Theobroma cacao HOM05D007245 ORTHO05D009049 2.4e-16 90.9 185 29.7
Sopen05g004430 Solanum pennellii HOM05D007245 ORTHO05D009049 3.2e-16 90.5 208 29.8
ClCG05G012490 Citrullus lanatus HOM05D007245 ORTHO05D009049 7.0e-16 89.4 213 25.8
CsaV3_3G020030 Cucumis sativus L. HOM05D007245 ORTHO05D009049 9.2e-16 89.0 213 25.4
CAN.G1489.19 Capsicum annuum HOM05D007245 ORTHO05D009049 1.2e-15 88.6 185 27.6
Gohir.A11G062100 Gossypium hirsutum HOM05D007245 ORTHO05D009049 1.2e-15 88.6 208 31.2
PGSC0003DMG400030518 Solanum tuberosum HOM05D007245 ORTHO05D009049 1.2e-15 88.6 185 28.6
CSS0018621 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 1.6e-15 88.2 185 30.3
MELO3C014761.2 Cucumis melo HOM05D007245 ORTHO05D009049 1.6e-15 88.2 213 25.4
Duzib147G1224 Durio zibethinus HOM05D007245 ORTHO05D009049 1.6e-15 88.2 232 28.9
CSS0002235 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 2.0e-15 87.8 185 30.3
Oeu050155.1 Olea europaea HOM05D007245 ORTHO05D009049 3.5e-15 87.0 209 25.8
Prupe.7G011800 Prunus persica HOM05D007245 ORTHO05D009049 4.6e-15 86.7 186 29.6
Sed0008898 Sechium edule HOM05D007245 ORTHO05D009049 4.6e-15 86.7 205 26.3
MBI11_g03703_MAGBIO Magnolia biondii HOM05D007245 ORTHO05D009049 6.0e-15 86.3 216 29.6
Nn3g16217 Nelumbo nucifera HOM05D007245 ORTHO05D009049 6.0e-15 86.3 185 29.2
PSO017G6414 Papaver somniferum HOM05D007245 ORTHO05D009049 6.0e-15 86.3 189 30.2
Gohir.D11G065900 Gossypium hirsutum HOM05D007245 ORTHO05D009049 7.8e-15 85.9 181 32.0
Gorai.007G071400 Gossypium raimondii HOM05D007245 ORTHO05D009049 7.8e-15 85.9 181 32.0
PSO478G0086 Papaver somniferum HOM05D007245 ORTHO05D009049 7.8e-15 85.9 189 30.2
Actinidia37711 Actinidia chinensis HOM05D007245 ORTHO05D009049 1.0e-14 85.5 188 29.8
Aqoxy2G01225 Aquilegia oxysepala HOM05D007245 ORTHO05D009049 1.0e-14 85.5 205 28.3
CARHR199540 Cardamine hirsuta HOM05D007245 ORTHO05D009049 1.0e-14 85.5 211 24.6
Hma1.2p1_0421F.1_g149920 Hydrangea macrophylla HOM05D007245 ORTHO05D009049 1.0e-14 85.5 183 29.5
Sed0013025 Sechium edule HOM05D007245 ORTHO05D009049 1.0e-14 85.5 185 26.5
MSTRG.15573 Avicennia marina HOM05D007245 ORTHO05D009049 1.3e-14 85.1 187 26.2
Manes.11G073800 Manihot esculenta HOM05D007245 ORTHO05D009049 1.3e-14 85.1 185 26.5
ATR0582G351 Amborella trichopoda HOM05D007245 ORTHO05D009049 1.7e-14 84.7 206 29.1
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 1.7e-14 84.7 103 40.8
MD17G1004200 Malus domestica HOM05D007245 ORTHO05D009049 1.7e-14 84.7 206 31.6
Thhalv10014197m.g Eutrema salsugineum HOM05D007245 ORTHO05D009049 2.3e-14 84.3 211 25.1
Ah.03g136550 Amaranthus hybridus HOM05D001378 ORTHO05D001249 3.0e-14 84.0 190 31.1
RcHm_v2.0_Chr2g0176701 Rosa chinensis HOM05D007245 ORTHO05D009049 3.0e-14 84.0 186 28.5
TWI32G1326 Tripterygium wilfordii HOM05D007245 ORTHO05D009049 3.0e-14 84.0 185 27.6
TAR629G1424 Trochodendron aralioides HOM05D007245 ORTHO05D009049 3.0e-14 84.0 185 28.6
Cc09_g07550 Coffea canephora HOM05D007245 ORTHO05D009049 3.9e-14 83.6 184 32.1
Atru.chr6.2722 Acer truncatum HOM05D007245 ORTHO05D009049 5.0e-14 83.2 204 26.0
FvH4_6g31080 Fragaria vesca HOM05D007245 ORTHO05D009049 5.0e-14 83.2 184 32.1
SEGI_38415 Sequoiadendron giganteum HOM05D007245 ORTHO05D009049 6.6e-14 82.8 216 31.0
Aa31LG11G15470 Aethionema arabicum HOM05D007245 ORTHO05D009049 8.6e-14 82.4 190 32.1
Dinv25610 Davidia involucrata HOM05D007245 ORTHO05D009049 8.6e-14 82.4 205 28.3
AL6G24530 Arabidopsis lyrata HOM05D007245 ORTHO05D009049 1.1e-13 82.0 204 25.0
FAN05G2831 Fragaria x ananassa HOM05D007245 ORTHO05D009049 1.1e-13 82.0 209 29.7
SGA_v2.0_scaffold47G17641 Striga asiatica HOM05D007245 ORTHO05D009049 1.1e-13 82.0 219 27.9
AT5G13890 Arabidopsis thaliana HOM05D007245 ORTHO05D009049 1.5e-13 81.6 196 26.0
Lj7P619T29 Lonicera japonica HOM05D007245 ORTHO05D009049 1.9e-13 81.3 193 27.5
Dinv33262 Davidia involucrata HOM05D007245 ORTHO05D009049 2.5e-13 80.9 185 26.5
CDE06G2711 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 3.3e-13 80.5 215 27.9
MD09G1001100 Malus domestica HOM05D007245 ORTHO05D009049 3.3e-13 80.5 181 28.7
Sp6g30110 Schrenkiella parvula HOM05D007245 ORTHO05D009049 3.3e-13 80.5 219 25.1
HanXRQChr09g0245251 Helianthus annuus HOM05D007245 ORTHO05D009049 5.6e-13 79.7 223 26.5
QL02p068579 Quercus lobata HOM05D007245 ORTHO05D009049 5.6e-13 79.7 189 27.0
THA.LOC104822428 Tarenaya hassleriana HOM05D007245 ORTHO05D009049 7.3e-13 79.3 185 27.6
TAR374G0050 Trochodendron aralioides HOM05D000179 ORTHO05D009049 7.3e-13 79.3 207 27.5
Carub.0006s1208 Capsella rubella HOM05D007245 ORTHO05D009049 9.5e-13 79.0 196 25.0
Duzib187G0347 Durio zibethinus HOM05D007245 ORTHO05D009049 9.5e-13 79.0 185 27.6
DCAR_000961 Daucus carota HOM05D007245 ORTHO05D009049 1.2e-12 78.6 216 29.2
TPR.G31664 Trifolium pratense HOM05D007245 ORTHO05D009049 1.2e-12 78.6 97 40.2
Nitab4.5_0005411g0120 Nicotiana tabacum HOM05D007245 ORTHO05D009049 1.6e-12 78.2 185 27.0
PGR142G1730 Punica granatum HOM05D007245 ORTHO05D009049 2.1e-12 77.8 189 30.2
Nitab4.5_0005095g0010 Nicotiana tabacum HOM05D007245 ORTHO05D009049 2.8e-12 77.4 220 26.4
SHI23073 Sapria himalayana HOM05D000105 ORTHO05D000023 2.8e-12 77.4 183 27.9
CiPaw.03G000500 Carya illinoinensis HOM05D007245 ORTHO05D009049 3.6e-12 77.0 163 30.7
Phvul.001G099200 Phaseolus vulgaris HOM05D007245 ORTHO05D009049 3.6e-12 77.0 103 39.8
Rhsim08G0037800 Rhododendron simsii HOM05D007245 ORTHO05D009049 3.6e-12 77.0 233 24.9
SalBow7G3959 Salvia bowleyana HOM05D007245 ORTHO05D009049 3.6e-12 77.0 183 26.2
vmacro18400 Vaccinium macrocarpon HOM05D007245 ORTHO05D009049 6.2e-12 76.3 249 28.1
Haze_14957 Corylus avellana HOM05D007245 ORTHO05D009049 8.1e-12 75.9 186 25.8
Lsat_1_v5_gn_2_60460 Lactuca sativa HOM05D007245 ORTHO05D009049 8.1e-12 75.9 200 27.5
Oeu045577.1 Olea europaea HOM05D007245 ORTHO05D009049 8.1e-12 75.9 209 24.4
Pp3c4_3800 Physcomitrium patens HOM05D007245 ORTHO05D009049 8.1e-12 75.9 180 27.2
BcaC04g24245 Brassica carinata HOM05D007245 ORTHO05D009049 1.1e-11 75.5 206 27.7
Glyma.19G106200 Glycine max HOM05D007245 ORTHO05D009049 1.1e-11 75.5 189 30.7
Manes.04G095000 Manihot esculenta HOM05D007245 ORTHO05D009049 1.1e-11 75.5 112 31.2
unitig_0.g2407 Utricularia gibba HOM05D007245 ORTHO05D009049 1.1e-11 75.5 188 26.6
CANSAT64G0979 Cannabis sativa HOM05D007245 ORTHO05D009049 1.4e-11 75.1 241 28.2
Peaxi162Scf00950g00032 Petunia axillaris HOM05D007245 ORTHO05D009049 1.4e-11 75.1 210 26.2
RcHm_v2.0_Chr2g0137761 Rosa chinensis HOM05D007245 ORTHO05D009049 1.4e-11 75.1 184 29.9
A10p24470 Brassica napus HOM05D007245 ORTHO05D009049 2.3e-11 74.3 206 27.2
Pp3c8_3270 Physcomitrium patens HOM05D007245 ORTHO05D009049 3.1e-11 73.9 216 26.9
Potri.002G237200 Populus trichocarpa HOM05D007245 ORTHO05D009049 3.1e-11 73.9 185 25.4
BraA10t44512Z Brassica rapa HOM05D007245 ORTHO05D009049 4.0e-11 73.6 206 26.7
Lalb_Chr24g0402921 Lupinus albus HOM05D007245 ORTHO05D009049 4.0e-11 73.6 177 31.6
ECA238G1127 Erigeron canadensis HOM05D007245 ORTHO05D009049 5.2e-11 73.2 200 28.5
C09p63210 Brassica napus HOM05D007245 ORTHO05D009049 6.8e-11 72.8 206 27.2
BolC9t59157H Brassica oleracea HOM05D007245 ORTHO05D009049 6.8e-11 72.8 206 27.2
BcaC04g19069 Brassica carinata HOM05D007245 ORTHO05D009049 8.9e-11 72.4 206 27.2
Sabra02G0180800 Salix brachista HOM05D007245 ORTHO05D009049 8.9e-11 72.4 112 31.2
SGA_v2.0_scaffold34G13684 Striga asiatica HOM05D007245 ORTHO05D009049 8.9e-11 72.4 207 26.1
VMungo1383G3535 Vigna mungo HOM05D007245 ORTHO05D009049 1.5e-10 71.6 103 36.9
Ciclev10016068m.g Citrus clementina HOM05D007245 ORTHO05D009049 2.6e-10 70.9 183 26.8
SMO329G0038 Selaginella moellendorffii HOM05D007245 ORTHO05D009049 2.6e-10 70.9 199 25.1
Sc03g0005330 Simmondsia chinensis HOM05D007245 ORTHO05D009049 1.3e-09 68.6 182 28.6
TAR365G0106 Trochodendron aralioides HOM05D008048 ORTHO05D010199 1.3e-09 68.6 111 36.9
AUR62042868 Chenopodium quinoa HOM05D007245 ORTHO05D009049 2.2e-09 67.8 117 30.8
Ca_08230_v3 Cicer arietinum L. HOM05D007245 ORTHO05D009049 2.2e-09 67.8 96 36.5
Migut.K01486 Erythranthe guttata HOM05D007245 ORTHO05D009049 4.9e-09 66.6 213 23.5
Cpa.g.sc70.41 Carica papaya HOM05D007245 ORTHO05D009049 6.4e-09 66.2 217 26.7
Psat3g091920 Pisum sativum HOM05D007245 ORTHO05D009049 6.4e-09 66.2 84 36.9
Lj1g0022763 Lotus japonicus HOM05D007245 ORTHO05D009049 1.1e-08 65.5 92 38.0
Medtr7g084610 Medicago truncatula HOM05D007245 ORTHO05D009049 1.9e-08 64.7 88 38.6
AagrBONN_evm.TU.Sc2ySwM_369.440 Anthoceros agrestis HOM05D007245 ORTHO05D009049 3.2e-08 63.9 247 29.6
Pp3c10_19560 Physcomitrium patens HOM05D007245 ORTHO05D009049 3.2e-08 63.9 198 25.3
CDE02G4767 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 2.7e-07 60.8 203 24.6
EL10Ac2g03533 Beta vulgaris HOM05D001193 ORTHO05D001016 2.3e-06 57.8 138 29.7


User provided reference genes

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