Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 1.5e-225 785.8 386 100.0
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 2.1e-219 765.4 394 95.4
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 6.8e-210 733.8 388 92.3
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 2.6e-209 731.9 388 92.3
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 5.4e-207 724.2 381 92.7
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 9.3e-183 643.7 376 83.2
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 9.3e-183 643.7 376 83.2
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.8e-179 631.3 376 81.4
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 5.3e-178 627.9 368 82.3
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 2.0e-177 625.9 381 80.3
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 7.6e-177 624.0 378 79.9
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.0e-176 623.6 371 80.9
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 1.3e-176 623.2 371 80.9
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.7e-176 622.9 381 79.0
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 4.9e-176 621.3 377 79.8
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 6.5e-176 620.9 381 79.0
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 6.5e-176 620.9 382 81.2
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 1.4e-175 619.8 377 79.0
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 5.5e-175 617.8 371 79.2
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 7.1e-175 617.5 383 78.3
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 7.1e-175 617.5 383 78.3
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 1.2e-174 616.7 379 79.7
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 1.2e-174 616.7 373 80.4
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 1.2e-174 616.7 380 78.2
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 1.6e-174 616.3 369 81.0
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 2.1e-174 615.9 385 79.0
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 2.1e-174 615.9 375 79.7
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 2.7e-174 615.5 371 79.0
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 2.7e-174 615.5 377 78.5
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 2.7e-174 615.5 376 80.1
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 3.5e-174 615.1 379 78.6
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 6.0e-174 614.4 377 79.0
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 7.9e-174 614.0 370 80.3
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.0e-173 613.6 371 79.2
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 1.3e-173 613.2 372 79.0
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 1.8e-173 612.8 382 77.2
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.8e-173 612.8 371 79.5
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 3.9e-173 611.7 370 79.5
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 3.9e-173 611.7 380 76.6
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 3.9e-173 611.7 378 77.8
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 5.1e-173 611.3 372 78.0
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 5.1e-173 611.3 370 78.6
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 5.1e-173 611.3 370 79.7
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 6.7e-173 610.9 381 76.6
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 6.7e-173 610.9 375 78.7
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 1.1e-172 610.1 376 77.4
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 1.9e-172 609.4 380 77.9
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 5.7e-172 607.8 376 79.3
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 9.6e-172 607.1 391 75.4
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 4.8e-171 604.7 370 78.9
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 6.3e-171 604.4 375 77.9
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 8.2e-171 604.0 372 78.2
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 1.4e-170 603.2 374 77.3
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 3.1e-170 602.1 390 74.4
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 5.3e-170 601.3 370 79.5
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 9.0e-170 600.5 383 76.5
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.5e-169 599.7 370 78.4
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 2.0e-169 599.4 370 78.4
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 3.4e-169 598.6 370 78.1
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 4.5e-169 598.2 367 78.7
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.9e-169 597.8 370 77.6
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 7.6e-169 597.4 370 77.8
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.0e-168 597.0 372 76.1
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 1.3e-168 596.7 370 78.4
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 1.3e-168 596.7 370 78.4
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 1.3e-168 596.7 355 80.3
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.7e-168 596.3 373 76.4
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 2.2e-168 595.9 372 77.2
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 5.0e-168 594.7 385 74.5
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 6.5e-168 594.3 380 75.8
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 8.5e-168 594.0 384 76.3
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 1.9e-167 592.8 373 77.7
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 1.9e-167 592.8 372 77.4
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 2.5e-167 592.4 372 77.2
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 5.5e-167 591.3 372 77.4
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 1.2e-166 590.1 372 76.9
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 1.6e-166 589.7 372 76.9
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 4.6e-166 588.2 369 76.2
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 7.9e-166 587.4 373 75.9
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.3e-165 586.6 373 75.9
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 1.8e-165 586.3 375 76.0
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 2.3e-165 585.9 730 48.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 5.1e-165 584.7 386 74.9
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 5.1e-165 584.7 365 76.2
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 6.7e-165 584.3 393 73.5
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 1.5e-164 583.2 365 76.4
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 2.5e-164 582.4 365 77.0
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 3.3e-164 582.0 371 74.7
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 5.7e-164 581.3 378 74.6
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 5.7e-164 581.3 379 74.4
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 1.6e-163 579.7 369 77.2
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 1.6e-163 579.7 379 73.9
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.6e-163 579.7 357 78.2
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.2e-163 579.3 373 75.1
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 1.8e-162 576.2 373 75.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.1e-162 575.5 371 74.9
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 6.9e-162 574.3 370 76.2
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 3.4e-161 572.0 377 73.7
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 5.9e-161 571.2 374 74.9
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 3.8e-160 568.5 371 75.2
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 3.8e-160 568.5 389 71.0
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 2.7e-158 562.4 374 72.7
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 6.1e-158 561.2 373 72.7
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 1.8e-157 559.7 378 74.1
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 6.7e-157 557.8 372 72.8
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 8.8e-157 557.4 371 73.9
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.5e-156 556.6 380 72.4
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 2.4e-154 549.3 369 73.4
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 2.6e-153 545.8 376 71.0
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 1.7e-152 543.1 374 71.9
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 3.8e-152 542.0 371 71.2
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.4e-151 540.0 376 69.1
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 1.9e-151 539.7 375 71.7
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 2.5e-151 539.3 393 68.2
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 1.2e-150 537.0 391 67.8
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 2.1e-150 536.2 367 69.2
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 1.7e-147 526.6 445 62.0
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 2.4e-146 522.7 368 68.5
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.7e-144 516.5 365 69.3
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.7e-144 516.5 373 68.6
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 7.2e-143 511.1 313 78.9
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.2e-142 510.4 365 67.9
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.6e-142 510.0 368 68.8
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 1.6e-142 510.0 358 68.2
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 2.1e-142 509.6 364 67.6
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 6.7e-141 504.6 367 66.2
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.0e-136 490.7 294 80.3
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 2.9e-136 489.2 380 65.3
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 5.5e-135 485.0 408 61.3
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.6e-134 482.3 305 76.1
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 7.7e-129 464.5 363 61.7
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 5.2e-125 451.8 360 62.2
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 4.4e-124 448.7 377 61.5
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 5.9e-121 438.3 260 81.2
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.0e-118 427.9 349 58.7
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.9e-117 424.5 325 64.3
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.2e-107 393.3 276 68.5
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 2.9e-107 392.9 248 76.2
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 5.4e-106 388.7 352 57.7
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 1.3e-104 384.0 363 52.6
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 4.4e-100 369.0 233 77.7
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 9.2e-90 334.7 353 51.3
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 1.2e-89 334.3 270 62.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 2.7e-81 306.6 300 55.3
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 3.3e-79 299.7 211 70.1
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 1.0e-59 235.0 141 82.3
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 1.7e-46 191.0 133 72.9
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 2.8e-46 190.3 133 72.2
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 6.3e-46 189.1 133 72.2
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 6.5e-43 179.1 133 70.7
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 3.2e-42 176.8 129 69.0
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.2e-41 174.9 165 53.3
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 2.7e-41 173.7 109 78.0
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 6.7e-40 169.1 111 72.1
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 2.2e-38 164.1 97 80.4
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 8.5e-35 152.1 123 65.9
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.9e-34 151.0 111 68.5
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 3.6e-33 146.7 96 72.9
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 8.2e-30 135.6 142 53.5
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 2.3e-24 117.5 82 70.7
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 2.2e-22 110.9 71 71.8
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 6.3e-22 109.4 64 81.2
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 1.8e-21 107.8 64 75.0
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 2.2e-19 100.9 86 60.5
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 1.4e-16 91.7 71 63.4
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.4e-16 91.7 61 72.1
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 9.8e-15 85.5 75 57.3
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 7.0e-13 79.3 131 40.5
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 6.6e-11 72.8 50 64.0
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 4.0e-08 63.5 40 70.0
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 5.7e-07 59.7 34 85.3


User provided reference genes

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