Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 3.9e-235 817.8 422 100.0
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 3.0e-219 765.0 422 93.4
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 4.3e-197 691.4 422 82.0
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 1.2e-196 689.9 422 82.0
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 5.2e-187 657.9 383 88.5
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 1.1e-181 640.2 383 84.9
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 1.1e-165 587.0 411 71.5
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 2.5e-165 585.9 417 69.8
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 4.0e-163 578.6 377 75.3
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 1.1e-160 570.5 393 71.8
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 7.1e-160 567.8 372 73.9
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 2.1e-159 566.2 394 71.3
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.5e-157 560.1 388 71.1
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 7.3e-157 557.8 403 69.5
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 3.6e-156 555.4 389 71.7
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 8.1e-156 554.3 421 68.4
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 1.4e-155 553.5 401 69.3
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 5.3e-155 551.6 388 70.6
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 6.9e-155 551.2 395 68.9
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 9.0e-155 550.8 388 69.8
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 9.0e-155 550.8 410 67.6
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 1.2e-154 550.4 400 69.5
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 1.2e-154 550.4 396 68.7
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.2e-154 550.4 388 70.4
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 3.4e-154 548.9 378 71.2
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 3.4e-154 548.9 378 70.1
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 5.8e-154 548.1 417 66.2
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 5.8e-154 548.1 389 70.4
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 9.9e-154 547.4 383 70.2
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 2.2e-153 546.2 400 69.0
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 2.2e-153 546.2 390 70.3
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 2.9e-153 545.8 404 67.3
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 6.4e-153 544.7 404 66.6
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 6.4e-153 544.7 424 64.9
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 8.4e-153 544.3 385 69.6
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.9e-152 543.1 375 70.9
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.4e-152 542.7 420 64.8
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 2.4e-152 542.7 385 69.4
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 3.2e-152 542.3 408 66.2
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 5.4e-152 541.6 378 71.2
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 5.4e-152 541.6 387 69.0
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 9.3e-152 540.8 422 68.5
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 3.5e-151 538.9 389 69.2
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 4.6e-151 538.5 371 69.8
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.3e-150 537.0 385 68.8
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 3.0e-150 535.8 381 68.0
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 5.1e-150 535.0 411 64.7
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 6.7e-150 534.6 375 68.3
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 8.7e-150 534.3 400 66.0
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 8.7e-150 534.3 400 66.0
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 8.7e-150 534.3 402 66.4
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 1.1e-149 533.9 369 71.8
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 2.5e-149 532.7 419 64.2
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 5.6e-149 531.6 363 71.6
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 7.4e-149 531.2 374 68.4
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 7.4e-149 531.2 391 67.3
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 1.3e-148 530.4 420 65.5
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 1.6e-148 530.0 397 67.0
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 1.6e-148 530.0 370 70.3
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 2.1e-148 529.6 376 68.1
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 4.8e-148 528.5 403 66.0
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 8.1e-148 527.7 402 68.7
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 1.1e-147 527.3 415 63.1
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.4e-147 526.9 402 65.7
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 5.3e-147 525.0 364 71.2
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 5.3e-147 525.0 423 64.1
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.5e-146 523.5 370 69.2
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 2.0e-146 523.1 374 70.9
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 3.4e-146 522.3 425 62.1
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 4.9e-145 518.5 371 69.8
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 1.9e-144 516.5 366 69.9
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.9e-144 516.5 391 64.2
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.4e-144 516.2 381 67.5
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 5.5e-144 515.0 413 63.2
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 9.3e-144 514.2 385 67.8
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 3.5e-143 512.3 382 66.0
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 1.8e-142 510.0 438 59.1
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 2.3e-142 509.6 378 69.3
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 3.9e-142 508.8 392 67.3
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 6.7e-142 508.1 371 65.5
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 8.7e-142 507.7 410 62.7
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.3e-141 505.4 370 68.4
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 4.3e-141 505.4 370 68.4
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 7.4e-141 504.6 379 67.0
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 9.6e-141 504.2 379 67.0
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.6e-140 503.4 411 63.3
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 2.1e-140 503.1 376 67.0
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 2.1e-140 503.1 383 64.8
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 1.8e-139 500.0 409 61.9
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 3.1e-139 499.2 347 70.9
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 9.0e-139 497.7 390 64.4
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 1.7e-137 493.4 370 68.6
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 9.3e-136 487.6 395 62.3
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.1e-131 472.2 391 60.1
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 5.5e-128 461.8 363 63.1
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 3.6e-127 459.1 439 58.1
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 4.3e-125 452.2 369 61.5
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 3.8e-121 439.1 360 63.9
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.0e-118 431.0 368 59.5
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 3.9e-118 429.1 377 59.2
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 2.4e-115 419.9 377 56.2
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 7.7e-114 414.8 272 77.2
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 7.7e-114 414.8 377 58.1
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 3.2e-112 409.5 372 57.3
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.5e-112 408.7 389 53.7
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 5.5e-112 408.7 385 56.1
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 3.3e-109 399.4 391 51.9
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 5.9e-106 388.7 372 56.2
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.5e-101 374.0 379 51.5
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 2.0e-101 373.6 374 50.5
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 4.0e-94 349.4 319 57.1
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 9.8e-93 344.7 299 60.5
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.0e-89 332.4 389 46.3
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.6e-87 326.2 226 67.3
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 4.0e-86 322.8 314 54.1
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.2e-75 286.6 178 75.8
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.2e-75 286.6 178 75.8
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 9.2e-75 285.0 389 42.4
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 1.1e-62 245.0 391 41.2
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 9.5e-56 221.9 165 64.8
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 2.8e-55 220.3 444 36.7
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 4.4e-45 186.4 112 77.7
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.2e-37 161.8 415 33.5
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 2.0e-37 161.0 130 63.8
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.8e-36 156.8 134 59.7
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.6e-34 151.4 146 57.5
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 1.2e-26 125.2 82 73.2
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 1.0e-25 122.1 389 30.1
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 2.9e-12 77.4 76 55.3
Aa31LG1G18450 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.9e-09 67.0 73 49.3
Aa31sc2295G10 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.9e-09 67.0 73 49.3
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 6.7e-09 66.2 406 24.6
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 3.1e-06 57.4 310 23.5


User provided reference genes

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