Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 8.0e-126 453.8 225 100.0
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.5e-95 353.2 227 80.6
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.6e-71 270.8 223 70.4
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 3.4e-68 262.3 215 69.8
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 1.9e-66 256.5 175 78.3
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.6e-60 234.6 160 77.5
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 1.9e-58 229.9 241 58.9
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 5.4e-58 228.4 241 58.5
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 5.4e-58 228.4 241 58.5
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 5.4e-58 228.4 241 58.5
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 7.1e-58 228.0 241 58.5
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 1.2e-57 227.3 241 58.1
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 2.7e-57 226.1 214 60.3
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 2.3e-56 223.0 241 57.3
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 8.7e-56 221.1 241 57.3
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 5.6e-55 218.4 180 68.3
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 9.6e-55 217.6 227 56.8
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.6e-54 216.9 226 59.7
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 2.1e-54 216.5 226 57.5
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 2.6e-52 209.5 145 77.2
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.3e-51 207.2 132 84.1
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 1.1e-50 204.1 133 79.7
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 2.7e-49 199.5 134 80.6
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 3.0e-48 196.1 132 77.3
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 3.9e-48 195.7 133 76.7
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 4.3e-47 192.2 145 69.7
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 9.6e-47 191.0 131 77.9
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 8.1e-46 188.0 133 75.9
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-45 187.6 133 74.4
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 5.3e-45 185.3 145 71.7
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 3.8e-43 179.1 227 50.7
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 2.5e-42 176.4 145 65.5
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 5.5e-42 175.3 172 59.3
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 7.1e-42 174.9 158 63.9
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.1e-42 174.9 133 72.2
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 9.3e-42 174.5 128 73.4
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.7e-41 172.9 158 63.3
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 7.9e-41 171.4 152 64.5
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 1.8e-40 170.2 172 58.1
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 6.7e-40 168.3 108 83.3
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 1.5e-39 167.2 144 68.1
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 2.5e-39 166.4 154 62.3
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 3.1e-37 159.5 123 74.8
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 4.1e-37 159.1 132 68.9
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 5.9e-36 155.2 129 69.0
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-34 151.0 133 63.9
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-34 150.2 141 63.8
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 2.1e-33 146.7 130 67.7
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.8e-32 143.7 96 80.2
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 4.3e-31 139.0 115 67.8
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-30 137.5 136 60.3
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-30 137.1 115 67.0
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-30 137.1 126 61.9
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-29 134.4 109 69.7
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-29 134.4 109 69.7
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-29 134.4 109 69.7
CsaV3_UNG208180 Cucumis sativus L. HOM05D012309 ORTHO05D020467 1.5e-28 130.6 96 70.8
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 2.6e-28 129.8 155 52.3
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 3.4e-28 129.4 148 55.4
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 7.7e-28 128.3 106 66.0
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-27 127.9 95 71.6
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-27 125.9 105 65.7
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 8.5e-27 124.8 106 67.9
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 8.5e-27 124.8 106 67.9
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 8.5e-27 124.8 106 67.9
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 8.5e-27 124.8 106 67.9
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-26 122.9 106 67.0
Nitab4.5_0001152g0380 Nicotiana tabacum HOM05D012309 ORTHO05D011202 7.2e-26 121.7 80 78.8
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-25 120.9 103 64.1
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 2.1e-25 120.2 98 70.4
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-24 117.9 110 63.6
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 3.0e-24 116.3 116 56.9
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 8.8e-24 114.8 101 63.4
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 8.8e-24 114.8 121 59.5
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 2.0e-23 113.6 113 54.0
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-22 110.5 119 58.8
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-20 104.0 104 59.6
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 3.4e-20 102.8 144 53.5
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.3e-19 100.9 60 85.0
Nitab4.5_0020169g0010 Nicotiana tabacum HOM05D012309 ORTHO05D014791 1.7e-19 100.5 63 82.5
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-19 99.8 86 65.1
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 3.8e-19 99.4 82 62.2
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-19 99.4 122 50.8
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-18 97.4 89 62.9
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 4.2e-18 95.9 54 83.3
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 7.2e-18 95.1 85 62.4
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 3.6e-17 92.8 78 62.8
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 4.7e-17 92.4 104 55.8
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 7.9e-17 91.7 90 58.9
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 5.1e-16 89.0 112 50.9
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 3.3e-15 86.3 144 40.3
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 7.4e-15 85.1 101 50.5
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 2.8e-14 83.2 79 59.5
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 3.7e-14 82.8 56 76.8
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.4e-13 80.9 107 49.5
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.4e-13 80.9 107 49.5
ClCG11G007190 Citrullus lanatus HOM05D003467 ORTHO05D020467 2.4e-13 80.1 41 90.2
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.6e-12 77.4 102 48.0
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.6e-12 77.4 109 48.6
Nitab4.5_0004099g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.0e-12 77.0 58 70.7
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 2.6e-12 76.6 139 43.9
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-12 76.6 53 75.5
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-12 76.3 83 59.0
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 4.5e-12 75.9 72 59.7
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.3e-11 74.3 109 47.7
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-11 73.2 129 45.0
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.8e-11 72.8 43 81.4
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 5.0e-11 72.4 109 45.9
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 5.0e-11 72.4 129 45.0
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 6.5e-11 72.0 133 39.1
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.1e-10 71.2 99 46.5
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 4.2e-10 69.3 123 45.5
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 4.2e-10 69.3 132 37.1
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 4.2e-10 69.3 107 42.1
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 2.1e-09 67.0 133 38.3
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 2.7e-09 66.6 99 45.5
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 4.7e-09 65.9 101 45.5
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.7e-09 65.9 50 70.0
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 6.1e-09 65.5 132 38.6
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 3.0e-08 63.2 41 75.6
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 5.2e-08 62.4 124 37.1
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 1.1e-07 61.2 104 41.3
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 4.4e-07 59.3 109 35.8
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 5.7e-07 58.9 109 35.8
Lj2A1229T117 Lonicera japonica HOM05D003467 ORTHO05D020467 9.7e-07 58.2 46 67.4
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 1.7e-06 57.4 98 35.7
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 2.2e-06 57.0 67 47.8
MELO3C020548.2 Cucumis melo HOM05D003467 ORTHO05D004220 3.7e-06 56.2 41 70.7
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 4.8e-06 55.8 58 56.9


User provided reference genes

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